library(unittest) library(gadget3) ok_group('edit.g3_r - Round-trip through an editor results in working code', { nll <- 0.0 model_fn <- g3_to_r(list(~{ nll <- g3_param('nll') return(nll) })) model_fn_n <- edit(model_fn, editor = '/bin/true') attr(model_fn_n, 'srcref') <- NULL attr(model_fn_n, 'srcfile') <- NULL ok(ut_cmp_identical( capture.output(str(model_fn)), capture.output(str(model_fn_n))), "str() output of 2 functions is the same") n <- runif(1) ok(ut_cmp_identical(n, model_fn(list(nll = n))), "Original function works") ok(ut_cmp_identical(n, model_fn_n(list(nll = n))), "Edited function works too") }) ok_group('print.g3_r', { cap <- function (x) { out <- capture.output(x) out[grepl("^<", out)] <- "<>" return(out) } model_fn <- g3_to_r(list( g3_formula( return(x + sum(y)), y = c(4, 5), x = g3_parameterized('parp') ))) ok(ut_cmp_identical(cap(print(model_fn)), c( "function (param) ", "{", " cur_time <- -1L", " stopifnot(\"parp\" %in% names(param))", " x <- param[[\"parp\"]]", " while (TRUE) {", " cur_time <- cur_time + 1L", " return(x + sum(y))", " }", "}", "<>", "<>", NULL)), "Default print output has code, no attributes") ok(ut_cmp_identical(cap(print(model_fn, with_environment = TRUE, with_template = TRUE)), c( "function (param) ", "{", " cur_time <- -1L", " stopifnot(\"parp\" %in% names(param))", " x <- param[[\"parp\"]]", " while (TRUE) {", " cur_time <- cur_time + 1L", " return(x + sum(y))", " }", "}", "<>", "<>", "Environment:", " $ y : num [1:2] 4 5", " $ reporting_enabled: int 1", "Parameter template:", " $ parp: num 0", NULL)), "Can add with_environment = TRUE, with_template = TRUE") }) ok_group("g3_to_r: attr.actions", { actions <- list( list("001" = ~{ 1 + 1 }, "002" = ~{2 + 2}), "003" = ~{3 + 3}) model_fn <- g3_to_r(actions) ok(ut_cmp_identical(attr(model_fn, 'actions'), actions), "actions returned as attribute uncollated") }) ok_group("g3_to_r: attr.parameter_template", { actions <- list( list("001" = ~{ 1 + 1 }, "002" = ~{2 + 2}), "003" = ~{3 + 3}) model_fn <- g3_to_r(actions) ok(ut_cmp_identical(attr(model_fn, 'parameter_template'), NULL), "Empty parameter template") actions <- list( "001" = ~{ 1 + 1 }, "002" = ~{g3_param('moo', value = 4) + g3_param('oink', value = 99)}, "003" = ~{3 + 3}) model_fn <- g3_to_r(actions) ok(ut_cmp_identical(attr(model_fn, 'parameter_template'), list(moo = 4, oink = 99)), "2 values populated") }) ok_group('g3_param', { param <- attr(g3_to_r(list(g3a_time(2000, 2004, project_years = 0), ~{ g3_param('a') # NB: We don't actually use optimise, but shouldn't error if it's there g3_param('b', value = 4, optimise = FALSE) })), 'parameter_template') ok(ut_cmp_identical( param[c('a', 'b')], list(a = 0, b = 4)), "Param list included value values") # Definitions-as-code should still parse g3_param()s (it's a different path to formulas) model_fn <- g3_to_r(list(g3_formula( return(y), y = quote( 2 + g3_param("peep") )))) ok(ut_cmp_identical(model_fn(list(peep = 4)), 6), "Unevaluated code had g3_param() resolved") }) ok_group('g3_param_table', { param <- attr(g3_to_r(list(g3a_time(2000, 2004, step_lengths = rep(3, times = 4), project_years = 0), ~{ g3_param_table('pt', expand.grid( # NB: We can use base R cur_year = seq(start_year, end_year), # NB: We can use g3a_time's vars cur_step = 2:3)) g3_param_table('pg', expand.grid( cur_year = start_year, # NB: We don't actually use optimise, but shouldn't error if it's there cur_step = 1:2), value = 4, optimise = FALSE) })), 'parameter_template') ok(ut_cmp_identical( param[c(paste('pt', 2000:2004, 2, sep = '.'), paste('pt', 2000:2004, 3, sep = '.'), 'pg.2000.1', 'pg.2000.2')], structure( as.list(c(rep(0, 5), rep(0, 5), rep(4, 2))), names = c( paste('pt', 2000:2004, 2, sep = '.'), paste('pt', 2000:2004, 3, sep = '.'), 'pg.2000.1', 'pg.2000.2'))), "Param table turned into multiple parameters, value set") params.in <- attr(g3_to_r(list( g3a_time(1990, 2000), g3_formula( quote(d), d = g3_parameterized('par.years', value = 0, by_year = TRUE, exponentiate = TRUE), x = NA) )), 'parameter_template') ok(ut_cmp_identical(grep('^par', names(params.in), value = TRUE), c( paste0('par.years.', 1990:2000, '_exp'), NULL)), "exponentiate prefix ends up at the end of parameters") })