* installing *source* package ‘gdalBindings’ ... ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.15.0... yes checking for gcc... clang-17 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-17 accepts -g... yes checking for clang-17 option to enable C11 features... none needed checking for gdal... yes checking for gdal-config... yes ./configure: command substitution: line 3387: syntax error: unexpected end of file configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 17.0.6 (5)’ using C++ compiler: ‘Debian clang version 17.0.6 (5)’ clang++-17 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG -I/usr/include/gdal -DDLLEXPORT -D__STDC_FORMAT_MACROS -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c rasterizeHDF.cpp -o rasterizeHDF.o In file included from rasterizeHDF.cpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ In file included from rasterizeHDF.cpp:1: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:69: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/Module.h:340: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/module/class.h:466:42: warning: delete called on non-final 'Rcpp::CppFinalizer' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] 466 | if( ptr->finalizer_pointer ) delete ptr->finalizer_pointer ; | ^ /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/module/class.h:456:13: note: in instantiation of member function 'Rcpp::class_::SetFinalizer' requested here 456 | SetFinalizer( new FunctionFinalizer( f ) ) ; | ^ ./gdal.h:260:8: note: in instantiation of member function 'Rcpp::class_::finalizer' requested here 260 | .finalizer(&GDALDatasetFinalizer); | ^ 2 warnings generated. clang++-17 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG -I/usr/include/gdal -DDLLEXPORT -D__STDC_FORMAT_MACROS -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27: In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 26 | #define R_NO_REMAP | ^ :6:9: note: previous definition is here 6 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-17 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-17/lib -Wl,-O1 -o gdalBindings.so rasterizeHDF.o RcppExports.o -lgdal -lodbcinst -lssl -llzma -ldeflate -llz4 -larmadillo -lqhull_r -lgeotiff -ltiff -lheif -lzstd -laec -ljpeg -lpoppler -lpng -lgif -lnetcdf -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5_hl -lblosc -lcfitsio -lhdf5 -lcrypto -lpthread -lsz -ldl -lwebp -ldfalt -lmfhdfalt -lopenjp2 -lkmlbase -lkmldom -lkmlengine -lminizip -luriparser -lz -lfyba -lfygm -lfyut -lpcre2-8 -lspatialite -lsqlite3 -lxerces-c -lmysqlclient -lpq -lodbc -lfreexl -logdi -lexpat -lxml2 -lgeos_c -lcurl -lproj -ljson-c -lstdc++ -lm -L/home/hornik/tmp/R-d-clang-17/lib -lR installing to /srv/hornik/tmp/CRAN/gdalBindings.Rcheck/00LOCK-gdalBindings/00new/gdalBindings/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gdalBindings)