* using log directory ‘/srv/hornik/tmp/CRAN/gRim.Rcheck’
* using R Under development (unstable) (2024-06-05 r86695)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.5 (2)
    Debian flang-new version 18.1.5 (2)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘gRim/DESCRIPTION’ ... OK
* this is package ‘gRim’ version ‘0.3.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [4s/4s] Note_to_CRAN_maintainers
Maintainer: ‘Søren Højsgaard <sorenh@math.aau.dk>’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘gRim’ can be installed ... [54s/54s] WARNING
Found the following significant warnings:
  grips_fit_ips.cpp:149:45: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:213:16: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:254:10: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:254:21: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ips.cpp:254:32: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:266:21: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:266:26: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:266:35: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:266:48: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:267:13: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:267:31: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:268:11: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:268:22: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ips.cpp:268:33: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:319:26: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:319:31: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:319:40: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:319:53: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:320:11: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:320:29: warning: explicitly assigning value of variable of type 'List' (aka 'Vector<19>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:321:8: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:321:21: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ips.cpp:321:35: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ips.cpp:322:14: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ips.cpp:322:35: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ips.cpp:323:19: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:154:24: warning: explicitly assigning value of variable of type 'size_t' (aka 'unsigned long') to itself [-Wself-assign]
  grips_fit_ncd.cpp:154:33: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:154:45: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:154:56: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:154:68: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:170:35: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:170:47: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:170:58: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:170:70: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:200:23: warning: explicitly assigning value of variable of type 'size_t' (aka 'unsigned long') to itself [-Wself-assign]
  grips_fit_ncd.cpp:200:28: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:200:36: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:200:46: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ncd.cpp:202:26: warning: explicitly assigning value of variable of type 'size_t' (aka 'unsigned long') to itself [-Wself-assign]
  grips_fit_ncd.cpp:202:35: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:202:52: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:202:63: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:202:75: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:203:26: warning: explicitly assigning value of variable of type 'size_t' (aka 'unsigned long') to itself [-Wself-assign]
  grips_fit_ncd.cpp:203:35: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:203:44: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:203:52: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:203:64: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:220:37: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:220:46: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:220:54: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:220:65: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:221:16: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:221:27: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
  grips_fit_ncd.cpp:221:38: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:271:29: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:271:38: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:271:46: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:271:59: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:271:72: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:272:14: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:272:41: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:272:62: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:272:78: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:275:29: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:275:38: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:275:46: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:275:59: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:275:72: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:276:14: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:276:41: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:276:62: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:276:78: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:318:31: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:318:40: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:318:48: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:318:61: warning: explicitly assigning value of variable of type 'umat' (aka 'Mat<unsigned int>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:318:74: warning: explicitly assigning value of variable of type 'mat' (aka 'Mat<double>') to itself [-Wself-assign-overloaded]
  grips_fit_ncd.cpp:318:85: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:319:15: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:319:36: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:320:10: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
  grips_fit_ncd.cpp:320:23: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
See ‘/srv/hornik/tmp/CRAN/gRim.Rcheck/00install.out’ for details.
* used C compiler: ‘Debian clang version 18.1.5 (2)’
* used C++ compiler: ‘Debian clang version 18.1.5 (2)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [14s/14s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [7s/7s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [2s/2s] OK
  Running ‘testhat.R’ [2s/2s]
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING