.runThisTest <- Sys.getenv("RunAllggeffectsTests") == "yes" if (.runThisTest) { if (requiet("testthat") && requiet("ggeffects") && requiet("GLMMadaptive") && requiet("lme4")) { # fish <- read.csv("https://stats.idre.ucla.edu/stat/data/fish.csv") # fish$nofish <- as.factor(fish$nofish) # fish$livebait <- as.factor(fish$livebait) # fish$camper <- as.factor(fish$camper) data(fish) set.seed(123) m1 <- GLMMadaptive::mixed_model( count ~ child + camper, random = ~ 1 | persons, zi_fixed = ~ child + livebait, zi_random = ~ 1 | persons, data = fish, family = GLMMadaptive::zi.poisson() ) m2 <- GLMMadaptive::mixed_model( nofish ~ xb + zg, random = ~ 1 | persons, data = fish, family = binomial ) test_that("ggpredict", { # this test fails on osx, but not on windows skip_on_cran() set.seed(123) expect_warning(p <- ggpredict(m1, c("child", "camper"), type = "fe.zi")) expect_equal(p$predicted[1], 2.045537, tolerance = 1e-2) set.seed(123) p <- ggpredict(m1, c("child", "camper"), type = "re.zi", condition = c(count = 3.296)) expect_equal(p$predicted[1], 4.982773, tolerance = 1e-2) set.seed(123) p <- ggpredict(m1, c("child", "camper"), type = "re.zi", condition = c(count = 0)) expect_equal(p$predicted[1], 0.5115884, tolerance = 1e-2) }) test_that("ggemmeans", { set.seed(123) p <- ggemmeans(m1, c("child", "camper"), type = "fe.zi") expect_equal(p$predicted[1], 1.816723, tolerance = 1e-2) set.seed(123) p <- ggemmeans(m1, c("child", "camper"), type = "re.zi") expect_equal(p$predicted[1], 3.457011, tolerance = 1e-2) }) test_that("ggpredict", { expect_warning(expect_message(ggpredict(m1, c("child", "camper"), type = "fe"))) expect_warning(expect_message(ggpredict(m2, "zg", type = "fe.zi"))) }) } }