R version 4.6.0 RC (2026-04-17 r89914 ucrt) -- "Because it was There"
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Platform: x86_64-w64-mingw32/x64

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> library(testthat)
> library(genieBPC)
> 
> test_check("genieBPC")
! The OncoTree code inputted does not exist in the data and will be ignored. OncoTree codes will not be used to select a unique next generation sequencing panel for each patient.
[ FAIL 0 | WARN 0 | SKIP 32 | PASS 64 ]

══ Skipped tests (32) ══════════════════════════════════════════════════════════
• .is_connected_to_genie(pat = Sys.getenv("SYNAPSE_PAT")) is not TRUE (13):
  'test-check-genie-access.R:7:3', 'test-check-genie-access.R:16:3',
  'test-pull_data_synapse.R:4:3', 'test-pull_data_synapse.R:18:3',
  'test-pull_data_synapse.R:29:3', 'test-pull_data_synapse.R:139:3',
  'test-pull_data_synapse.R:246:3', 'test-set_synapse_credentials.R:6:3',
  'test-set_synapse_credentials.R:14:3', 'test-set_synapse_credentials.R:22:3',
  'test-set_synapse_credentials.R:30:3', 'test-synapse_version.R:3:3',
  'test-with-access-create_analytic_cohort.R:2:1'
• .is_connected_to_genie(pat = Sys.getenv("SYNAPSE_PAT_NO_TERMS")) is not TRUE
  (4): 'test-check-genie-access.R:48:3', 'test-check-genie-access.R:55:3',
  'test-pull_data_synapse.R:354:3', 'test-pull_data_synapse.R:376:3'
• .is_connected_to_genie(pat = Sys.getenv("SYNAPSE_PAT_PUBLIC")) is not TRUE
  (5): 'test-check-genie-access.R:27:3', 'test-check-genie-access.R:37:3',
  'test-pull_data_synapse.R:263:3', 'test-pull_data_synapse.R:323:3',
  'test-pull_data_synapse.R:338:3'
• .is_connected_to_genie(set_synapse_credentials(pat =
  Sys.getenv("SYNAPSE_PAT"))) is not TRUE (3): 'test-pull_data_synapse.R:95:3',
  'test-pull_data_synapse.R:179:3', 'test-pull_data_synapse.R:221:3'
• genieBPC:::.is_connected_to_genie() is not TRUE (7):
  'test-drug_regimen_sunburst.R:24:3', 'test-drug_regimen_sunburst.R:32:3',
  'test-drug_regimen_sunburst.R:44:3', 'test-drug_regimen_sunburst.R:52:3',
  'test-drug_regimen_sunburst.R:58:3', 'test-drug_regimen_sunburst.R:142:3',
  'test-select_unique_ngs.R:65:3'

[ FAIL 0 | WARN 0 | SKIP 32 | PASS 64 ]
> 
> proc.time()
   user  system elapsed 
   4.59    0.26    5.32