* installing *source* package ‘gdalBindings’ ... ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.15.0... yes checking the operating system name... Linux checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-18 -std=gnu++17 accepts -g... yes checking for clang++-18 -std=gnu++17 option to enable C++11 features... none needed checking for gdal... yes checking for gdal-config... /usr/bin/gdal-config configure: Using gdal-config at /usr/bin/gdal-config checking for gcc... clang-18 checking whether the compiler supports GNU C... yes checking whether clang-18 accepts -g... yes checking for clang-18 option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gdal.h... yes checking whether GDAL can be linked using only `pkg-config --libs gdal`... yes checking for proj... yes checking proj datadir path... /usr/share/proj checking whether PROJ can be ran using the datadir... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 18.1.5 (2)’ using C++ compiler: ‘Debian clang version 18.1.5 (2)’ if [ -n "/usr/share/proj" ]; then \ mkdir -p ../inst/proj;\ cp -R "/usr/share/proj" ../inst/;\ else \ echo "PROJ_DATADIR is empty. Skipping file copy.";\ fi; clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I/usr/include/gdal -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I/usr/include/gdal -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c rasterizeHDF.cpp -o rasterizeHDF.o In file included from rasterizeHDF.cpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ In file included from rasterizeHDF.cpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:69: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/Module.h:340: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/module/class.h:466:42: warning: delete called on non-final 'Rcpp::CppFinalizer' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] 466 | if( ptr->finalizer_pointer ) delete ptr->finalizer_pointer ; | ^ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/module/class.h:456:13: note: in instantiation of member function 'Rcpp::class_::SetFinalizer' requested here 456 | SetFinalizer( new FunctionFinalizer( f ) ) ; | ^ ./gdal_bindings.h:297:8: note: in instantiation of member function 'Rcpp::class_::finalizer' requested here 297 | .finalizer(&GDALDatasetFinalizer); | ^ 2 warnings generated. clang-18 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I/usr/include/gdal -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c registerDynamicSymbol.c -o registerDynamicSymbol.o clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o gdalBindings.so RcppExports.o rasterizeHDF.o registerDynamicSymbol.o -lgdal -lproj -L/home/hornik/tmp/R-d-clang-18/lib -lR installing to /srv/hornik/tmp/CRAN/gdalBindings.Rcheck/00LOCK-gdalBindings/00new/gdalBindings/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gdalBindings)