R Under development (unstable) (2024-03-10 r86088 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(gcplyr) ## ## gcplyr (Version 1.9.0, Build Date: 2024-03-11) ## See http://github.com/mikeblazanin/gcplyr for additional documentation ## Please cite software as: ## Blazanin, Michael. 2023. gcplyr: an R package for microbial growth ## curve data analysis. bioRxiv doi: 10.1101/2023.04.30.538883 ## > > test_check("gcplyr") Attaching package: 'dplyr' The following object is masked from 'package:testthat': matches The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union Attaching package: 'tidyr' The following object is masked from 'package:testthat': matches Loading required package: nlme Attaching package: 'nlme' The following object is masked from 'package:dplyr': collapse This is mgcv 1.9-1. For overview type 'help("mgcv-package")'. Loading required package: ggplot2 Loading required package: lattice Inferring nested_metadata to be TRUE Inferring nested_metadata to be TRUE Inferring nested_metadata to be TRUE Inferring nested_metadata to be TRUE block_name_location = 'filename' but there are multiple metadata entries. Putting block_names in filename and writing remaining metadata into file block_name_location = 'filename' but there are multiple metadata entries. Putting block_names in filename and writing remaining metadata into file block_name_location = 'filename' but there are multiple metadata entries. Putting block_names in filename and writing remaining metadata into file Inferring nested_metadata to be FALSE Inferring nested_metadata to be FALSE Inferring nested_metadata to be FALSE Inferring nested_metadata to be FALSE Inferring nested_metadata to be TRUE Joining with `by = join_by(time, Pop1, run)` Joining with `by = join_by(time, Pop1, run)` Joining with `by = join_by(time, fake_treat, run)` Joining with `by = join_by(time, run)` [ FAIL 0 | WARN 0 | SKIP 0 | PASS 327 ] > > #devtools::test() to run all tests > > proc.time() user system elapsed 18.04 1.45 16.89