skip_on_os(c("mac", "solaris")) skip_if_not_installed("rms") skip_if_not_installed("emmeans") skip_if_not_installed("withr") withr::with_environment( new.env(), test_that("ggpredict, lrm", { data(efc, package = "ggeffects") efc$neg_c_7d <- as.numeric(efc$neg_c_7 > median(efc$neg_c_7, na.rm = TRUE)) d <- efc m1 <- rms::lrm(neg_c_7d ~ c12hour + e42dep + c161sex + c172code, data = d) pr <- ggpredict(m1, "c12hour", verbose = FALSE) expect_equal(pr$predicted[1], 0.4008948, tolerance = 1e-2) pr <- ggemmeans(m1, "c12hour", verbose = FALSE) expect_equal(pr$predicted[1], 0.4008948, tolerance = 1e-2) }) ) skip_if_not_installed("ggplot2") withr::with_environment( new.env(), test_that("ggpredict, lrm", { data(mpg, package = "ggplot2") mpg$cyl_ord <- ordered(mpg$cyl) fit <- rms::lrm(cyl_ord ~ hwy, data = mpg, tol = 1e-22) pr <- ggpredict(fit, "hwy", verbose = FALSE) expect_equal( pr$predicted[1:5], c(0.00131, 0.00021, 0.03213, 0.96635, 0.00327), tolerance = 1e-2 ) expect_named(pr, c("x", "predicted", "response.level", "group")) expect_identical( pr$response.level, c( "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8", "cyl_ord=4", "cyl_ord=5", "cyl_ord=6", "cyl_ord=8" ) ) }) )