* using log directory 'd:/RCompile/CRANincoming/R-devel/genomicper.Rcheck'
* using R Under development (unstable) (2026-02-18 r89435 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-02-22 00:16:57 UTC
* checking for file 'genomicper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'genomicper' version '1.8'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Claudia Cabrera <c.cabrera@qmul.ac.uk>'

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  Genomicper (14:861)
  permutated (14:810)
  polymorphisms (14:230)
  pre (14:838)

Unknown, possibly misspelled, fields in DESCRIPTION:
  'Cabrera et al (2012) <doi'

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2026-02-21 as issues were not corrected
    despite reminders.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'genomicper' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Author field differs from that derived from Authors@R
  Author:    'Claudia P. Cabrera, Pau Navarro, Chris S.Haley'
  Authors@R: 'Claudia Cabrera [aut, cre], Pau Navarro [aut], Chris Haley [aut]'

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... NOTE
Found the following HTML validation problems:
genomicper.html:75:26 (NA:47): Warning: <doi:> attribute "/td" lacks value
genomicper.html:75:26 (NA:47): Error: <doi:> is not recognized!
genomicper.html:75:26 (NA:47): Warning: discarding unexpected <doi:>
* DONE
Status: 3 NOTEs