R Under development (unstable) (2024-07-28 r86931 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > source("incl/start.R") [17:28:42.534] plan(): Setting new future strategy stack: [17:28:42.536] List of future strategies: [17:28:42.536] 1. sequential: [17:28:42.536] - args: function (..., envir = parent.frame(), workers = "") [17:28:42.536] - tweaked: FALSE [17:28:42.536] - call: future::plan("sequential") [17:28:42.554] plan(): nbrOfWorkers() = 1 > > message("*** Non-exportable globals ...") *** Non-exportable globals ... > > options(future.debug = FALSE) > options(future.globals.onReference = "warning") > plan(cluster, workers = 1L) > > > message("* R connections ...") * R connections ... > > ## Create a dummy, global connection with a high enough connection index > ## such that it won't conflict with an existing connection index on the > ## worker. We use sink():s to "pad" with enough connections > tmp_file <- tempfile() > utils::capture.output(utils::capture.output({ + con <- file(tmp_file, open = "wb") + })) [1] "character(0)" > cat("hello\n", file = con) > flush(con) > bfr <- readLines(con = tmp_file) > print(bfr) [1] "hello" > stopifnot(bfr == "hello") > message(sprintf("Connection index of dummy 'con' connection: %d\n", as.integer(con))) Connection index of dummy 'con' connection: 6 > stopifnot(as.integer(con) >= 6) > > > message("- Run-time error") - Run-time error > > ## Assert we can detect the reference > res <- tryCatch({ + f <- future(cat("world\n", file = con), stdout = NA) + }, FutureWarning = identity) Timing stopped at: 0 0 0 > print(res) Future UUID: > stopifnot(inherits(res, "FutureWarning"), + grepl("non-exportable reference", conditionMessage(res))) > > f <- future({ + max <- max(getAllConnections(), na.rm = TRUE) + cat(sprintf("Max connection index on worker: %d\n", max)) + if (as.integer(con) <= max) { + warning(sprintf("TEST ERROR: Index of global 'con' is the same of an existing connection of the worker: %d in [0,%d]", as.integer(con), max)) + } + cat("world\n", file = con) + }) Warning: Detected a non-exportable reference ('externalptr') in one of the globals ('con' of class 'file') used in the future expression > res <- tryCatch({ + v <- value(f) + }, error = identity) Max connection index on worker: 5 > print(res) > stopifnot(inherits(res, "error")) > ## Nothing changed > bfr <- readLines(con = tmp_file) > print(bfr) [1] "hello" > stopifnot(bfr == "hello") > > close(con) > file.remove(tmp_file) [1] TRUE > > message("* R connections ... DONE") * R connections ... DONE > > > message("*** Non-exportable globals ... DONE") *** Non-exportable globals ... DONE > > source("incl/end.R") Failed to undo environment variables: - Expected environment variables: [n=205] '!ExitCode', 'ALLUSERSPROFILE', 'APPDATA', 'BIBINPUTS', 'BINDIR', 'BSTINPUTS', 'COMMONPROGRAMFILES', 'COMPUTERNAME', 'COMSPEC', 'CURL_CA_BUNDLE', 'CYGWIN', 'CommonProgramFiles(x86)', 'CommonProgramW6432', 'DriverData', 'HOME', 'HOMEDRIVE', 'HOMEPATH', 'JAGS_ROOT', 'JAVA_HOME', 'LANGUAGE', 'LC_COLLATE', 'LC_MONETARY', 'LC_TIME', 'LOCALAPPDATA', 'LOGONSERVER', 'LS_HOME', 'LS_LICENSE_PATH', 'MAKE', 'MAKEFLAGS', 'MAKELEVEL', 'MFLAGS', 'MSMPI_BENCHMARKS', 'MSMPI_BIN', 'MSYS2_ENV_CONV_EXCL', 'NUMBER_OF_PROCESSORS', 'OCL', 'OMP_THREAD_LIMIT', 'OS', 'PATH', 'PATHEXT', 'PROCESSOR_ARCHITECTURE', 'PROCESSOR_IDENTIFIER', 'PROCESSOR_LEVEL', 'PROCESSOR_REVISION', 'PROGRAMFILES', 'PROMPT', 'PSModulePath', 'PUBLIC', 'PWD', 'ProgramData', 'ProgramFiles(x86)', 'ProgramW6432', 'RTOOLS43_HOME', 'RTOOLS44_HOME', 'R_ARCH', 'R_BROWSER', 'R_BZIPCMD', 'R_CMD', 'R_COMPILED_BY', 'R_CRAN_WEB', 'R_CUSTOM_TOOLS_PATH', 'R_CUSTOM_TOOLS_SOFT', 'R_DOC_DIR', 'R_ENVIRON_USER', 'R_GSCMD', 'R_GZIPCMD', 'R_HOME', 'R_INCLUDE_DIR', 'R_INSTALL_TAR', 'R_LIBS', 'R_LIBS_SITE', 'R_LIBS_USER', 'R_MAX_NUM_DLLS', 'R_OSTYPE', 'R_PAPERSIZE', 'R_PAPERSIZE_USER', 'R_PARALLELLY_MAKENODEPSOCK_AUTOKILL', 'R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT', 'R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL', 'R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS', 'R_PARALLELLY_MAKENODEPSOCK_TIMEOUT', 'R_PARALLELLY_RANDOM_PORTS', 'R_PARALLEL_PORT', 'R_RD4PDF', 'R_RTOOLS44_PATH', 'R_SCRIPT_LEGACY', 'R_SHARE_DIR', 'R_TESTS', 'R_UNZIPCMD', 'R_USER', 'R_VERSION', 'R_ZIPCMD', 'SED', 'SHLVL', 'SYSTEMDRIVE', 'SYSTEMROOT', 'TAR', 'TAR_OPTIONS', 'TEMP', 'TERM', 'TEXINPUTS', 'TMP', 'TMPDIR', 'USERDOMAIN', 'USERDOMAIN_ROAMINGPROFILE', 'USERNAME', 'USERPROFILE', 'WINDIR', '_', '_R_CHECK_AUTOCONF_', '_R_CHECK_BOGUS_RETURN_', '_R_CHECK_BROWSER_NONINTERACTIVE_', '_R_CHECK_BUILD_VIGNETTES_SEPARATELY_', '_R_CHECK_CODETOOLS_PROFILE_', '_R_CHECK_CODE_ASSIGN_TO_GLOBALENV_', '_R_CHECK_CODE_ATTACH_', '_R_CHECK_CODE_CLASS_IS_STRING_', '_R_CHECK_CODE_DATA_INTO_GLOBALENV_', '_R_CHECK_CODE_USAGE_VIA_NAMESPACES_', '_R_CHECK_CODE_USAGE_WITHOUT_LOADING_', '_R_CHECK_CODE_USAGE_WITH_ONLY_BASE_ATTACHED_', '_R_CHECK_CODOC_VARIABLES_IN_USAGES_', '_R_CHECK_COMPACT_DATA2_', '_R_CHECK_COMPILATION_FLAGS_', '_R_CHECK_CONNECTIONS_LEFT_OPEN_', '_R_CHECK_CRAN_INCOMING_', '_R_CHECK_CRAN_INCOMING_CHECK_FILE_URIS_', '_R_CHECK_CRAN_INCOMING_CHECK_URLS_IN_PARALLEL_', '_R_CHECK_CRAN_INCOMING_NOTE_GNU_MAKE_', '_R_CHECK_CRAN_INCOMING_REMOTE_', '_R_CHECK_CRAN_INCOMING_USE_ASPELL_', '_R_CHECK_DATALIST_', '_R_CHECK_DEPRECATED_DEFUNCT_', '_R_CHECK_DOC_SIZES2_', '_R_CHECK_DOT_FIRSTLIB_', '_R_CHECK_DOT_INTERNAL_', '_R_CHECK_EXAMPLE_TIMING_THRESHOLD_', '_R_CHECK_EXECUTABLES_', '_R_CHECK_EXECUTABLES_EXCLUSIONS_', '_R_CHECK_FF_CALLS_', '_R_CHECK_FF_DUP_', '_R_CHECK_FORCE_SUGGESTS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_LEEWAY_', '_R_CHECK_HAVE_MYSQL_', '_R_CHECK_HAVE_ODBC_', '_R_CHECK_HAVE_PERL_', '_R_CHECK_HAVE_POSTGRES_', '_R_CHECK_INSTALL_DEPENDS_', '_R_CHECK_INTERNALS2_', '_R_CHECK_LENGTH_1_CONDITION_', '_R_CHECK_LICENSE_', '_R_CHECK_LIMIT_CORES_', '_R_CHECK_MATRIX_DATA_', '_R_CHECK_MBCS_CONVERSION_FAILURE_', '_R_CHECK_NATIVE_ROUTINE_REGISTRATION_', '_R_CHECK_NEWS_IN_PLAIN_TEXT_', '_R_CHECK_NO_RECOMMENDED_', '_R_CHECK_NO_STOP_ON_TEST_ERROR_', '_R_CHECK_ORPHANED_', '_R_CHECK_OVERWRITE_REGISTERED_S3_METHODS_', '_R_CHECK_PACKAGES_USED_IGNORE_UNUSED_IMPORTS_', '_R_CHECK_PACKAGES_USED_IN_TESTS_USE_SUBDIRS_', '_R_CHECK_PACKAGE_DATASETS_SUPPRESS_NOTES_', '_R_CHECK_PACKAGE_NAME_', '_R_CHECK_PKG_SIZES_', '_R_CHECK_PKG_SIZES_THRESHOLD_', '_R_CHECK_PRAGMAS_', '_R_CHECK_RD_EXAMPLES_T_AND_F_', '_R_CHECK_RD_LINE_WIDTHS_', '_R_CHECK_RD_MATH_RENDERING_', '_R_CHECK_RD_NOTE_LOST_BRACES_', '_R_CHECK_RD_VALIDATE_RD2HTML_', '_R_CHECK_REPLACING_IMPORTS_', '_R_CHECK_R_DEPENDS_', '_R_CHECK_S3_METHODS_SHOW_POSSIBLE_ISSUES_', '_R_CHECK_SCREEN_DEVICE_', '_R_CHECK_SERIALIZATION_', '_R_CHECK_SHLIB_OPENMP_FLAGS_', '_R_CHECK_SRC_MINUS_W_IMPLICIT_', '_R_CHECK_SUBDIRS_NOCASE_', '_R_CHECK_SUGGESTS_ONLY_', '_R_CHECK_SYSTEM_CLOCK_', '_R_CHECK_TESTS_NLINES_', '_R_CHECK_TEST_TIMING_', '_R_CHECK_TIMINGS_', '_R_CHECK_TOPLEVEL_FILES_', '_R_CHECK_UNDOC_USE_ALL_NAMES_', '_R_CHECK_UNSAFE_CALLS_', '_R_CHECK_URLS_SHOW_301_STATUS_', '_R_CHECK_VC_DIRS_', '_R_CHECK_VIGNETTES_NLINES_', '_R_CHECK_VIGNETTES_SKIP_RUN_MAYBE_', '_R_CHECK_VIGNETTE_TIMING_', '_R_CHECK_VIGNETTE_TITLES_', '_R_CHECK_WINDOWS_DEVICE_', '_R_CHECK_XREFS_NOTE_MISSING_PACKAGE_ANCHORS_', '_R_CHECK_XREFS_USE_ALIASES_FROM_CRAN_', '_R_CLASS_MATRIX_ARRAY_', '_R_DEPRECATED_IS_R_', '_R_S3_METHOD_LOOKUP_BASEENV_AFTER_GLOBALENV_', '_R_SHLIB_BUILD_OBJECTS_SYMBOL_TABLES_', '__R_CHECK_DOC_FILES_NOTE_IF_ALL_SPECIAL__', 'maj.version', 'nextArg--timingsnextArg--install' - Environment variables still there: [n=0] - Environment variables missing: [n=1] 'MAKEFLAGS' Differences environment variable by environment variable: List of 3 $ name : chr "MAKEFLAGS" $ expected: 'Dlist' chr "" $ actual : 'Dlist' chr NA > > proc.time() user system elapsed 0.43 0.23 1.53