x <- c(0, 0, 0, 0, 4, 17, 10, 7, 1, 0, 1, 0, 0, 0) y <- c(0, 0, 0, 0, 4, 21, 31, 38, 39, 39, 40, 40, 40, 40) int <- 1:length(x) test_that("t50 works; Partial germination counts", { # From partial germination counts expect_equal(object = t50(germ.counts = x, intervals = int, method = "coolbear"), expected = 5.97058823529412, tolerance = 1e-12) expect_equal(object = t50(germ.counts = x, intervals = int, method = "farooq"), expected = 5.94117647058824, tolerance = 1e-12) }) test_that("t50 works; Cumulative germination counts", { # From cumulative germination counts expect_equal(object = t50(germ.counts = y, intervals = int, partial = FALSE, method = "coolbear"), expected = 5.97058823529412, tolerance = 1e-12) expect_equal(object = t50(germ.counts = y, intervals = int, partial = FALSE, method = "farooq"), expected = 5.94117647058824, tolerance = 1e-12) }) test_that("Identical results with Cumulative and Partial germination counts", { expect_identical(object = t50(germ.counts = x, intervals = int, method = "coolbear"), expected = t50(germ.counts = y, intervals = int, partial = FALSE, method = "coolbear")) expect_identical(object = t50(germ.counts = x, intervals = int, method = "farooq"), expected = t50(germ.counts = y, intervals = int, partial = FALSE, method = "farooq")) }) test_that("Identical results with multiple matches of Ni & Nj present", { y1 <- c(0 , 0 , 0 ,39 ,41, 41) int1 <- c(0, 1, 2, 3, 4, 5) y2 <- c( 0 , 0 ,39 ,41, 41) int2 <- c( 1, 2, 3, 4, 5) expect_identical(object = t50(germ.counts = y1, intervals = int1, partial = FALSE, method = "coolbear"), expected = t50(germ.counts = y2, intervals = int2, partial = FALSE, method = "coolbear")) expect_identical(object = t50(germ.counts = y1, intervals = int1, partial = FALSE, method = "farooq"), expected = t50(germ.counts = y2, intervals = int2, partial = FALSE, method = "farooq")) })