# Tests for lkj_marginal # # Author: mjskay ############################################################################### library(dplyr) library(distributional) test_that("log of dlkjcorr_marginal is correct", { x = ppoints(10) ref = dbeta((x + 1)/2, 3, 3, log = TRUE) - log(2) expect_equal(dlkjcorr_marginal(x, 4, 2, log = TRUE), ref) expect_equal(dlkjcorr_marginal(x, 4, 2, log = TRUE), log(dlkjcorr_marginal(x, 4, 2))) }) test_that("plkjcorr_marginal is correct", { x = ppoints(10) expect_equal(plkjcorr_marginal(x, 4, 2), pbeta((x + 1)/2, 3, 3)) expect_equal(plkjcorr_marginal(x, 2, 4), pbeta((x + 1)/2, 4, 4)) }) test_that("rlkjcorr_marginal is correct", { set.seed(1234) ref = rbeta(10, 3, 3) * 2 - 1 set.seed(1234) expect_equal(rlkjcorr_marginal(10, 4, 2), ref) }) test_that("lkjcorr_marginal throws an error for invalid K", { error_regex = "Correlation matrix dimension \\(K\\) must be an integer greater than or equal to 2" expect_error(lkjcorr_marginal_alpha(2.01, 4), error_regex) expect_error(lkjcorr_marginal_alpha(1, 4), error_regex) }) test_that("marginalize_lkjcorr works", { ref = as.data.frame(tibble( coef = c("a", "b"), prior = c("lkjcorr(3)", "lkjcorr(3)"), .dist = c("lkjcorr_marginal", "lkjcorr_marginal"), .args = list(list(2, 3), list(4, 3)), .dist_obj = dist_wrap(dist = "lkjcorr_marginal", c(2, 4), c(3, 3), package = "ggdist") )) expect_equal( data.frame(coef = c("a", "b"), prior = "lkjcorr(3)", stringsAsFactors = FALSE) %>% parse_dist(prior) %>% marginalize_lkjcorr(K = 2, coef == "a") %>% marginalize_lkjcorr(K = 4, coef == "b"), ref ) })