* using log directory 'd:/RCompile/CRANincoming/R-devel/ggVennDiagram.Rcheck' * using R Under development (unstable) (2025-06-20 r88332 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'ggVennDiagram/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'ggVennDiagram' version '1.5.4' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [16s] NOTE Maintainer: 'Chun-Hui Gao ' Size of tarball: 5040336 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ggVennDiagram' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from Rd file 'ggVennDiagram.Rd': ggVennDiagram Code: function(x, category.names = names(x), show_intersect = FALSE, set_color = "black", set_size = NA, label = c("both", "count", "percent", "none"), label_alpha = 0.5, label_font = "sans", label_bigInterval = 3L, label_bigMark = ",", label_geom = c("label", "text"), label_color = "black", label_size = NA, label_percent_digit = 0, label_txtWidth = 40, edge_lty = "solid", edge_size = 1, force_upset = FALSE, nintersects = 20, order.intersect.by = c("size", "name", "none"), order.set.by = c("size", "name", "none"), relative_height = 3, relative_width = 0.3, shape_id = NULL, ...) Docs: function(x, category.names = names(x), show_intersect = FALSE, set_color = "black", set_size = NA, label = c("both", "count", "percent", "none"), label_alpha = 0.5, label_geom = c("label", "text"), label_color = "black", label_size = NA, label_percent_digit = 0, label_txtWidth = 40, edge_lty = "solid", edge_size = 1, force_upset = FALSE, nintersects = 20, order.intersect.by = c("size", "name", "none"), order.set.by = c("size", "name", "none"), relative_height = 3, relative_width = 0.3, ...) Argument names in code not in docs: label_font label_bigInterval label_bigMark shape_id Mismatches in argument names (first 3): Position: 8 Code: label_font Docs: label_geom Position: 9 Code: label_bigInterval Docs: label_color Position: 10 Code: label_bigMark Docs: label_size Codoc mismatches from Rd file 'plot_venn.Rd': plot_venn Code: function(data, show_intersect = FALSE, set_color = "black", set_size = NA, label = "both", label_geom = "label", label_alpha = 0.5, label_font = "sans", label_color = "black", label_size = NA, label_percent_digit = 0, label_bigMark = ",", label_bigInterval = 3L, label_txtWidth = 40, edge_lty = "solid", edge_size = 1, ...) Docs: function(data, show_intersect = FALSE, set_color = "black", set_size = NA, label = "both", label_geom = "label", label_alpha = 0.5, label_color = "black", label_size = NA, label_percent_digit = 0, label_txtWidth = 40, edge_lty = "solid", edge_size = 1, ...) Argument names in code not in docs: label_font label_bigMark label_bigInterval Mismatches in argument names (first 3): Position: 8 Code: label_font Docs: label_color Position: 9 Code: label_color Docs: label_size Position: 10 Code: label_size Docs: label_percent_digit * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking R/sysdata.rda ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [10s] OK Running 'testthat.R' [10s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [24s] OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... OK * DONE Status: 1 WARNING, 1 NOTE