if (helper_skip()) { context("Test filtering of controller data") pmxClassHelpers <- test_pmxClass_helpers() test_that("individual plot: get all pages", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") p <- ctr %>% get_plot("individual") expect_equal(length(p), 5) }) test_that("individual plot: get single page", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") p <- ctr %>% get_plot("individual", 2) expect_true(inherits(p, "ggplot")) }) test_that("smooth_with_bloq result: smoothing with/wo BLOQ data", { ctr <- theophylline(bloq=pmx_bloq(cens="AGE0", limit="WT0")) p1 <- pmx_plot_abs_iwres_ipred(ctr, smooth_with_bloq=FALSE) p2 <- pmx_plot_abs_iwres_ipred(ctr, smooth_with_bloq=TRUE) p3 <- pmx_plot_abs_iwres_ipred(ctr) p1_obj <- ggplot2::ggplot_build(p1) p2_obj <- ggplot2::ggplot_build(p2) p3_obj <- ggplot2::ggplot_build(p3) expect_false(identical(p1_obj[["data"]][[4]], p2_obj[["data"]][[4]])) expect_identical(p1_obj[["data"]][[4]], p3_obj[["data"]][[4]]) }) test_that("individual plot: get some pages", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") p <- ctr %>% get_plot("individual", c(2, 4)) expect_equal(length(p), 2) }) test_that("individual plot : don't exceed the effective number of pages", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") p <- ctr %>% get_plot("individual", 1:100) expect_equal(length(p), 5) }) test_that("bloq data has separate colour", { ctr <- theophylline(bloq=pmx_bloq(cens="AGE0", limit="WT0")) plots_with_bloq <- c("individual", "abs_iwres_ipred", "abs_iwres_time", "iwres_ipred", "iwres_time", "npde_time", "npde_pred", "dv_pred", "dv_ipred") lapply( paste0("pmx_plot_", plots_with_bloq), function(x) {expect_equal("pink", get(x)(ctr)[["plot_env"]][["bloq"]][["colour"]])} ) }) test_that("can create a plot using setting dname", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") ctr %>% set_plot("DIS", pname = "distr1", type = "box", dname = "eta") p <- ctr %>% get_plot("distr1") pconf <- ggplot2::ggplot_build(p) expect_equal(length(pconf$plot$layers), 5) }) test_that("controller bloq parameters are applied to the plots", { ctr_no_bloq <- theophylline(bloq=pmx_bloq(cens="AGE0", limit="WT0", show=FALSE)) ctr_show_bloq <- theophylline(bloq=pmx_bloq(cens="AGE0", limit="WT0", show=TRUE)) plots_with_bloq <- c("individual", "abs_iwres_ipred", "abs_iwres_time", "iwres_ipred", "iwres_time", "npde_time", "npde_pred", "dv_pred", "dv_ipred") getFunBloq <- function(s, ctr) { get(paste0("pmx_plot_", s))(ctr)[["plot_env"]][["bloq"]] } lapply(plots_with_bloq, function(s) { expect_null(getFunBloq(s, ctr_no_bloq)) expect_false(is.null(getFunBloq(s, ctr_show_bloq))) }) }) test_that("Create a plot with not valid dname throw message", { ctr <- pmxClassHelpers$ctr expect_is(ctr, "pmxClass") expect_output( ctr %>% set_plot("DIS", pname = "distr1", type = "box", dname = "xxx"), "No data xxx provided for plot distr1" ) }) }