test_that("time ordered layout works", { testthat::skip_on_ci() testthat::skip_on_cran() coords <- time_ordered_coords(list( # time point 1 "a", # time point 2 c("b1", "b2"), # time point 3 c("c1", "c2", "c3"), # time point 4 "d" )) d1 <- dagify( d ~ c1 + c2 + c3, c1 ~ b1 + b2, c3 ~ a, b1 ~ a, coords = coords ) p1 <- ggdag(d1) auto_coords_coords <- dagify( d ~ c1 + c2 + c3, c1 ~ b1 + b2, c3 ~ a, b1 ~ a, coords = time_ordered_coords() ) # auto time ordering is the same expect_equal( coords2list(coords), dagitty::coordinates(auto_coords_coords) ) auto_coords_layout <- dagify( d ~ c1 + c2 + c3, c1 ~ b1 + b2, c3 ~ a, b1 ~ a ) # specifying in dagify or tidy_dagitty is the same expect_equal( tidy_dagitty(auto_coords_layout, layout = "time_ordered") %>% pull_dag_data(), tidy_dagitty(auto_coords_coords) %>% pull_dag_data() ) # or use a data frame x <- data.frame( name = c("x1", "x2", "y", "z1", "z2", "z3", "a"), time = c(1, 1, 2, 3, 3, 3, 4) ) p2 <- dagify( z3 ~ y, y ~ x1 + x2, a ~ z1 + z2 + z3, coords = time_ordered_coords(x) ) %>% ggdag() expect_doppelganger("list time ordered coords", p1) expect_doppelganger("df time ordered coords", p2) })