R Under development (unstable) (2024-05-08 r86528 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > test_check("geostan") Loading required package: geostan This is geostan version 0.6.1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.7 5 df location scale 1 10 0 3 lower upper 1 -1.7 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -1.4 5 location scale 1 -4.7 5 location scale 1 -1.4 5 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -1.4 5 location scale 1 0 5 global_scale slab_df slab_scale 1 1 15 0.63 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.760709 1 location scale 1 0.11 5 df location scale 1 10 0 3 lower upper 1 -1.8 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.2 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1.7 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.2 5 location scale 1 0 57 2 0 5 df location scale 1 10 0 3 lower upper 1 -1.7 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.2 5 location scale 1 0 5.0 2 0 5.6 3 0 5.0 4 0 5.0 df location scale 1 10 0 3 lower upper 1 -1.7 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -0.6761887 0.3471584 location scale 1 -4.2 5 location scale 1 0 5 df location scale 1 10 0 3 lower upper 1 -0.68 0.35 SAMPLING FOR MODEL 'foundation' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 0.000198 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 1.98 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: WARNING: No variance estimation is Chain 1: performed for num_warmup < 20 Chain 1: Chain 1: Iteration: 1 / 10 [ 10%] (Warmup) Chain 1: Iteration: 6 / 10 [ 60%] (Sampling) Chain 1: Iteration: 10 / 10 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 0.003 seconds (Warm-up) Chain 1: 0 seconds (Sampling) Chain 1: 0.003 seconds (Total) Chain 1: Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.7 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1.7 1 Range of permissible rho values: -1 1 location scale 1 0.014 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1 1 location scale 1 0.014 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 0.11 5 global_scale slab_df slab_scale 1 1 15 2 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 0.11 5 global_scale slab_df slab_scale 1 1 15 2 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 df location scale 1 10 0 3 global_scale slab_df slab_scale 1 1 15 1.6 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -4.7 5 location scale 1 0 5 df location scale 1 10 0 3 global_scale slab_df slab_scale 1 1 15 1.7 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -4.7 5 location scale 1 0 5 df location scale 1 10 0 3 global_scale slab_df slab_scale 1 1 15 1.7 location scale 1 -4.7 5 location scale 1 0 5 df location scale 1 10 0 3 global_scale slab_df slab_scale 1 1 15 1.7 location scale 1 0.11 5 location scale 1 0.11 5 df location scale 1 10 0 3 location scale 1 -4.2 5 location scale 1 0 5 2 0 5 location scale 1 -4.2 5 location scale 1 0 5 df location scale 1 10 0 3 location scale 1 -4.2 5 location scale 1 0 5 df location scale 1 10 0 3 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.2 5 location scale 1 0 5 df location scale 1 10 0 3 location scale 1 -4.2 5 location scale 1 0 5 df location scale 1 10 0 3 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -4.2 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 location scale 1 -4.2 5 location scale 1 0 15 df location scale 1 10 0 3 location scale 1 -4.2 5 location scale 1 0 15 2 0 5 df location scale 1 10 0 3 location scale 1 -0.019 5 location scale 1 0 5 df location scale 1 10 0 3 location scale 1 -0.019 5 location scale 1 0 5 df location scale 1 10 0 3 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 0.11 5 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 0.11 5 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 0.11 5 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -4.7 5 df location scale 1 10 0 3 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 location scale 1 -4.7 5 df location scale 1 10 0 3 location scale 1 -4.7 5 df location scale 1 10 0 3 Min. 1st Qu. Median Mean 3rd Qu. Max. 2.000 3.500 4.000 4.426 5.000 8.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 0.1250 0.1667 0.2000 0.2260 0.2500 0.5000 Range of permissible rho values: -1.760709 1 location scale 1 0.11 5 df location scale 1 10 0 3 lower upper 1 -1.8 1 Min. 1st Qu. Median Mean 3rd Qu. Max. 1.000 4.000 5.000 5.409 6.000 10.000 Min. 1st Qu. Median Mean 3rd Qu. Max. 1 1 1 1 1 1 Range of permissible rho values: -1.661134 1 location scale 1 -4.2 5 location scale 1 0 57 2 0 5 df location scale 1 10 0 3 lower upper 1 -1.7 1 Range of permissible rho values: -1 1 location scale 1 -0.013 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1 1 location scale 1 -0.013 5 location scale 1 0 5 2 0 5 df location scale 1 10 0 3 lower upper 1 -1 1 [ FAIL 0 | WARN 12 | SKIP 3 | PASS 50 ] ══ Skipped tests (3) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-sa-fns.R:4:5' • Run interactively to avoid crashing R session (1): 'test-for-bias.R:1:1' • Run interactively to avoid crashing R session. (1): 'test-rstan-conformity.R:2:1' [ FAIL 0 | WARN 12 | SKIP 3 | PASS 50 ] > > proc.time() user system elapsed 21.42 0.67 22.09