R Under development (unstable) (2024-07-28 r86931 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > source("incl/start.R") [17:26:31.288] plan(): Setting new future strategy stack: [17:26:31.291] List of future strategies: [17:26:31.291] 1. sequential: [17:26:31.291] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.291] - tweaked: FALSE [17:26:31.291] - call: future::plan("sequential") [17:26:31.320] plan(): nbrOfWorkers() = 1 > > message("*** FutureRegistry() ...") *** FutureRegistry() ... > > for (where in c(sprintf("multicore-%s", future:::session_uuid()), "rscript")) { + message(sprintf("*** FutureRegistry('%s', 'list') ...", where)) + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) == 0L) + + + message(sprintf("*** FutureRegistry('%s', 'add') ...", where)) + f <- future({ 1 }) + print(f) + FutureRegistry(where, action = "add", future = f) + + + message(sprintf("*** FutureRegistry('%s', 'list') ...", where)) + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) == 1L) + + + message(sprintf("*** FutureRegistry('%s', 'remove') ...", where)) + FutureRegistry(where, action = "remove", future = f) + + + message(sprintf("*** FutureRegistry('%s', 'list') ...", where)) + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) == 0L) + + + message(sprintf("*** FutureRegistry('%s', 'add') ...", where)) + f <- future({ 2 }) + print(f) + FutureRegistry(where, action = "add", future = f) + + + message(sprintf("*** FutureRegistry('%s', 'list') ...", where)) + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) == 1L) + + + message(sprintf("*** FutureRegistry('%s', 'collect-first') ...", where)) + FutureRegistry(where, action = "collect-first") + + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) < 1L) + + message(sprintf("*** FutureRegistry('%s', 'add') ...", where)) + f <- future({ 2 }) + print(f) + FutureRegistry(where, action = "add", future = f) + + + message(sprintf("*** FutureRegistry('%s', 'reset') ...", where)) + FutureRegistry(where, action = "reset") + + + message(sprintf("*** FutureRegistry('%s', 'list') ...", where)) + futures <- FutureRegistry(where, action = "list") + print(futures) + stopifnot(length(futures) == 0L) + } *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'list') ... list() *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'add') ... [17:26:31.389] getGlobalsAndPackages() ... [17:26:31.390] Searching for globals... [17:26:31.396] - globals found: [1] '{' [17:26:31.396] Searching for globals ... DONE [17:26:31.396] Resolving globals: FALSE [17:26:31.397] [17:26:31.398] [17:26:31.398] getGlobalsAndPackages() ... DONE [17:26:31.399] run() for 'Future' ... [17:26:31.400] - state: 'created' [17:26:31.400] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.401] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.401] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.402] - Field: 'label' [17:26:31.402] - Field: 'local' [17:26:31.402] - Field: 'owner' [17:26:31.403] - Field: 'envir' [17:26:31.403] - Field: 'packages' [17:26:31.404] - Field: 'gc' [17:26:31.404] - Field: 'conditions' [17:26:31.404] - Field: 'expr' [17:26:31.405] - Field: 'uuid' [17:26:31.405] - Field: 'seed' [17:26:31.405] - Field: 'version' [17:26:31.406] - Field: 'result' [17:26:31.406] - Field: 'asynchronous' [17:26:31.406] - Field: 'calls' [17:26:31.407] - Field: 'globals' [17:26:31.407] - Field: 'stdout' [17:26:31.407] - Field: 'earlySignal' [17:26:31.408] - Field: 'lazy' [17:26:31.408] - Field: 'state' [17:26:31.408] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.408] - Launch lazy future ... [17:26:31.413] Packages needed by the future expression (n = 0): [17:26:31.414] Packages needed by future strategies (n = 0): [17:26:31.415] { [17:26:31.415] { [17:26:31.415] { [17:26:31.415] ...future.startTime <- base::Sys.time() [17:26:31.415] { [17:26:31.415] { [17:26:31.415] { [17:26:31.415] base::local({ [17:26:31.415] has_future <- base::requireNamespace("future", [17:26:31.415] quietly = TRUE) [17:26:31.415] if (has_future) { [17:26:31.415] ns <- base::getNamespace("future") [17:26:31.415] version <- ns[[".package"]][["version"]] [17:26:31.415] if (is.null(version)) [17:26:31.415] version <- utils::packageVersion("future") [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] version <- NULL [17:26:31.415] } [17:26:31.415] if (!has_future || version < "1.8.0") { [17:26:31.415] info <- base::c(r_version = base::gsub("R version ", [17:26:31.415] "", base::R.version$version.string), [17:26:31.415] platform = base::sprintf("%s (%s-bit)", [17:26:31.415] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.415] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.415] "release", "version")], collapse = " "), [17:26:31.415] hostname = base::Sys.info()[["nodename"]]) [17:26:31.415] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.415] info) [17:26:31.415] info <- base::paste(info, collapse = "; ") [17:26:31.415] if (!has_future) { [17:26:31.415] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.415] info) [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.415] info, version) [17:26:31.415] } [17:26:31.415] base::stop(msg) [17:26:31.415] } [17:26:31.415] }) [17:26:31.415] } [17:26:31.415] ...future.strategy.old <- future::plan("list") [17:26:31.415] options(future.plan = NULL) [17:26:31.415] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.415] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.415] } [17:26:31.415] ...future.workdir <- getwd() [17:26:31.415] } [17:26:31.415] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.415] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.415] } [17:26:31.415] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.415] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.415] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.415] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.415] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.415] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.415] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.415] base::names(...future.oldOptions)) [17:26:31.415] } [17:26:31.415] if (FALSE) { [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] if (TRUE) { [17:26:31.415] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.415] open = "w") [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.415] windows = "NUL", "/dev/null"), open = "w") [17:26:31.415] } [17:26:31.415] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.415] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.415] base::sink(type = "output", split = FALSE) [17:26:31.415] base::close(...future.stdout) [17:26:31.415] }, add = TRUE) [17:26:31.415] } [17:26:31.415] ...future.frame <- base::sys.nframe() [17:26:31.415] ...future.conditions <- base::list() [17:26:31.415] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.415] if (FALSE) { [17:26:31.415] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.415] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.415] } [17:26:31.415] ...future.result <- base::tryCatch({ [17:26:31.415] base::withCallingHandlers({ [17:26:31.415] ...future.value <- base::withVisible(base::local({ [17:26:31.415] 1 [17:26:31.415] })) [17:26:31.415] future::FutureResult(value = ...future.value$value, [17:26:31.415] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.415] ...future.rng), globalenv = if (FALSE) [17:26:31.415] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.415] ...future.globalenv.names)) [17:26:31.415] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.415] }, condition = base::local({ [17:26:31.415] c <- base::c [17:26:31.415] inherits <- base::inherits [17:26:31.415] invokeRestart <- base::invokeRestart [17:26:31.415] length <- base::length [17:26:31.415] list <- base::list [17:26:31.415] seq.int <- base::seq.int [17:26:31.415] signalCondition <- base::signalCondition [17:26:31.415] sys.calls <- base::sys.calls [17:26:31.415] `[[` <- base::`[[` [17:26:31.415] `+` <- base::`+` [17:26:31.415] `<<-` <- base::`<<-` [17:26:31.415] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.415] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.415] 3L)] [17:26:31.415] } [17:26:31.415] function(cond) { [17:26:31.415] is_error <- inherits(cond, "error") [17:26:31.415] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.415] NULL) [17:26:31.415] if (is_error) { [17:26:31.415] sessionInformation <- function() { [17:26:31.415] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.415] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.415] search = base::search(), system = base::Sys.info()) [17:26:31.415] } [17:26:31.415] ...future.conditions[[length(...future.conditions) + [17:26:31.415] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.415] cond$call), session = sessionInformation(), [17:26:31.415] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.415] signalCondition(cond) [17:26:31.415] } [17:26:31.415] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.415] "immediateCondition"))) { [17:26:31.415] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.415] ...future.conditions[[length(...future.conditions) + [17:26:31.415] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.415] if (TRUE && !signal) { [17:26:31.415] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.415] { [17:26:31.415] inherits <- base::inherits [17:26:31.415] invokeRestart <- base::invokeRestart [17:26:31.415] is.null <- base::is.null [17:26:31.415] muffled <- FALSE [17:26:31.415] if (inherits(cond, "message")) { [17:26:31.415] muffled <- grepl(pattern, "muffleMessage") [17:26:31.415] if (muffled) [17:26:31.415] invokeRestart("muffleMessage") [17:26:31.415] } [17:26:31.415] else if (inherits(cond, "warning")) { [17:26:31.415] muffled <- grepl(pattern, "muffleWarning") [17:26:31.415] if (muffled) [17:26:31.415] invokeRestart("muffleWarning") [17:26:31.415] } [17:26:31.415] else if (inherits(cond, "condition")) { [17:26:31.415] if (!is.null(pattern)) { [17:26:31.415] computeRestarts <- base::computeRestarts [17:26:31.415] grepl <- base::grepl [17:26:31.415] restarts <- computeRestarts(cond) [17:26:31.415] for (restart in restarts) { [17:26:31.415] name <- restart$name [17:26:31.415] if (is.null(name)) [17:26:31.415] next [17:26:31.415] if (!grepl(pattern, name)) [17:26:31.415] next [17:26:31.415] invokeRestart(restart) [17:26:31.415] muffled <- TRUE [17:26:31.415] break [17:26:31.415] } [17:26:31.415] } [17:26:31.415] } [17:26:31.415] invisible(muffled) [17:26:31.415] } [17:26:31.415] muffleCondition(cond, pattern = "^muffle") [17:26:31.415] } [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] if (TRUE) { [17:26:31.415] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.415] { [17:26:31.415] inherits <- base::inherits [17:26:31.415] invokeRestart <- base::invokeRestart [17:26:31.415] is.null <- base::is.null [17:26:31.415] muffled <- FALSE [17:26:31.415] if (inherits(cond, "message")) { [17:26:31.415] muffled <- grepl(pattern, "muffleMessage") [17:26:31.415] if (muffled) [17:26:31.415] invokeRestart("muffleMessage") [17:26:31.415] } [17:26:31.415] else if (inherits(cond, "warning")) { [17:26:31.415] muffled <- grepl(pattern, "muffleWarning") [17:26:31.415] if (muffled) [17:26:31.415] invokeRestart("muffleWarning") [17:26:31.415] } [17:26:31.415] else if (inherits(cond, "condition")) { [17:26:31.415] if (!is.null(pattern)) { [17:26:31.415] computeRestarts <- base::computeRestarts [17:26:31.415] grepl <- base::grepl [17:26:31.415] restarts <- computeRestarts(cond) [17:26:31.415] for (restart in restarts) { [17:26:31.415] name <- restart$name [17:26:31.415] if (is.null(name)) [17:26:31.415] next [17:26:31.415] if (!grepl(pattern, name)) [17:26:31.415] next [17:26:31.415] invokeRestart(restart) [17:26:31.415] muffled <- TRUE [17:26:31.415] break [17:26:31.415] } [17:26:31.415] } [17:26:31.415] } [17:26:31.415] invisible(muffled) [17:26:31.415] } [17:26:31.415] muffleCondition(cond, pattern = "^muffle") [17:26:31.415] } [17:26:31.415] } [17:26:31.415] } [17:26:31.415] })) [17:26:31.415] }, error = function(ex) { [17:26:31.415] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.415] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.415] ...future.rng), started = ...future.startTime, [17:26:31.415] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.415] version = "1.8"), class = "FutureResult") [17:26:31.415] }, finally = { [17:26:31.415] if (!identical(...future.workdir, getwd())) [17:26:31.415] setwd(...future.workdir) [17:26:31.415] { [17:26:31.415] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.415] ...future.oldOptions$nwarnings <- NULL [17:26:31.415] } [17:26:31.415] base::options(...future.oldOptions) [17:26:31.415] if (.Platform$OS.type == "windows") { [17:26:31.415] old_names <- names(...future.oldEnvVars) [17:26:31.415] envs <- base::Sys.getenv() [17:26:31.415] names <- names(envs) [17:26:31.415] common <- intersect(names, old_names) [17:26:31.415] added <- setdiff(names, old_names) [17:26:31.415] removed <- setdiff(old_names, names) [17:26:31.415] changed <- common[...future.oldEnvVars[common] != [17:26:31.415] envs[common]] [17:26:31.415] NAMES <- toupper(changed) [17:26:31.415] args <- list() [17:26:31.415] for (kk in seq_along(NAMES)) { [17:26:31.415] name <- changed[[kk]] [17:26:31.415] NAME <- NAMES[[kk]] [17:26:31.415] if (name != NAME && is.element(NAME, old_names)) [17:26:31.415] next [17:26:31.415] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.415] } [17:26:31.415] NAMES <- toupper(added) [17:26:31.415] for (kk in seq_along(NAMES)) { [17:26:31.415] name <- added[[kk]] [17:26:31.415] NAME <- NAMES[[kk]] [17:26:31.415] if (name != NAME && is.element(NAME, old_names)) [17:26:31.415] next [17:26:31.415] args[[name]] <- "" [17:26:31.415] } [17:26:31.415] NAMES <- toupper(removed) [17:26:31.415] for (kk in seq_along(NAMES)) { [17:26:31.415] name <- removed[[kk]] [17:26:31.415] NAME <- NAMES[[kk]] [17:26:31.415] if (name != NAME && is.element(NAME, old_names)) [17:26:31.415] next [17:26:31.415] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.415] } [17:26:31.415] if (length(args) > 0) [17:26:31.415] base::do.call(base::Sys.setenv, args = args) [17:26:31.415] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.415] } [17:26:31.415] { [17:26:31.415] if (base::length(...future.futureOptionsAdded) > [17:26:31.415] 0L) { [17:26:31.415] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.415] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.415] base::options(opts) [17:26:31.415] } [17:26:31.415] { [17:26:31.415] { [17:26:31.415] NULL [17:26:31.415] RNGkind("Mersenne-Twister") [17:26:31.415] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.415] inherits = FALSE) [17:26:31.415] } [17:26:31.415] options(future.plan = NULL) [17:26:31.415] if (is.na(NA_character_)) [17:26:31.415] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.415] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.415] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.415] .init = FALSE) [17:26:31.415] } [17:26:31.415] } [17:26:31.415] } [17:26:31.415] }) [17:26:31.415] if (TRUE) { [17:26:31.415] base::sink(type = "output", split = FALSE) [17:26:31.415] if (TRUE) { [17:26:31.415] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.415] } [17:26:31.415] else { [17:26:31.415] ...future.result["stdout"] <- base::list(NULL) [17:26:31.415] } [17:26:31.415] base::close(...future.stdout) [17:26:31.415] ...future.stdout <- NULL [17:26:31.415] } [17:26:31.415] ...future.result$conditions <- ...future.conditions [17:26:31.415] ...future.result$finished <- base::Sys.time() [17:26:31.415] ...future.result [17:26:31.415] } [17:26:31.423] plan(): Setting new future strategy stack: [17:26:31.423] List of future strategies: [17:26:31.423] 1. sequential: [17:26:31.423] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.423] - tweaked: FALSE [17:26:31.423] - call: NULL [17:26:31.424] plan(): nbrOfWorkers() = 1 [17:26:31.428] plan(): Setting new future strategy stack: [17:26:31.428] List of future strategies: [17:26:31.428] 1. sequential: [17:26:31.428] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.428] - tweaked: FALSE [17:26:31.428] - call: future::plan("sequential") [17:26:31.429] plan(): nbrOfWorkers() = 1 [17:26:31.430] SequentialFuture started (and completed) [17:26:31.431] - Launch lazy future ... done [17:26:31.431] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 1 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'list') ... [[1]] SequentialFuture: Label: '' Expression: { 1 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'remove') ... *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'list') ... list() *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'add') ... [17:26:31.440] getGlobalsAndPackages() ... [17:26:31.440] Searching for globals... [17:26:31.442] - globals found: [1] '{' [17:26:31.442] Searching for globals ... DONE [17:26:31.443] Resolving globals: FALSE [17:26:31.443] [17:26:31.443] [17:26:31.444] getGlobalsAndPackages() ... DONE [17:26:31.444] run() for 'Future' ... [17:26:31.445] - state: 'created' [17:26:31.445] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.445] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.445] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.446] - Field: 'label' [17:26:31.446] - Field: 'local' [17:26:31.446] - Field: 'owner' [17:26:31.446] - Field: 'envir' [17:26:31.446] - Field: 'packages' [17:26:31.447] - Field: 'gc' [17:26:31.447] - Field: 'conditions' [17:26:31.447] - Field: 'expr' [17:26:31.447] - Field: 'uuid' [17:26:31.447] - Field: 'seed' [17:26:31.447] - Field: 'version' [17:26:31.448] - Field: 'result' [17:26:31.448] - Field: 'asynchronous' [17:26:31.448] - Field: 'calls' [17:26:31.448] - Field: 'globals' [17:26:31.448] - Field: 'stdout' [17:26:31.448] - Field: 'earlySignal' [17:26:31.449] - Field: 'lazy' [17:26:31.449] - Field: 'state' [17:26:31.449] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.449] - Launch lazy future ... [17:26:31.450] Packages needed by the future expression (n = 0): [17:26:31.450] Packages needed by future strategies (n = 0): [17:26:31.450] { [17:26:31.450] { [17:26:31.450] { [17:26:31.450] ...future.startTime <- base::Sys.time() [17:26:31.450] { [17:26:31.450] { [17:26:31.450] { [17:26:31.450] base::local({ [17:26:31.450] has_future <- base::requireNamespace("future", [17:26:31.450] quietly = TRUE) [17:26:31.450] if (has_future) { [17:26:31.450] ns <- base::getNamespace("future") [17:26:31.450] version <- ns[[".package"]][["version"]] [17:26:31.450] if (is.null(version)) [17:26:31.450] version <- utils::packageVersion("future") [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] version <- NULL [17:26:31.450] } [17:26:31.450] if (!has_future || version < "1.8.0") { [17:26:31.450] info <- base::c(r_version = base::gsub("R version ", [17:26:31.450] "", base::R.version$version.string), [17:26:31.450] platform = base::sprintf("%s (%s-bit)", [17:26:31.450] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.450] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.450] "release", "version")], collapse = " "), [17:26:31.450] hostname = base::Sys.info()[["nodename"]]) [17:26:31.450] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.450] info) [17:26:31.450] info <- base::paste(info, collapse = "; ") [17:26:31.450] if (!has_future) { [17:26:31.450] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.450] info) [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.450] info, version) [17:26:31.450] } [17:26:31.450] base::stop(msg) [17:26:31.450] } [17:26:31.450] }) [17:26:31.450] } [17:26:31.450] ...future.strategy.old <- future::plan("list") [17:26:31.450] options(future.plan = NULL) [17:26:31.450] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.450] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.450] } [17:26:31.450] ...future.workdir <- getwd() [17:26:31.450] } [17:26:31.450] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.450] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.450] } [17:26:31.450] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.450] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.450] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.450] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.450] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.450] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.450] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.450] base::names(...future.oldOptions)) [17:26:31.450] } [17:26:31.450] if (FALSE) { [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] if (TRUE) { [17:26:31.450] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.450] open = "w") [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.450] windows = "NUL", "/dev/null"), open = "w") [17:26:31.450] } [17:26:31.450] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.450] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.450] base::sink(type = "output", split = FALSE) [17:26:31.450] base::close(...future.stdout) [17:26:31.450] }, add = TRUE) [17:26:31.450] } [17:26:31.450] ...future.frame <- base::sys.nframe() [17:26:31.450] ...future.conditions <- base::list() [17:26:31.450] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.450] if (FALSE) { [17:26:31.450] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.450] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.450] } [17:26:31.450] ...future.result <- base::tryCatch({ [17:26:31.450] base::withCallingHandlers({ [17:26:31.450] ...future.value <- base::withVisible(base::local({ [17:26:31.450] 2 [17:26:31.450] })) [17:26:31.450] future::FutureResult(value = ...future.value$value, [17:26:31.450] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.450] ...future.rng), globalenv = if (FALSE) [17:26:31.450] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.450] ...future.globalenv.names)) [17:26:31.450] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.450] }, condition = base::local({ [17:26:31.450] c <- base::c [17:26:31.450] inherits <- base::inherits [17:26:31.450] invokeRestart <- base::invokeRestart [17:26:31.450] length <- base::length [17:26:31.450] list <- base::list [17:26:31.450] seq.int <- base::seq.int [17:26:31.450] signalCondition <- base::signalCondition [17:26:31.450] sys.calls <- base::sys.calls [17:26:31.450] `[[` <- base::`[[` [17:26:31.450] `+` <- base::`+` [17:26:31.450] `<<-` <- base::`<<-` [17:26:31.450] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.450] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.450] 3L)] [17:26:31.450] } [17:26:31.450] function(cond) { [17:26:31.450] is_error <- inherits(cond, "error") [17:26:31.450] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.450] NULL) [17:26:31.450] if (is_error) { [17:26:31.450] sessionInformation <- function() { [17:26:31.450] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.450] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.450] search = base::search(), system = base::Sys.info()) [17:26:31.450] } [17:26:31.450] ...future.conditions[[length(...future.conditions) + [17:26:31.450] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.450] cond$call), session = sessionInformation(), [17:26:31.450] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.450] signalCondition(cond) [17:26:31.450] } [17:26:31.450] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.450] "immediateCondition"))) { [17:26:31.450] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.450] ...future.conditions[[length(...future.conditions) + [17:26:31.450] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.450] if (TRUE && !signal) { [17:26:31.450] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.450] { [17:26:31.450] inherits <- base::inherits [17:26:31.450] invokeRestart <- base::invokeRestart [17:26:31.450] is.null <- base::is.null [17:26:31.450] muffled <- FALSE [17:26:31.450] if (inherits(cond, "message")) { [17:26:31.450] muffled <- grepl(pattern, "muffleMessage") [17:26:31.450] if (muffled) [17:26:31.450] invokeRestart("muffleMessage") [17:26:31.450] } [17:26:31.450] else if (inherits(cond, "warning")) { [17:26:31.450] muffled <- grepl(pattern, "muffleWarning") [17:26:31.450] if (muffled) [17:26:31.450] invokeRestart("muffleWarning") [17:26:31.450] } [17:26:31.450] else if (inherits(cond, "condition")) { [17:26:31.450] if (!is.null(pattern)) { [17:26:31.450] computeRestarts <- base::computeRestarts [17:26:31.450] grepl <- base::grepl [17:26:31.450] restarts <- computeRestarts(cond) [17:26:31.450] for (restart in restarts) { [17:26:31.450] name <- restart$name [17:26:31.450] if (is.null(name)) [17:26:31.450] next [17:26:31.450] if (!grepl(pattern, name)) [17:26:31.450] next [17:26:31.450] invokeRestart(restart) [17:26:31.450] muffled <- TRUE [17:26:31.450] break [17:26:31.450] } [17:26:31.450] } [17:26:31.450] } [17:26:31.450] invisible(muffled) [17:26:31.450] } [17:26:31.450] muffleCondition(cond, pattern = "^muffle") [17:26:31.450] } [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] if (TRUE) { [17:26:31.450] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.450] { [17:26:31.450] inherits <- base::inherits [17:26:31.450] invokeRestart <- base::invokeRestart [17:26:31.450] is.null <- base::is.null [17:26:31.450] muffled <- FALSE [17:26:31.450] if (inherits(cond, "message")) { [17:26:31.450] muffled <- grepl(pattern, "muffleMessage") [17:26:31.450] if (muffled) [17:26:31.450] invokeRestart("muffleMessage") [17:26:31.450] } [17:26:31.450] else if (inherits(cond, "warning")) { [17:26:31.450] muffled <- grepl(pattern, "muffleWarning") [17:26:31.450] if (muffled) [17:26:31.450] invokeRestart("muffleWarning") [17:26:31.450] } [17:26:31.450] else if (inherits(cond, "condition")) { [17:26:31.450] if (!is.null(pattern)) { [17:26:31.450] computeRestarts <- base::computeRestarts [17:26:31.450] grepl <- base::grepl [17:26:31.450] restarts <- computeRestarts(cond) [17:26:31.450] for (restart in restarts) { [17:26:31.450] name <- restart$name [17:26:31.450] if (is.null(name)) [17:26:31.450] next [17:26:31.450] if (!grepl(pattern, name)) [17:26:31.450] next [17:26:31.450] invokeRestart(restart) [17:26:31.450] muffled <- TRUE [17:26:31.450] break [17:26:31.450] } [17:26:31.450] } [17:26:31.450] } [17:26:31.450] invisible(muffled) [17:26:31.450] } [17:26:31.450] muffleCondition(cond, pattern = "^muffle") [17:26:31.450] } [17:26:31.450] } [17:26:31.450] } [17:26:31.450] })) [17:26:31.450] }, error = function(ex) { [17:26:31.450] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.450] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.450] ...future.rng), started = ...future.startTime, [17:26:31.450] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.450] version = "1.8"), class = "FutureResult") [17:26:31.450] }, finally = { [17:26:31.450] if (!identical(...future.workdir, getwd())) [17:26:31.450] setwd(...future.workdir) [17:26:31.450] { [17:26:31.450] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.450] ...future.oldOptions$nwarnings <- NULL [17:26:31.450] } [17:26:31.450] base::options(...future.oldOptions) [17:26:31.450] if (.Platform$OS.type == "windows") { [17:26:31.450] old_names <- names(...future.oldEnvVars) [17:26:31.450] envs <- base::Sys.getenv() [17:26:31.450] names <- names(envs) [17:26:31.450] common <- intersect(names, old_names) [17:26:31.450] added <- setdiff(names, old_names) [17:26:31.450] removed <- setdiff(old_names, names) [17:26:31.450] changed <- common[...future.oldEnvVars[common] != [17:26:31.450] envs[common]] [17:26:31.450] NAMES <- toupper(changed) [17:26:31.450] args <- list() [17:26:31.450] for (kk in seq_along(NAMES)) { [17:26:31.450] name <- changed[[kk]] [17:26:31.450] NAME <- NAMES[[kk]] [17:26:31.450] if (name != NAME && is.element(NAME, old_names)) [17:26:31.450] next [17:26:31.450] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.450] } [17:26:31.450] NAMES <- toupper(added) [17:26:31.450] for (kk in seq_along(NAMES)) { [17:26:31.450] name <- added[[kk]] [17:26:31.450] NAME <- NAMES[[kk]] [17:26:31.450] if (name != NAME && is.element(NAME, old_names)) [17:26:31.450] next [17:26:31.450] args[[name]] <- "" [17:26:31.450] } [17:26:31.450] NAMES <- toupper(removed) [17:26:31.450] for (kk in seq_along(NAMES)) { [17:26:31.450] name <- removed[[kk]] [17:26:31.450] NAME <- NAMES[[kk]] [17:26:31.450] if (name != NAME && is.element(NAME, old_names)) [17:26:31.450] next [17:26:31.450] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.450] } [17:26:31.450] if (length(args) > 0) [17:26:31.450] base::do.call(base::Sys.setenv, args = args) [17:26:31.450] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.450] } [17:26:31.450] { [17:26:31.450] if (base::length(...future.futureOptionsAdded) > [17:26:31.450] 0L) { [17:26:31.450] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.450] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.450] base::options(opts) [17:26:31.450] } [17:26:31.450] { [17:26:31.450] { [17:26:31.450] NULL [17:26:31.450] RNGkind("Mersenne-Twister") [17:26:31.450] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.450] inherits = FALSE) [17:26:31.450] } [17:26:31.450] options(future.plan = NULL) [17:26:31.450] if (is.na(NA_character_)) [17:26:31.450] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.450] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.450] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.450] .init = FALSE) [17:26:31.450] } [17:26:31.450] } [17:26:31.450] } [17:26:31.450] }) [17:26:31.450] if (TRUE) { [17:26:31.450] base::sink(type = "output", split = FALSE) [17:26:31.450] if (TRUE) { [17:26:31.450] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.450] } [17:26:31.450] else { [17:26:31.450] ...future.result["stdout"] <- base::list(NULL) [17:26:31.450] } [17:26:31.450] base::close(...future.stdout) [17:26:31.450] ...future.stdout <- NULL [17:26:31.450] } [17:26:31.450] ...future.result$conditions <- ...future.conditions [17:26:31.450] ...future.result$finished <- base::Sys.time() [17:26:31.450] ...future.result [17:26:31.450] } [17:26:31.456] plan(): Setting new future strategy stack: [17:26:31.456] List of future strategies: [17:26:31.456] 1. sequential: [17:26:31.456] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.456] - tweaked: FALSE [17:26:31.456] - call: NULL [17:26:31.457] plan(): nbrOfWorkers() = 1 [17:26:31.459] plan(): Setting new future strategy stack: [17:26:31.460] List of future strategies: [17:26:31.460] 1. sequential: [17:26:31.460] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.460] - tweaked: FALSE [17:26:31.460] - call: future::plan("sequential") [17:26:31.461] plan(): nbrOfWorkers() = 1 [17:26:31.461] SequentialFuture started (and completed) [17:26:31.461] - Launch lazy future ... done [17:26:31.461] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'list') ... [[1]] SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'collect-first') ... [17:26:31.464] resolved() for 'SequentialFuture' ... [17:26:31.464] - state: 'finished' [17:26:31.465] - run: FALSE [17:26:31.465] - result: 'FutureResult' [17:26:31.465] resolved() for 'SequentialFuture' ... done list() *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'add') ... [17:26:31.466] getGlobalsAndPackages() ... [17:26:31.467] Searching for globals... [17:26:31.468] - globals found: [1] '{' [17:26:31.468] Searching for globals ... DONE [17:26:31.469] Resolving globals: FALSE [17:26:31.469] [17:26:31.470] [17:26:31.470] getGlobalsAndPackages() ... DONE [17:26:31.470] run() for 'Future' ... [17:26:31.471] - state: 'created' [17:26:31.471] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.472] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.472] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.473] - Field: 'label' [17:26:31.473] - Field: 'local' [17:26:31.473] - Field: 'owner' [17:26:31.474] - Field: 'envir' [17:26:31.474] - Field: 'packages' [17:26:31.474] - Field: 'gc' [17:26:31.474] - Field: 'conditions' [17:26:31.475] - Field: 'expr' [17:26:31.475] - Field: 'uuid' [17:26:31.475] - Field: 'seed' [17:26:31.476] - Field: 'version' [17:26:31.476] - Field: 'result' [17:26:31.476] - Field: 'asynchronous' [17:26:31.477] - Field: 'calls' [17:26:31.477] - Field: 'globals' [17:26:31.477] - Field: 'stdout' [17:26:31.478] - Field: 'earlySignal' [17:26:31.478] - Field: 'lazy' [17:26:31.478] - Field: 'state' [17:26:31.478] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.479] - Launch lazy future ... [17:26:31.479] Packages needed by the future expression (n = 0): [17:26:31.480] Packages needed by future strategies (n = 0): [17:26:31.481] { [17:26:31.481] { [17:26:31.481] { [17:26:31.481] ...future.startTime <- base::Sys.time() [17:26:31.481] { [17:26:31.481] { [17:26:31.481] { [17:26:31.481] base::local({ [17:26:31.481] has_future <- base::requireNamespace("future", [17:26:31.481] quietly = TRUE) [17:26:31.481] if (has_future) { [17:26:31.481] ns <- base::getNamespace("future") [17:26:31.481] version <- ns[[".package"]][["version"]] [17:26:31.481] if (is.null(version)) [17:26:31.481] version <- utils::packageVersion("future") [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] version <- NULL [17:26:31.481] } [17:26:31.481] if (!has_future || version < "1.8.0") { [17:26:31.481] info <- base::c(r_version = base::gsub("R version ", [17:26:31.481] "", base::R.version$version.string), [17:26:31.481] platform = base::sprintf("%s (%s-bit)", [17:26:31.481] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.481] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.481] "release", "version")], collapse = " "), [17:26:31.481] hostname = base::Sys.info()[["nodename"]]) [17:26:31.481] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.481] info) [17:26:31.481] info <- base::paste(info, collapse = "; ") [17:26:31.481] if (!has_future) { [17:26:31.481] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.481] info) [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.481] info, version) [17:26:31.481] } [17:26:31.481] base::stop(msg) [17:26:31.481] } [17:26:31.481] }) [17:26:31.481] } [17:26:31.481] ...future.strategy.old <- future::plan("list") [17:26:31.481] options(future.plan = NULL) [17:26:31.481] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.481] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.481] } [17:26:31.481] ...future.workdir <- getwd() [17:26:31.481] } [17:26:31.481] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.481] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.481] } [17:26:31.481] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.481] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.481] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.481] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.481] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.481] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.481] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.481] base::names(...future.oldOptions)) [17:26:31.481] } [17:26:31.481] if (FALSE) { [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] if (TRUE) { [17:26:31.481] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.481] open = "w") [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.481] windows = "NUL", "/dev/null"), open = "w") [17:26:31.481] } [17:26:31.481] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.481] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.481] base::sink(type = "output", split = FALSE) [17:26:31.481] base::close(...future.stdout) [17:26:31.481] }, add = TRUE) [17:26:31.481] } [17:26:31.481] ...future.frame <- base::sys.nframe() [17:26:31.481] ...future.conditions <- base::list() [17:26:31.481] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.481] if (FALSE) { [17:26:31.481] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.481] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.481] } [17:26:31.481] ...future.result <- base::tryCatch({ [17:26:31.481] base::withCallingHandlers({ [17:26:31.481] ...future.value <- base::withVisible(base::local({ [17:26:31.481] 2 [17:26:31.481] })) [17:26:31.481] future::FutureResult(value = ...future.value$value, [17:26:31.481] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.481] ...future.rng), globalenv = if (FALSE) [17:26:31.481] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.481] ...future.globalenv.names)) [17:26:31.481] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.481] }, condition = base::local({ [17:26:31.481] c <- base::c [17:26:31.481] inherits <- base::inherits [17:26:31.481] invokeRestart <- base::invokeRestart [17:26:31.481] length <- base::length [17:26:31.481] list <- base::list [17:26:31.481] seq.int <- base::seq.int [17:26:31.481] signalCondition <- base::signalCondition [17:26:31.481] sys.calls <- base::sys.calls [17:26:31.481] `[[` <- base::`[[` [17:26:31.481] `+` <- base::`+` [17:26:31.481] `<<-` <- base::`<<-` [17:26:31.481] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.481] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.481] 3L)] [17:26:31.481] } [17:26:31.481] function(cond) { [17:26:31.481] is_error <- inherits(cond, "error") [17:26:31.481] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.481] NULL) [17:26:31.481] if (is_error) { [17:26:31.481] sessionInformation <- function() { [17:26:31.481] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.481] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.481] search = base::search(), system = base::Sys.info()) [17:26:31.481] } [17:26:31.481] ...future.conditions[[length(...future.conditions) + [17:26:31.481] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.481] cond$call), session = sessionInformation(), [17:26:31.481] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.481] signalCondition(cond) [17:26:31.481] } [17:26:31.481] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.481] "immediateCondition"))) { [17:26:31.481] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.481] ...future.conditions[[length(...future.conditions) + [17:26:31.481] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.481] if (TRUE && !signal) { [17:26:31.481] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.481] { [17:26:31.481] inherits <- base::inherits [17:26:31.481] invokeRestart <- base::invokeRestart [17:26:31.481] is.null <- base::is.null [17:26:31.481] muffled <- FALSE [17:26:31.481] if (inherits(cond, "message")) { [17:26:31.481] muffled <- grepl(pattern, "muffleMessage") [17:26:31.481] if (muffled) [17:26:31.481] invokeRestart("muffleMessage") [17:26:31.481] } [17:26:31.481] else if (inherits(cond, "warning")) { [17:26:31.481] muffled <- grepl(pattern, "muffleWarning") [17:26:31.481] if (muffled) [17:26:31.481] invokeRestart("muffleWarning") [17:26:31.481] } [17:26:31.481] else if (inherits(cond, "condition")) { [17:26:31.481] if (!is.null(pattern)) { [17:26:31.481] computeRestarts <- base::computeRestarts [17:26:31.481] grepl <- base::grepl [17:26:31.481] restarts <- computeRestarts(cond) [17:26:31.481] for (restart in restarts) { [17:26:31.481] name <- restart$name [17:26:31.481] if (is.null(name)) [17:26:31.481] next [17:26:31.481] if (!grepl(pattern, name)) [17:26:31.481] next [17:26:31.481] invokeRestart(restart) [17:26:31.481] muffled <- TRUE [17:26:31.481] break [17:26:31.481] } [17:26:31.481] } [17:26:31.481] } [17:26:31.481] invisible(muffled) [17:26:31.481] } [17:26:31.481] muffleCondition(cond, pattern = "^muffle") [17:26:31.481] } [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] if (TRUE) { [17:26:31.481] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.481] { [17:26:31.481] inherits <- base::inherits [17:26:31.481] invokeRestart <- base::invokeRestart [17:26:31.481] is.null <- base::is.null [17:26:31.481] muffled <- FALSE [17:26:31.481] if (inherits(cond, "message")) { [17:26:31.481] muffled <- grepl(pattern, "muffleMessage") [17:26:31.481] if (muffled) [17:26:31.481] invokeRestart("muffleMessage") [17:26:31.481] } [17:26:31.481] else if (inherits(cond, "warning")) { [17:26:31.481] muffled <- grepl(pattern, "muffleWarning") [17:26:31.481] if (muffled) [17:26:31.481] invokeRestart("muffleWarning") [17:26:31.481] } [17:26:31.481] else if (inherits(cond, "condition")) { [17:26:31.481] if (!is.null(pattern)) { [17:26:31.481] computeRestarts <- base::computeRestarts [17:26:31.481] grepl <- base::grepl [17:26:31.481] restarts <- computeRestarts(cond) [17:26:31.481] for (restart in restarts) { [17:26:31.481] name <- restart$name [17:26:31.481] if (is.null(name)) [17:26:31.481] next [17:26:31.481] if (!grepl(pattern, name)) [17:26:31.481] next [17:26:31.481] invokeRestart(restart) [17:26:31.481] muffled <- TRUE [17:26:31.481] break [17:26:31.481] } [17:26:31.481] } [17:26:31.481] } [17:26:31.481] invisible(muffled) [17:26:31.481] } [17:26:31.481] muffleCondition(cond, pattern = "^muffle") [17:26:31.481] } [17:26:31.481] } [17:26:31.481] } [17:26:31.481] })) [17:26:31.481] }, error = function(ex) { [17:26:31.481] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.481] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.481] ...future.rng), started = ...future.startTime, [17:26:31.481] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.481] version = "1.8"), class = "FutureResult") [17:26:31.481] }, finally = { [17:26:31.481] if (!identical(...future.workdir, getwd())) [17:26:31.481] setwd(...future.workdir) [17:26:31.481] { [17:26:31.481] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.481] ...future.oldOptions$nwarnings <- NULL [17:26:31.481] } [17:26:31.481] base::options(...future.oldOptions) [17:26:31.481] if (.Platform$OS.type == "windows") { [17:26:31.481] old_names <- names(...future.oldEnvVars) [17:26:31.481] envs <- base::Sys.getenv() [17:26:31.481] names <- names(envs) [17:26:31.481] common <- intersect(names, old_names) [17:26:31.481] added <- setdiff(names, old_names) [17:26:31.481] removed <- setdiff(old_names, names) [17:26:31.481] changed <- common[...future.oldEnvVars[common] != [17:26:31.481] envs[common]] [17:26:31.481] NAMES <- toupper(changed) [17:26:31.481] args <- list() [17:26:31.481] for (kk in seq_along(NAMES)) { [17:26:31.481] name <- changed[[kk]] [17:26:31.481] NAME <- NAMES[[kk]] [17:26:31.481] if (name != NAME && is.element(NAME, old_names)) [17:26:31.481] next [17:26:31.481] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.481] } [17:26:31.481] NAMES <- toupper(added) [17:26:31.481] for (kk in seq_along(NAMES)) { [17:26:31.481] name <- added[[kk]] [17:26:31.481] NAME <- NAMES[[kk]] [17:26:31.481] if (name != NAME && is.element(NAME, old_names)) [17:26:31.481] next [17:26:31.481] args[[name]] <- "" [17:26:31.481] } [17:26:31.481] NAMES <- toupper(removed) [17:26:31.481] for (kk in seq_along(NAMES)) { [17:26:31.481] name <- removed[[kk]] [17:26:31.481] NAME <- NAMES[[kk]] [17:26:31.481] if (name != NAME && is.element(NAME, old_names)) [17:26:31.481] next [17:26:31.481] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.481] } [17:26:31.481] if (length(args) > 0) [17:26:31.481] base::do.call(base::Sys.setenv, args = args) [17:26:31.481] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.481] } [17:26:31.481] { [17:26:31.481] if (base::length(...future.futureOptionsAdded) > [17:26:31.481] 0L) { [17:26:31.481] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.481] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.481] base::options(opts) [17:26:31.481] } [17:26:31.481] { [17:26:31.481] { [17:26:31.481] NULL [17:26:31.481] RNGkind("Mersenne-Twister") [17:26:31.481] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.481] inherits = FALSE) [17:26:31.481] } [17:26:31.481] options(future.plan = NULL) [17:26:31.481] if (is.na(NA_character_)) [17:26:31.481] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.481] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.481] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.481] .init = FALSE) [17:26:31.481] } [17:26:31.481] } [17:26:31.481] } [17:26:31.481] }) [17:26:31.481] if (TRUE) { [17:26:31.481] base::sink(type = "output", split = FALSE) [17:26:31.481] if (TRUE) { [17:26:31.481] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.481] } [17:26:31.481] else { [17:26:31.481] ...future.result["stdout"] <- base::list(NULL) [17:26:31.481] } [17:26:31.481] base::close(...future.stdout) [17:26:31.481] ...future.stdout <- NULL [17:26:31.481] } [17:26:31.481] ...future.result$conditions <- ...future.conditions [17:26:31.481] ...future.result$finished <- base::Sys.time() [17:26:31.481] ...future.result [17:26:31.481] } [17:26:31.488] plan(): Setting new future strategy stack: [17:26:31.488] List of future strategies: [17:26:31.488] 1. sequential: [17:26:31.488] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.488] - tweaked: FALSE [17:26:31.488] - call: NULL [17:26:31.492] plan(): nbrOfWorkers() = 1 [17:26:31.494] plan(): Setting new future strategy stack: [17:26:31.494] List of future strategies: [17:26:31.494] 1. sequential: [17:26:31.494] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.494] - tweaked: FALSE [17:26:31.494] - call: future::plan("sequential") [17:26:31.495] plan(): nbrOfWorkers() = 1 [17:26:31.496] SequentialFuture started (and completed) [17:26:31.496] - Launch lazy future ... done [17:26:31.496] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'reset') ... *** FutureRegistry('multicore-b7b35427-77a1-c7a7-0f11-19d562be2457', 'list') ... list() *** FutureRegistry('rscript', 'list') ... list() *** FutureRegistry('rscript', 'add') ... [17:26:31.498] getGlobalsAndPackages() ... [17:26:31.499] Searching for globals... [17:26:31.500] - globals found: [1] '{' [17:26:31.500] Searching for globals ... DONE [17:26:31.500] Resolving globals: FALSE [17:26:31.501] [17:26:31.501] [17:26:31.502] getGlobalsAndPackages() ... DONE [17:26:31.502] run() for 'Future' ... [17:26:31.502] - state: 'created' [17:26:31.503] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.503] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.504] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.504] - Field: 'label' [17:26:31.504] - Field: 'local' [17:26:31.505] - Field: 'owner' [17:26:31.505] - Field: 'envir' [17:26:31.505] - Field: 'packages' [17:26:31.505] - Field: 'gc' [17:26:31.506] - Field: 'conditions' [17:26:31.506] - Field: 'expr' [17:26:31.506] - Field: 'uuid' [17:26:31.507] - Field: 'seed' [17:26:31.507] - Field: 'version' [17:26:31.507] - Field: 'result' [17:26:31.508] - Field: 'asynchronous' [17:26:31.508] - Field: 'calls' [17:26:31.508] - Field: 'globals' [17:26:31.508] - Field: 'stdout' [17:26:31.509] - Field: 'earlySignal' [17:26:31.509] - Field: 'lazy' [17:26:31.509] - Field: 'state' [17:26:31.510] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.510] - Launch lazy future ... [17:26:31.510] Packages needed by the future expression (n = 0): [17:26:31.511] Packages needed by future strategies (n = 0): [17:26:31.512] { [17:26:31.512] { [17:26:31.512] { [17:26:31.512] ...future.startTime <- base::Sys.time() [17:26:31.512] { [17:26:31.512] { [17:26:31.512] { [17:26:31.512] base::local({ [17:26:31.512] has_future <- base::requireNamespace("future", [17:26:31.512] quietly = TRUE) [17:26:31.512] if (has_future) { [17:26:31.512] ns <- base::getNamespace("future") [17:26:31.512] version <- ns[[".package"]][["version"]] [17:26:31.512] if (is.null(version)) [17:26:31.512] version <- utils::packageVersion("future") [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] version <- NULL [17:26:31.512] } [17:26:31.512] if (!has_future || version < "1.8.0") { [17:26:31.512] info <- base::c(r_version = base::gsub("R version ", [17:26:31.512] "", base::R.version$version.string), [17:26:31.512] platform = base::sprintf("%s (%s-bit)", [17:26:31.512] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.512] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.512] "release", "version")], collapse = " "), [17:26:31.512] hostname = base::Sys.info()[["nodename"]]) [17:26:31.512] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.512] info) [17:26:31.512] info <- base::paste(info, collapse = "; ") [17:26:31.512] if (!has_future) { [17:26:31.512] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.512] info) [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.512] info, version) [17:26:31.512] } [17:26:31.512] base::stop(msg) [17:26:31.512] } [17:26:31.512] }) [17:26:31.512] } [17:26:31.512] ...future.strategy.old <- future::plan("list") [17:26:31.512] options(future.plan = NULL) [17:26:31.512] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.512] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.512] } [17:26:31.512] ...future.workdir <- getwd() [17:26:31.512] } [17:26:31.512] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.512] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.512] } [17:26:31.512] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.512] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.512] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.512] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.512] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.512] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.512] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.512] base::names(...future.oldOptions)) [17:26:31.512] } [17:26:31.512] if (FALSE) { [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] if (TRUE) { [17:26:31.512] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.512] open = "w") [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.512] windows = "NUL", "/dev/null"), open = "w") [17:26:31.512] } [17:26:31.512] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.512] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.512] base::sink(type = "output", split = FALSE) [17:26:31.512] base::close(...future.stdout) [17:26:31.512] }, add = TRUE) [17:26:31.512] } [17:26:31.512] ...future.frame <- base::sys.nframe() [17:26:31.512] ...future.conditions <- base::list() [17:26:31.512] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.512] if (FALSE) { [17:26:31.512] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.512] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.512] } [17:26:31.512] ...future.result <- base::tryCatch({ [17:26:31.512] base::withCallingHandlers({ [17:26:31.512] ...future.value <- base::withVisible(base::local({ [17:26:31.512] 1 [17:26:31.512] })) [17:26:31.512] future::FutureResult(value = ...future.value$value, [17:26:31.512] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.512] ...future.rng), globalenv = if (FALSE) [17:26:31.512] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.512] ...future.globalenv.names)) [17:26:31.512] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.512] }, condition = base::local({ [17:26:31.512] c <- base::c [17:26:31.512] inherits <- base::inherits [17:26:31.512] invokeRestart <- base::invokeRestart [17:26:31.512] length <- base::length [17:26:31.512] list <- base::list [17:26:31.512] seq.int <- base::seq.int [17:26:31.512] signalCondition <- base::signalCondition [17:26:31.512] sys.calls <- base::sys.calls [17:26:31.512] `[[` <- base::`[[` [17:26:31.512] `+` <- base::`+` [17:26:31.512] `<<-` <- base::`<<-` [17:26:31.512] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.512] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.512] 3L)] [17:26:31.512] } [17:26:31.512] function(cond) { [17:26:31.512] is_error <- inherits(cond, "error") [17:26:31.512] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.512] NULL) [17:26:31.512] if (is_error) { [17:26:31.512] sessionInformation <- function() { [17:26:31.512] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.512] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.512] search = base::search(), system = base::Sys.info()) [17:26:31.512] } [17:26:31.512] ...future.conditions[[length(...future.conditions) + [17:26:31.512] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.512] cond$call), session = sessionInformation(), [17:26:31.512] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.512] signalCondition(cond) [17:26:31.512] } [17:26:31.512] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.512] "immediateCondition"))) { [17:26:31.512] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.512] ...future.conditions[[length(...future.conditions) + [17:26:31.512] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.512] if (TRUE && !signal) { [17:26:31.512] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.512] { [17:26:31.512] inherits <- base::inherits [17:26:31.512] invokeRestart <- base::invokeRestart [17:26:31.512] is.null <- base::is.null [17:26:31.512] muffled <- FALSE [17:26:31.512] if (inherits(cond, "message")) { [17:26:31.512] muffled <- grepl(pattern, "muffleMessage") [17:26:31.512] if (muffled) [17:26:31.512] invokeRestart("muffleMessage") [17:26:31.512] } [17:26:31.512] else if (inherits(cond, "warning")) { [17:26:31.512] muffled <- grepl(pattern, "muffleWarning") [17:26:31.512] if (muffled) [17:26:31.512] invokeRestart("muffleWarning") [17:26:31.512] } [17:26:31.512] else if (inherits(cond, "condition")) { [17:26:31.512] if (!is.null(pattern)) { [17:26:31.512] computeRestarts <- base::computeRestarts [17:26:31.512] grepl <- base::grepl [17:26:31.512] restarts <- computeRestarts(cond) [17:26:31.512] for (restart in restarts) { [17:26:31.512] name <- restart$name [17:26:31.512] if (is.null(name)) [17:26:31.512] next [17:26:31.512] if (!grepl(pattern, name)) [17:26:31.512] next [17:26:31.512] invokeRestart(restart) [17:26:31.512] muffled <- TRUE [17:26:31.512] break [17:26:31.512] } [17:26:31.512] } [17:26:31.512] } [17:26:31.512] invisible(muffled) [17:26:31.512] } [17:26:31.512] muffleCondition(cond, pattern = "^muffle") [17:26:31.512] } [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] if (TRUE) { [17:26:31.512] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.512] { [17:26:31.512] inherits <- base::inherits [17:26:31.512] invokeRestart <- base::invokeRestart [17:26:31.512] is.null <- base::is.null [17:26:31.512] muffled <- FALSE [17:26:31.512] if (inherits(cond, "message")) { [17:26:31.512] muffled <- grepl(pattern, "muffleMessage") [17:26:31.512] if (muffled) [17:26:31.512] invokeRestart("muffleMessage") [17:26:31.512] } [17:26:31.512] else if (inherits(cond, "warning")) { [17:26:31.512] muffled <- grepl(pattern, "muffleWarning") [17:26:31.512] if (muffled) [17:26:31.512] invokeRestart("muffleWarning") [17:26:31.512] } [17:26:31.512] else if (inherits(cond, "condition")) { [17:26:31.512] if (!is.null(pattern)) { [17:26:31.512] computeRestarts <- base::computeRestarts [17:26:31.512] grepl <- base::grepl [17:26:31.512] restarts <- computeRestarts(cond) [17:26:31.512] for (restart in restarts) { [17:26:31.512] name <- restart$name [17:26:31.512] if (is.null(name)) [17:26:31.512] next [17:26:31.512] if (!grepl(pattern, name)) [17:26:31.512] next [17:26:31.512] invokeRestart(restart) [17:26:31.512] muffled <- TRUE [17:26:31.512] break [17:26:31.512] } [17:26:31.512] } [17:26:31.512] } [17:26:31.512] invisible(muffled) [17:26:31.512] } [17:26:31.512] muffleCondition(cond, pattern = "^muffle") [17:26:31.512] } [17:26:31.512] } [17:26:31.512] } [17:26:31.512] })) [17:26:31.512] }, error = function(ex) { [17:26:31.512] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.512] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.512] ...future.rng), started = ...future.startTime, [17:26:31.512] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.512] version = "1.8"), class = "FutureResult") [17:26:31.512] }, finally = { [17:26:31.512] if (!identical(...future.workdir, getwd())) [17:26:31.512] setwd(...future.workdir) [17:26:31.512] { [17:26:31.512] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.512] ...future.oldOptions$nwarnings <- NULL [17:26:31.512] } [17:26:31.512] base::options(...future.oldOptions) [17:26:31.512] if (.Platform$OS.type == "windows") { [17:26:31.512] old_names <- names(...future.oldEnvVars) [17:26:31.512] envs <- base::Sys.getenv() [17:26:31.512] names <- names(envs) [17:26:31.512] common <- intersect(names, old_names) [17:26:31.512] added <- setdiff(names, old_names) [17:26:31.512] removed <- setdiff(old_names, names) [17:26:31.512] changed <- common[...future.oldEnvVars[common] != [17:26:31.512] envs[common]] [17:26:31.512] NAMES <- toupper(changed) [17:26:31.512] args <- list() [17:26:31.512] for (kk in seq_along(NAMES)) { [17:26:31.512] name <- changed[[kk]] [17:26:31.512] NAME <- NAMES[[kk]] [17:26:31.512] if (name != NAME && is.element(NAME, old_names)) [17:26:31.512] next [17:26:31.512] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.512] } [17:26:31.512] NAMES <- toupper(added) [17:26:31.512] for (kk in seq_along(NAMES)) { [17:26:31.512] name <- added[[kk]] [17:26:31.512] NAME <- NAMES[[kk]] [17:26:31.512] if (name != NAME && is.element(NAME, old_names)) [17:26:31.512] next [17:26:31.512] args[[name]] <- "" [17:26:31.512] } [17:26:31.512] NAMES <- toupper(removed) [17:26:31.512] for (kk in seq_along(NAMES)) { [17:26:31.512] name <- removed[[kk]] [17:26:31.512] NAME <- NAMES[[kk]] [17:26:31.512] if (name != NAME && is.element(NAME, old_names)) [17:26:31.512] next [17:26:31.512] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.512] } [17:26:31.512] if (length(args) > 0) [17:26:31.512] base::do.call(base::Sys.setenv, args = args) [17:26:31.512] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.512] } [17:26:31.512] { [17:26:31.512] if (base::length(...future.futureOptionsAdded) > [17:26:31.512] 0L) { [17:26:31.512] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.512] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.512] base::options(opts) [17:26:31.512] } [17:26:31.512] { [17:26:31.512] { [17:26:31.512] NULL [17:26:31.512] RNGkind("Mersenne-Twister") [17:26:31.512] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.512] inherits = FALSE) [17:26:31.512] } [17:26:31.512] options(future.plan = NULL) [17:26:31.512] if (is.na(NA_character_)) [17:26:31.512] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.512] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.512] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.512] .init = FALSE) [17:26:31.512] } [17:26:31.512] } [17:26:31.512] } [17:26:31.512] }) [17:26:31.512] if (TRUE) { [17:26:31.512] base::sink(type = "output", split = FALSE) [17:26:31.512] if (TRUE) { [17:26:31.512] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.512] } [17:26:31.512] else { [17:26:31.512] ...future.result["stdout"] <- base::list(NULL) [17:26:31.512] } [17:26:31.512] base::close(...future.stdout) [17:26:31.512] ...future.stdout <- NULL [17:26:31.512] } [17:26:31.512] ...future.result$conditions <- ...future.conditions [17:26:31.512] ...future.result$finished <- base::Sys.time() [17:26:31.512] ...future.result [17:26:31.512] } [17:26:31.519] plan(): Setting new future strategy stack: [17:26:31.519] List of future strategies: [17:26:31.519] 1. sequential: [17:26:31.519] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.519] - tweaked: FALSE [17:26:31.519] - call: NULL [17:26:31.520] plan(): nbrOfWorkers() = 1 [17:26:31.522] plan(): Setting new future strategy stack: [17:26:31.522] List of future strategies: [17:26:31.522] 1. sequential: [17:26:31.522] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.522] - tweaked: FALSE [17:26:31.522] - call: future::plan("sequential") [17:26:31.523] plan(): nbrOfWorkers() = 1 [17:26:31.524] SequentialFuture started (and completed) [17:26:31.524] - Launch lazy future ... done [17:26:31.524] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 1 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('rscript', 'list') ... [[1]] SequentialFuture: Label: '' Expression: { 1 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('rscript', 'remove') ... *** FutureRegistry('rscript', 'list') ... list() *** FutureRegistry('rscript', 'add') ... [17:26:31.527] getGlobalsAndPackages() ... [17:26:31.527] Searching for globals... [17:26:31.529] - globals found: [1] '{' [17:26:31.529] Searching for globals ... DONE [17:26:31.529] Resolving globals: FALSE [17:26:31.530] [17:26:31.530] [17:26:31.530] getGlobalsAndPackages() ... DONE [17:26:31.531] run() for 'Future' ... [17:26:31.531] - state: 'created' [17:26:31.532] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.532] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.532] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.533] - Field: 'label' [17:26:31.533] - Field: 'local' [17:26:31.533] - Field: 'owner' [17:26:31.534] - Field: 'envir' [17:26:31.534] - Field: 'packages' [17:26:31.534] - Field: 'gc' [17:26:31.535] - Field: 'conditions' [17:26:31.535] - Field: 'expr' [17:26:31.535] - Field: 'uuid' [17:26:31.536] - Field: 'seed' [17:26:31.536] - Field: 'version' [17:26:31.536] - Field: 'result' [17:26:31.536] - Field: 'asynchronous' [17:26:31.537] - Field: 'calls' [17:26:31.537] - Field: 'globals' [17:26:31.537] - Field: 'stdout' [17:26:31.538] - Field: 'earlySignal' [17:26:31.538] - Field: 'lazy' [17:26:31.538] - Field: 'state' [17:26:31.539] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.539] - Launch lazy future ... [17:26:31.540] Packages needed by the future expression (n = 0): [17:26:31.540] Packages needed by future strategies (n = 0): [17:26:31.541] { [17:26:31.541] { [17:26:31.541] { [17:26:31.541] ...future.startTime <- base::Sys.time() [17:26:31.541] { [17:26:31.541] { [17:26:31.541] { [17:26:31.541] base::local({ [17:26:31.541] has_future <- base::requireNamespace("future", [17:26:31.541] quietly = TRUE) [17:26:31.541] if (has_future) { [17:26:31.541] ns <- base::getNamespace("future") [17:26:31.541] version <- ns[[".package"]][["version"]] [17:26:31.541] if (is.null(version)) [17:26:31.541] version <- utils::packageVersion("future") [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] version <- NULL [17:26:31.541] } [17:26:31.541] if (!has_future || version < "1.8.0") { [17:26:31.541] info <- base::c(r_version = base::gsub("R version ", [17:26:31.541] "", base::R.version$version.string), [17:26:31.541] platform = base::sprintf("%s (%s-bit)", [17:26:31.541] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.541] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.541] "release", "version")], collapse = " "), [17:26:31.541] hostname = base::Sys.info()[["nodename"]]) [17:26:31.541] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.541] info) [17:26:31.541] info <- base::paste(info, collapse = "; ") [17:26:31.541] if (!has_future) { [17:26:31.541] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.541] info) [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.541] info, version) [17:26:31.541] } [17:26:31.541] base::stop(msg) [17:26:31.541] } [17:26:31.541] }) [17:26:31.541] } [17:26:31.541] ...future.strategy.old <- future::plan("list") [17:26:31.541] options(future.plan = NULL) [17:26:31.541] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.541] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.541] } [17:26:31.541] ...future.workdir <- getwd() [17:26:31.541] } [17:26:31.541] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.541] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.541] } [17:26:31.541] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.541] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.541] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.541] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.541] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.541] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.541] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.541] base::names(...future.oldOptions)) [17:26:31.541] } [17:26:31.541] if (FALSE) { [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] if (TRUE) { [17:26:31.541] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.541] open = "w") [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.541] windows = "NUL", "/dev/null"), open = "w") [17:26:31.541] } [17:26:31.541] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.541] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.541] base::sink(type = "output", split = FALSE) [17:26:31.541] base::close(...future.stdout) [17:26:31.541] }, add = TRUE) [17:26:31.541] } [17:26:31.541] ...future.frame <- base::sys.nframe() [17:26:31.541] ...future.conditions <- base::list() [17:26:31.541] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.541] if (FALSE) { [17:26:31.541] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.541] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.541] } [17:26:31.541] ...future.result <- base::tryCatch({ [17:26:31.541] base::withCallingHandlers({ [17:26:31.541] ...future.value <- base::withVisible(base::local({ [17:26:31.541] 2 [17:26:31.541] })) [17:26:31.541] future::FutureResult(value = ...future.value$value, [17:26:31.541] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.541] ...future.rng), globalenv = if (FALSE) [17:26:31.541] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.541] ...future.globalenv.names)) [17:26:31.541] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.541] }, condition = base::local({ [17:26:31.541] c <- base::c [17:26:31.541] inherits <- base::inherits [17:26:31.541] invokeRestart <- base::invokeRestart [17:26:31.541] length <- base::length [17:26:31.541] list <- base::list [17:26:31.541] seq.int <- base::seq.int [17:26:31.541] signalCondition <- base::signalCondition [17:26:31.541] sys.calls <- base::sys.calls [17:26:31.541] `[[` <- base::`[[` [17:26:31.541] `+` <- base::`+` [17:26:31.541] `<<-` <- base::`<<-` [17:26:31.541] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.541] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.541] 3L)] [17:26:31.541] } [17:26:31.541] function(cond) { [17:26:31.541] is_error <- inherits(cond, "error") [17:26:31.541] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.541] NULL) [17:26:31.541] if (is_error) { [17:26:31.541] sessionInformation <- function() { [17:26:31.541] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.541] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.541] search = base::search(), system = base::Sys.info()) [17:26:31.541] } [17:26:31.541] ...future.conditions[[length(...future.conditions) + [17:26:31.541] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.541] cond$call), session = sessionInformation(), [17:26:31.541] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.541] signalCondition(cond) [17:26:31.541] } [17:26:31.541] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.541] "immediateCondition"))) { [17:26:31.541] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.541] ...future.conditions[[length(...future.conditions) + [17:26:31.541] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.541] if (TRUE && !signal) { [17:26:31.541] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.541] { [17:26:31.541] inherits <- base::inherits [17:26:31.541] invokeRestart <- base::invokeRestart [17:26:31.541] is.null <- base::is.null [17:26:31.541] muffled <- FALSE [17:26:31.541] if (inherits(cond, "message")) { [17:26:31.541] muffled <- grepl(pattern, "muffleMessage") [17:26:31.541] if (muffled) [17:26:31.541] invokeRestart("muffleMessage") [17:26:31.541] } [17:26:31.541] else if (inherits(cond, "warning")) { [17:26:31.541] muffled <- grepl(pattern, "muffleWarning") [17:26:31.541] if (muffled) [17:26:31.541] invokeRestart("muffleWarning") [17:26:31.541] } [17:26:31.541] else if (inherits(cond, "condition")) { [17:26:31.541] if (!is.null(pattern)) { [17:26:31.541] computeRestarts <- base::computeRestarts [17:26:31.541] grepl <- base::grepl [17:26:31.541] restarts <- computeRestarts(cond) [17:26:31.541] for (restart in restarts) { [17:26:31.541] name <- restart$name [17:26:31.541] if (is.null(name)) [17:26:31.541] next [17:26:31.541] if (!grepl(pattern, name)) [17:26:31.541] next [17:26:31.541] invokeRestart(restart) [17:26:31.541] muffled <- TRUE [17:26:31.541] break [17:26:31.541] } [17:26:31.541] } [17:26:31.541] } [17:26:31.541] invisible(muffled) [17:26:31.541] } [17:26:31.541] muffleCondition(cond, pattern = "^muffle") [17:26:31.541] } [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] if (TRUE) { [17:26:31.541] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.541] { [17:26:31.541] inherits <- base::inherits [17:26:31.541] invokeRestart <- base::invokeRestart [17:26:31.541] is.null <- base::is.null [17:26:31.541] muffled <- FALSE [17:26:31.541] if (inherits(cond, "message")) { [17:26:31.541] muffled <- grepl(pattern, "muffleMessage") [17:26:31.541] if (muffled) [17:26:31.541] invokeRestart("muffleMessage") [17:26:31.541] } [17:26:31.541] else if (inherits(cond, "warning")) { [17:26:31.541] muffled <- grepl(pattern, "muffleWarning") [17:26:31.541] if (muffled) [17:26:31.541] invokeRestart("muffleWarning") [17:26:31.541] } [17:26:31.541] else if (inherits(cond, "condition")) { [17:26:31.541] if (!is.null(pattern)) { [17:26:31.541] computeRestarts <- base::computeRestarts [17:26:31.541] grepl <- base::grepl [17:26:31.541] restarts <- computeRestarts(cond) [17:26:31.541] for (restart in restarts) { [17:26:31.541] name <- restart$name [17:26:31.541] if (is.null(name)) [17:26:31.541] next [17:26:31.541] if (!grepl(pattern, name)) [17:26:31.541] next [17:26:31.541] invokeRestart(restart) [17:26:31.541] muffled <- TRUE [17:26:31.541] break [17:26:31.541] } [17:26:31.541] } [17:26:31.541] } [17:26:31.541] invisible(muffled) [17:26:31.541] } [17:26:31.541] muffleCondition(cond, pattern = "^muffle") [17:26:31.541] } [17:26:31.541] } [17:26:31.541] } [17:26:31.541] })) [17:26:31.541] }, error = function(ex) { [17:26:31.541] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.541] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.541] ...future.rng), started = ...future.startTime, [17:26:31.541] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.541] version = "1.8"), class = "FutureResult") [17:26:31.541] }, finally = { [17:26:31.541] if (!identical(...future.workdir, getwd())) [17:26:31.541] setwd(...future.workdir) [17:26:31.541] { [17:26:31.541] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.541] ...future.oldOptions$nwarnings <- NULL [17:26:31.541] } [17:26:31.541] base::options(...future.oldOptions) [17:26:31.541] if (.Platform$OS.type == "windows") { [17:26:31.541] old_names <- names(...future.oldEnvVars) [17:26:31.541] envs <- base::Sys.getenv() [17:26:31.541] names <- names(envs) [17:26:31.541] common <- intersect(names, old_names) [17:26:31.541] added <- setdiff(names, old_names) [17:26:31.541] removed <- setdiff(old_names, names) [17:26:31.541] changed <- common[...future.oldEnvVars[common] != [17:26:31.541] envs[common]] [17:26:31.541] NAMES <- toupper(changed) [17:26:31.541] args <- list() [17:26:31.541] for (kk in seq_along(NAMES)) { [17:26:31.541] name <- changed[[kk]] [17:26:31.541] NAME <- NAMES[[kk]] [17:26:31.541] if (name != NAME && is.element(NAME, old_names)) [17:26:31.541] next [17:26:31.541] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.541] } [17:26:31.541] NAMES <- toupper(added) [17:26:31.541] for (kk in seq_along(NAMES)) { [17:26:31.541] name <- added[[kk]] [17:26:31.541] NAME <- NAMES[[kk]] [17:26:31.541] if (name != NAME && is.element(NAME, old_names)) [17:26:31.541] next [17:26:31.541] args[[name]] <- "" [17:26:31.541] } [17:26:31.541] NAMES <- toupper(removed) [17:26:31.541] for (kk in seq_along(NAMES)) { [17:26:31.541] name <- removed[[kk]] [17:26:31.541] NAME <- NAMES[[kk]] [17:26:31.541] if (name != NAME && is.element(NAME, old_names)) [17:26:31.541] next [17:26:31.541] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.541] } [17:26:31.541] if (length(args) > 0) [17:26:31.541] base::do.call(base::Sys.setenv, args = args) [17:26:31.541] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.541] } [17:26:31.541] { [17:26:31.541] if (base::length(...future.futureOptionsAdded) > [17:26:31.541] 0L) { [17:26:31.541] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.541] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.541] base::options(opts) [17:26:31.541] } [17:26:31.541] { [17:26:31.541] { [17:26:31.541] NULL [17:26:31.541] RNGkind("Mersenne-Twister") [17:26:31.541] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.541] inherits = FALSE) [17:26:31.541] } [17:26:31.541] options(future.plan = NULL) [17:26:31.541] if (is.na(NA_character_)) [17:26:31.541] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.541] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.541] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.541] .init = FALSE) [17:26:31.541] } [17:26:31.541] } [17:26:31.541] } [17:26:31.541] }) [17:26:31.541] if (TRUE) { [17:26:31.541] base::sink(type = "output", split = FALSE) [17:26:31.541] if (TRUE) { [17:26:31.541] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.541] } [17:26:31.541] else { [17:26:31.541] ...future.result["stdout"] <- base::list(NULL) [17:26:31.541] } [17:26:31.541] base::close(...future.stdout) [17:26:31.541] ...future.stdout <- NULL [17:26:31.541] } [17:26:31.541] ...future.result$conditions <- ...future.conditions [17:26:31.541] ...future.result$finished <- base::Sys.time() [17:26:31.541] ...future.result [17:26:31.541] } [17:26:31.548] plan(): Setting new future strategy stack: [17:26:31.548] List of future strategies: [17:26:31.548] 1. sequential: [17:26:31.548] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.548] - tweaked: FALSE [17:26:31.548] - call: NULL [17:26:31.550] plan(): nbrOfWorkers() = 1 [17:26:31.552] plan(): Setting new future strategy stack: [17:26:31.552] List of future strategies: [17:26:31.552] 1. sequential: [17:26:31.552] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.552] - tweaked: FALSE [17:26:31.552] - call: future::plan("sequential") [17:26:31.553] plan(): nbrOfWorkers() = 1 [17:26:31.554] SequentialFuture started (and completed) [17:26:31.554] - Launch lazy future ... done [17:26:31.555] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('rscript', 'list') ... [[1]] SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('rscript', 'collect-first') ... [17:26:31.579] resolved() for 'SequentialFuture' ... [17:26:31.579] - state: 'finished' [17:26:31.580] - run: FALSE [17:26:31.580] - result: 'FutureResult' [17:26:31.580] resolved() for 'SequentialFuture' ... done list() *** FutureRegistry('rscript', 'add') ... [17:26:31.581] getGlobalsAndPackages() ... [17:26:31.582] Searching for globals... [17:26:31.583] - globals found: [1] '{' [17:26:31.583] Searching for globals ... DONE [17:26:31.584] Resolving globals: FALSE [17:26:31.585] [17:26:31.585] [17:26:31.585] getGlobalsAndPackages() ... DONE [17:26:31.586] run() for 'Future' ... [17:26:31.586] - state: 'created' [17:26:31.587] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.587] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.588] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.588] - Field: 'label' [17:26:31.588] - Field: 'local' [17:26:31.589] - Field: 'owner' [17:26:31.589] - Field: 'envir' [17:26:31.589] - Field: 'packages' [17:26:31.590] - Field: 'gc' [17:26:31.590] - Field: 'conditions' [17:26:31.591] - Field: 'expr' [17:26:31.591] - Field: 'uuid' [17:26:31.591] - Field: 'seed' [17:26:31.592] - Field: 'version' [17:26:31.592] - Field: 'result' [17:26:31.592] - Field: 'asynchronous' [17:26:31.593] - Field: 'calls' [17:26:31.593] - Field: 'globals' [17:26:31.593] - Field: 'stdout' [17:26:31.594] - Field: 'earlySignal' [17:26:31.594] - Field: 'lazy' [17:26:31.594] - Field: 'state' [17:26:31.595] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.595] - Launch lazy future ... [17:26:31.596] Packages needed by the future expression (n = 0): [17:26:31.596] Packages needed by future strategies (n = 0): [17:26:31.597] { [17:26:31.597] { [17:26:31.597] { [17:26:31.597] ...future.startTime <- base::Sys.time() [17:26:31.597] { [17:26:31.597] { [17:26:31.597] { [17:26:31.597] base::local({ [17:26:31.597] has_future <- base::requireNamespace("future", [17:26:31.597] quietly = TRUE) [17:26:31.597] if (has_future) { [17:26:31.597] ns <- base::getNamespace("future") [17:26:31.597] version <- ns[[".package"]][["version"]] [17:26:31.597] if (is.null(version)) [17:26:31.597] version <- utils::packageVersion("future") [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] version <- NULL [17:26:31.597] } [17:26:31.597] if (!has_future || version < "1.8.0") { [17:26:31.597] info <- base::c(r_version = base::gsub("R version ", [17:26:31.597] "", base::R.version$version.string), [17:26:31.597] platform = base::sprintf("%s (%s-bit)", [17:26:31.597] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.597] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.597] "release", "version")], collapse = " "), [17:26:31.597] hostname = base::Sys.info()[["nodename"]]) [17:26:31.597] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.597] info) [17:26:31.597] info <- base::paste(info, collapse = "; ") [17:26:31.597] if (!has_future) { [17:26:31.597] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.597] info) [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.597] info, version) [17:26:31.597] } [17:26:31.597] base::stop(msg) [17:26:31.597] } [17:26:31.597] }) [17:26:31.597] } [17:26:31.597] ...future.strategy.old <- future::plan("list") [17:26:31.597] options(future.plan = NULL) [17:26:31.597] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.597] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.597] } [17:26:31.597] ...future.workdir <- getwd() [17:26:31.597] } [17:26:31.597] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.597] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.597] } [17:26:31.597] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.597] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.597] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.597] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.597] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.597] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.597] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.597] base::names(...future.oldOptions)) [17:26:31.597] } [17:26:31.597] if (FALSE) { [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] if (TRUE) { [17:26:31.597] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.597] open = "w") [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.597] windows = "NUL", "/dev/null"), open = "w") [17:26:31.597] } [17:26:31.597] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.597] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.597] base::sink(type = "output", split = FALSE) [17:26:31.597] base::close(...future.stdout) [17:26:31.597] }, add = TRUE) [17:26:31.597] } [17:26:31.597] ...future.frame <- base::sys.nframe() [17:26:31.597] ...future.conditions <- base::list() [17:26:31.597] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.597] if (FALSE) { [17:26:31.597] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.597] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.597] } [17:26:31.597] ...future.result <- base::tryCatch({ [17:26:31.597] base::withCallingHandlers({ [17:26:31.597] ...future.value <- base::withVisible(base::local({ [17:26:31.597] 2 [17:26:31.597] })) [17:26:31.597] future::FutureResult(value = ...future.value$value, [17:26:31.597] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.597] ...future.rng), globalenv = if (FALSE) [17:26:31.597] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.597] ...future.globalenv.names)) [17:26:31.597] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.597] }, condition = base::local({ [17:26:31.597] c <- base::c [17:26:31.597] inherits <- base::inherits [17:26:31.597] invokeRestart <- base::invokeRestart [17:26:31.597] length <- base::length [17:26:31.597] list <- base::list [17:26:31.597] seq.int <- base::seq.int [17:26:31.597] signalCondition <- base::signalCondition [17:26:31.597] sys.calls <- base::sys.calls [17:26:31.597] `[[` <- base::`[[` [17:26:31.597] `+` <- base::`+` [17:26:31.597] `<<-` <- base::`<<-` [17:26:31.597] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.597] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.597] 3L)] [17:26:31.597] } [17:26:31.597] function(cond) { [17:26:31.597] is_error <- inherits(cond, "error") [17:26:31.597] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.597] NULL) [17:26:31.597] if (is_error) { [17:26:31.597] sessionInformation <- function() { [17:26:31.597] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.597] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.597] search = base::search(), system = base::Sys.info()) [17:26:31.597] } [17:26:31.597] ...future.conditions[[length(...future.conditions) + [17:26:31.597] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.597] cond$call), session = sessionInformation(), [17:26:31.597] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.597] signalCondition(cond) [17:26:31.597] } [17:26:31.597] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.597] "immediateCondition"))) { [17:26:31.597] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.597] ...future.conditions[[length(...future.conditions) + [17:26:31.597] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.597] if (TRUE && !signal) { [17:26:31.597] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.597] { [17:26:31.597] inherits <- base::inherits [17:26:31.597] invokeRestart <- base::invokeRestart [17:26:31.597] is.null <- base::is.null [17:26:31.597] muffled <- FALSE [17:26:31.597] if (inherits(cond, "message")) { [17:26:31.597] muffled <- grepl(pattern, "muffleMessage") [17:26:31.597] if (muffled) [17:26:31.597] invokeRestart("muffleMessage") [17:26:31.597] } [17:26:31.597] else if (inherits(cond, "warning")) { [17:26:31.597] muffled <- grepl(pattern, "muffleWarning") [17:26:31.597] if (muffled) [17:26:31.597] invokeRestart("muffleWarning") [17:26:31.597] } [17:26:31.597] else if (inherits(cond, "condition")) { [17:26:31.597] if (!is.null(pattern)) { [17:26:31.597] computeRestarts <- base::computeRestarts [17:26:31.597] grepl <- base::grepl [17:26:31.597] restarts <- computeRestarts(cond) [17:26:31.597] for (restart in restarts) { [17:26:31.597] name <- restart$name [17:26:31.597] if (is.null(name)) [17:26:31.597] next [17:26:31.597] if (!grepl(pattern, name)) [17:26:31.597] next [17:26:31.597] invokeRestart(restart) [17:26:31.597] muffled <- TRUE [17:26:31.597] break [17:26:31.597] } [17:26:31.597] } [17:26:31.597] } [17:26:31.597] invisible(muffled) [17:26:31.597] } [17:26:31.597] muffleCondition(cond, pattern = "^muffle") [17:26:31.597] } [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] if (TRUE) { [17:26:31.597] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.597] { [17:26:31.597] inherits <- base::inherits [17:26:31.597] invokeRestart <- base::invokeRestart [17:26:31.597] is.null <- base::is.null [17:26:31.597] muffled <- FALSE [17:26:31.597] if (inherits(cond, "message")) { [17:26:31.597] muffled <- grepl(pattern, "muffleMessage") [17:26:31.597] if (muffled) [17:26:31.597] invokeRestart("muffleMessage") [17:26:31.597] } [17:26:31.597] else if (inherits(cond, "warning")) { [17:26:31.597] muffled <- grepl(pattern, "muffleWarning") [17:26:31.597] if (muffled) [17:26:31.597] invokeRestart("muffleWarning") [17:26:31.597] } [17:26:31.597] else if (inherits(cond, "condition")) { [17:26:31.597] if (!is.null(pattern)) { [17:26:31.597] computeRestarts <- base::computeRestarts [17:26:31.597] grepl <- base::grepl [17:26:31.597] restarts <- computeRestarts(cond) [17:26:31.597] for (restart in restarts) { [17:26:31.597] name <- restart$name [17:26:31.597] if (is.null(name)) [17:26:31.597] next [17:26:31.597] if (!grepl(pattern, name)) [17:26:31.597] next [17:26:31.597] invokeRestart(restart) [17:26:31.597] muffled <- TRUE [17:26:31.597] break [17:26:31.597] } [17:26:31.597] } [17:26:31.597] } [17:26:31.597] invisible(muffled) [17:26:31.597] } [17:26:31.597] muffleCondition(cond, pattern = "^muffle") [17:26:31.597] } [17:26:31.597] } [17:26:31.597] } [17:26:31.597] })) [17:26:31.597] }, error = function(ex) { [17:26:31.597] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.597] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.597] ...future.rng), started = ...future.startTime, [17:26:31.597] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.597] version = "1.8"), class = "FutureResult") [17:26:31.597] }, finally = { [17:26:31.597] if (!identical(...future.workdir, getwd())) [17:26:31.597] setwd(...future.workdir) [17:26:31.597] { [17:26:31.597] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.597] ...future.oldOptions$nwarnings <- NULL [17:26:31.597] } [17:26:31.597] base::options(...future.oldOptions) [17:26:31.597] if (.Platform$OS.type == "windows") { [17:26:31.597] old_names <- names(...future.oldEnvVars) [17:26:31.597] envs <- base::Sys.getenv() [17:26:31.597] names <- names(envs) [17:26:31.597] common <- intersect(names, old_names) [17:26:31.597] added <- setdiff(names, old_names) [17:26:31.597] removed <- setdiff(old_names, names) [17:26:31.597] changed <- common[...future.oldEnvVars[common] != [17:26:31.597] envs[common]] [17:26:31.597] NAMES <- toupper(changed) [17:26:31.597] args <- list() [17:26:31.597] for (kk in seq_along(NAMES)) { [17:26:31.597] name <- changed[[kk]] [17:26:31.597] NAME <- NAMES[[kk]] [17:26:31.597] if (name != NAME && is.element(NAME, old_names)) [17:26:31.597] next [17:26:31.597] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.597] } [17:26:31.597] NAMES <- toupper(added) [17:26:31.597] for (kk in seq_along(NAMES)) { [17:26:31.597] name <- added[[kk]] [17:26:31.597] NAME <- NAMES[[kk]] [17:26:31.597] if (name != NAME && is.element(NAME, old_names)) [17:26:31.597] next [17:26:31.597] args[[name]] <- "" [17:26:31.597] } [17:26:31.597] NAMES <- toupper(removed) [17:26:31.597] for (kk in seq_along(NAMES)) { [17:26:31.597] name <- removed[[kk]] [17:26:31.597] NAME <- NAMES[[kk]] [17:26:31.597] if (name != NAME && is.element(NAME, old_names)) [17:26:31.597] next [17:26:31.597] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.597] } [17:26:31.597] if (length(args) > 0) [17:26:31.597] base::do.call(base::Sys.setenv, args = args) [17:26:31.597] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.597] } [17:26:31.597] { [17:26:31.597] if (base::length(...future.futureOptionsAdded) > [17:26:31.597] 0L) { [17:26:31.597] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.597] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.597] base::options(opts) [17:26:31.597] } [17:26:31.597] { [17:26:31.597] { [17:26:31.597] NULL [17:26:31.597] RNGkind("Mersenne-Twister") [17:26:31.597] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.597] inherits = FALSE) [17:26:31.597] } [17:26:31.597] options(future.plan = NULL) [17:26:31.597] if (is.na(NA_character_)) [17:26:31.597] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.597] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.597] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.597] .init = FALSE) [17:26:31.597] } [17:26:31.597] } [17:26:31.597] } [17:26:31.597] }) [17:26:31.597] if (TRUE) { [17:26:31.597] base::sink(type = "output", split = FALSE) [17:26:31.597] if (TRUE) { [17:26:31.597] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.597] } [17:26:31.597] else { [17:26:31.597] ...future.result["stdout"] <- base::list(NULL) [17:26:31.597] } [17:26:31.597] base::close(...future.stdout) [17:26:31.597] ...future.stdout <- NULL [17:26:31.597] } [17:26:31.597] ...future.result$conditions <- ...future.conditions [17:26:31.597] ...future.result$finished <- base::Sys.time() [17:26:31.597] ...future.result [17:26:31.597] } [17:26:31.604] plan(): Setting new future strategy stack: [17:26:31.604] List of future strategies: [17:26:31.604] 1. sequential: [17:26:31.604] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.604] - tweaked: FALSE [17:26:31.604] - call: NULL [17:26:31.605] plan(): nbrOfWorkers() = 1 [17:26:31.607] plan(): Setting new future strategy stack: [17:26:31.607] List of future strategies: [17:26:31.607] 1. sequential: [17:26:31.607] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.607] - tweaked: FALSE [17:26:31.607] - call: future::plan("sequential") [17:26:31.608] plan(): nbrOfWorkers() = 1 [17:26:31.609] SequentialFuture started (and completed) [17:26:31.609] - Launch lazy future ... done [17:26:31.609] run() for 'SequentialFuture' ... done SequentialFuture: Label: '' Expression: { 2 } Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' *** FutureRegistry('rscript', 'reset') ... *** FutureRegistry('rscript', 'list') ... list() > > > message("*** FutureRegistry() - exceptions ...") *** FutureRegistry() - exceptions ... > > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 0) > > f <- future(1) [17:26:31.611] getGlobalsAndPackages() ... [17:26:31.611] Searching for globals... [17:26:31.612] [17:26:31.612] Searching for globals ... DONE [17:26:31.613] - globals: [0] [17:26:31.613] getGlobalsAndPackages() ... DONE [17:26:31.613] run() for 'Future' ... [17:26:31.614] - state: 'created' [17:26:31.614] - Future backend: 'FutureStrategy', 'sequential', 'uniprocess', 'future', 'function' [17:26:31.615] - Future class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' [17:26:31.615] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... [17:26:31.615] - Field: 'label' [17:26:31.616] - Field: 'local' [17:26:31.616] - Field: 'owner' [17:26:31.616] - Field: 'envir' [17:26:31.617] - Field: 'packages' [17:26:31.617] - Field: 'gc' [17:26:31.617] - Field: 'conditions' [17:26:31.618] - Field: 'expr' [17:26:31.618] - Field: 'uuid' [17:26:31.618] - Field: 'seed' [17:26:31.618] - Field: 'version' [17:26:31.619] - Field: 'result' [17:26:31.619] - Field: 'asynchronous' [17:26:31.619] - Field: 'calls' [17:26:31.620] - Field: 'globals' [17:26:31.620] - Field: 'stdout' [17:26:31.620] - Field: 'earlySignal' [17:26:31.621] - Field: 'lazy' [17:26:31.621] - Field: 'state' [17:26:31.621] - Copy elements of temporary 'SequentialFuture' to final 'Future' object ... done [17:26:31.622] - Launch lazy future ... [17:26:31.622] Packages needed by the future expression (n = 0): [17:26:31.622] Packages needed by future strategies (n = 0): [17:26:31.623] { [17:26:31.623] { [17:26:31.623] { [17:26:31.623] ...future.startTime <- base::Sys.time() [17:26:31.623] { [17:26:31.623] { [17:26:31.623] { [17:26:31.623] base::local({ [17:26:31.623] has_future <- base::requireNamespace("future", [17:26:31.623] quietly = TRUE) [17:26:31.623] if (has_future) { [17:26:31.623] ns <- base::getNamespace("future") [17:26:31.623] version <- ns[[".package"]][["version"]] [17:26:31.623] if (is.null(version)) [17:26:31.623] version <- utils::packageVersion("future") [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] version <- NULL [17:26:31.623] } [17:26:31.623] if (!has_future || version < "1.8.0") { [17:26:31.623] info <- base::c(r_version = base::gsub("R version ", [17:26:31.623] "", base::R.version$version.string), [17:26:31.623] platform = base::sprintf("%s (%s-bit)", [17:26:31.623] base::R.version$platform, 8 * base::.Machine$sizeof.pointer), [17:26:31.623] os = base::paste(base::Sys.info()[base::c("sysname", [17:26:31.623] "release", "version")], collapse = " "), [17:26:31.623] hostname = base::Sys.info()[["nodename"]]) [17:26:31.623] info <- base::sprintf("%s: %s", base::names(info), [17:26:31.623] info) [17:26:31.623] info <- base::paste(info, collapse = "; ") [17:26:31.623] if (!has_future) { [17:26:31.623] msg <- base::sprintf("Package 'future' is not installed on worker (%s)", [17:26:31.623] info) [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] msg <- base::sprintf("Package 'future' on worker (%s) must be of version >= 1.8.0: %s", [17:26:31.623] info, version) [17:26:31.623] } [17:26:31.623] base::stop(msg) [17:26:31.623] } [17:26:31.623] }) [17:26:31.623] } [17:26:31.623] ...future.strategy.old <- future::plan("list") [17:26:31.623] options(future.plan = NULL) [17:26:31.623] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.623] future::plan("default", .cleanup = FALSE, .init = FALSE) [17:26:31.623] } [17:26:31.623] ...future.workdir <- getwd() [17:26:31.623] } [17:26:31.623] ...future.oldOptions <- base::as.list(base::.Options) [17:26:31.623] ...future.oldEnvVars <- base::Sys.getenv() [17:26:31.623] } [17:26:31.623] base::options(future.startup.script = FALSE, future.globals.onMissing = NULL, [17:26:31.623] future.globals.maxSize = NULL, future.globals.method = NULL, [17:26:31.623] future.globals.onMissing = NULL, future.globals.onReference = NULL, [17:26:31.623] future.globals.resolve = NULL, future.resolve.recursive = NULL, [17:26:31.623] future.rng.onMisuse = NULL, future.rng.onMisuse.keepFuture = NULL, [17:26:31.623] future.stdout.windows.reencode = NULL, width = 80L) [17:26:31.623] ...future.futureOptionsAdded <- base::setdiff(base::names(base::.Options), [17:26:31.623] base::names(...future.oldOptions)) [17:26:31.623] } [17:26:31.623] if (FALSE) { [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] if (TRUE) { [17:26:31.623] ...future.stdout <- base::rawConnection(base::raw(0L), [17:26:31.623] open = "w") [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] ...future.stdout <- base::file(base::switch(.Platform$OS.type, [17:26:31.623] windows = "NUL", "/dev/null"), open = "w") [17:26:31.623] } [17:26:31.623] base::sink(...future.stdout, type = "output", split = FALSE) [17:26:31.623] base::on.exit(if (!base::is.null(...future.stdout)) { [17:26:31.623] base::sink(type = "output", split = FALSE) [17:26:31.623] base::close(...future.stdout) [17:26:31.623] }, add = TRUE) [17:26:31.623] } [17:26:31.623] ...future.frame <- base::sys.nframe() [17:26:31.623] ...future.conditions <- base::list() [17:26:31.623] ...future.rng <- base::globalenv()$.Random.seed [17:26:31.623] if (FALSE) { [17:26:31.623] ...future.globalenv.names <- c(base::names(base::.GlobalEnv), [17:26:31.623] "...future.value", "...future.globalenv.names", ".Random.seed") [17:26:31.623] } [17:26:31.623] ...future.result <- base::tryCatch({ [17:26:31.623] base::withCallingHandlers({ [17:26:31.623] ...future.value <- base::withVisible(base::local(1)) [17:26:31.623] future::FutureResult(value = ...future.value$value, [17:26:31.623] visible = ...future.value$visible, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.623] ...future.rng), globalenv = if (FALSE) [17:26:31.623] list(added = base::setdiff(base::names(base::.GlobalEnv), [17:26:31.623] ...future.globalenv.names)) [17:26:31.623] else NULL, started = ...future.startTime, version = "1.8") [17:26:31.623] }, condition = base::local({ [17:26:31.623] c <- base::c [17:26:31.623] inherits <- base::inherits [17:26:31.623] invokeRestart <- base::invokeRestart [17:26:31.623] length <- base::length [17:26:31.623] list <- base::list [17:26:31.623] seq.int <- base::seq.int [17:26:31.623] signalCondition <- base::signalCondition [17:26:31.623] sys.calls <- base::sys.calls [17:26:31.623] `[[` <- base::`[[` [17:26:31.623] `+` <- base::`+` [17:26:31.623] `<<-` <- base::`<<-` [17:26:31.623] sysCalls <- function(calls = sys.calls(), from = 1L) { [17:26:31.623] calls[seq.int(from = from + 12L, to = length(calls) - [17:26:31.623] 3L)] [17:26:31.623] } [17:26:31.623] function(cond) { [17:26:31.623] is_error <- inherits(cond, "error") [17:26:31.623] ignore <- !is_error && !is.null(NULL) && inherits(cond, [17:26:31.623] NULL) [17:26:31.623] if (is_error) { [17:26:31.623] sessionInformation <- function() { [17:26:31.623] list(r = base::R.Version(), locale = base::Sys.getlocale(), [17:26:31.623] rngkind = base::RNGkind(), namespaces = base::loadedNamespaces(), [17:26:31.623] search = base::search(), system = base::Sys.info()) [17:26:31.623] } [17:26:31.623] ...future.conditions[[length(...future.conditions) + [17:26:31.623] 1L]] <<- list(condition = cond, calls = c(sysCalls(from = ...future.frame), [17:26:31.623] cond$call), session = sessionInformation(), [17:26:31.623] timestamp = base::Sys.time(), signaled = 0L) [17:26:31.623] signalCondition(cond) [17:26:31.623] } [17:26:31.623] else if (!ignore && TRUE && inherits(cond, c("condition", [17:26:31.623] "immediateCondition"))) { [17:26:31.623] signal <- TRUE && inherits(cond, "immediateCondition") [17:26:31.623] ...future.conditions[[length(...future.conditions) + [17:26:31.623] 1L]] <<- list(condition = cond, signaled = base::as.integer(signal)) [17:26:31.623] if (TRUE && !signal) { [17:26:31.623] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.623] { [17:26:31.623] inherits <- base::inherits [17:26:31.623] invokeRestart <- base::invokeRestart [17:26:31.623] is.null <- base::is.null [17:26:31.623] muffled <- FALSE [17:26:31.623] if (inherits(cond, "message")) { [17:26:31.623] muffled <- grepl(pattern, "muffleMessage") [17:26:31.623] if (muffled) [17:26:31.623] invokeRestart("muffleMessage") [17:26:31.623] } [17:26:31.623] else if (inherits(cond, "warning")) { [17:26:31.623] muffled <- grepl(pattern, "muffleWarning") [17:26:31.623] if (muffled) [17:26:31.623] invokeRestart("muffleWarning") [17:26:31.623] } [17:26:31.623] else if (inherits(cond, "condition")) { [17:26:31.623] if (!is.null(pattern)) { [17:26:31.623] computeRestarts <- base::computeRestarts [17:26:31.623] grepl <- base::grepl [17:26:31.623] restarts <- computeRestarts(cond) [17:26:31.623] for (restart in restarts) { [17:26:31.623] name <- restart$name [17:26:31.623] if (is.null(name)) [17:26:31.623] next [17:26:31.623] if (!grepl(pattern, name)) [17:26:31.623] next [17:26:31.623] invokeRestart(restart) [17:26:31.623] muffled <- TRUE [17:26:31.623] break [17:26:31.623] } [17:26:31.623] } [17:26:31.623] } [17:26:31.623] invisible(muffled) [17:26:31.623] } [17:26:31.623] muffleCondition(cond, pattern = "^muffle") [17:26:31.623] } [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] if (TRUE) { [17:26:31.623] muffleCondition <- function (cond, pattern = "^muffle") [17:26:31.623] { [17:26:31.623] inherits <- base::inherits [17:26:31.623] invokeRestart <- base::invokeRestart [17:26:31.623] is.null <- base::is.null [17:26:31.623] muffled <- FALSE [17:26:31.623] if (inherits(cond, "message")) { [17:26:31.623] muffled <- grepl(pattern, "muffleMessage") [17:26:31.623] if (muffled) [17:26:31.623] invokeRestart("muffleMessage") [17:26:31.623] } [17:26:31.623] else if (inherits(cond, "warning")) { [17:26:31.623] muffled <- grepl(pattern, "muffleWarning") [17:26:31.623] if (muffled) [17:26:31.623] invokeRestart("muffleWarning") [17:26:31.623] } [17:26:31.623] else if (inherits(cond, "condition")) { [17:26:31.623] if (!is.null(pattern)) { [17:26:31.623] computeRestarts <- base::computeRestarts [17:26:31.623] grepl <- base::grepl [17:26:31.623] restarts <- computeRestarts(cond) [17:26:31.623] for (restart in restarts) { [17:26:31.623] name <- restart$name [17:26:31.623] if (is.null(name)) [17:26:31.623] next [17:26:31.623] if (!grepl(pattern, name)) [17:26:31.623] next [17:26:31.623] invokeRestart(restart) [17:26:31.623] muffled <- TRUE [17:26:31.623] break [17:26:31.623] } [17:26:31.623] } [17:26:31.623] } [17:26:31.623] invisible(muffled) [17:26:31.623] } [17:26:31.623] muffleCondition(cond, pattern = "^muffle") [17:26:31.623] } [17:26:31.623] } [17:26:31.623] } [17:26:31.623] })) [17:26:31.623] }, error = function(ex) { [17:26:31.623] base::structure(base::list(value = NULL, visible = NULL, [17:26:31.623] conditions = ...future.conditions, rng = !identical(base::globalenv()$.Random.seed, [17:26:31.623] ...future.rng), started = ...future.startTime, [17:26:31.623] finished = Sys.time(), session_uuid = NA_character_, [17:26:31.623] version = "1.8"), class = "FutureResult") [17:26:31.623] }, finally = { [17:26:31.623] if (!identical(...future.workdir, getwd())) [17:26:31.623] setwd(...future.workdir) [17:26:31.623] { [17:26:31.623] if (identical(getOption("nwarnings"), ...future.oldOptions$nwarnings)) { [17:26:31.623] ...future.oldOptions$nwarnings <- NULL [17:26:31.623] } [17:26:31.623] base::options(...future.oldOptions) [17:26:31.623] if (.Platform$OS.type == "windows") { [17:26:31.623] old_names <- names(...future.oldEnvVars) [17:26:31.623] envs <- base::Sys.getenv() [17:26:31.623] names <- names(envs) [17:26:31.623] common <- intersect(names, old_names) [17:26:31.623] added <- setdiff(names, old_names) [17:26:31.623] removed <- setdiff(old_names, names) [17:26:31.623] changed <- common[...future.oldEnvVars[common] != [17:26:31.623] envs[common]] [17:26:31.623] NAMES <- toupper(changed) [17:26:31.623] args <- list() [17:26:31.623] for (kk in seq_along(NAMES)) { [17:26:31.623] name <- changed[[kk]] [17:26:31.623] NAME <- NAMES[[kk]] [17:26:31.623] if (name != NAME && is.element(NAME, old_names)) [17:26:31.623] next [17:26:31.623] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.623] } [17:26:31.623] NAMES <- toupper(added) [17:26:31.623] for (kk in seq_along(NAMES)) { [17:26:31.623] name <- added[[kk]] [17:26:31.623] NAME <- NAMES[[kk]] [17:26:31.623] if (name != NAME && is.element(NAME, old_names)) [17:26:31.623] next [17:26:31.623] args[[name]] <- "" [17:26:31.623] } [17:26:31.623] NAMES <- toupper(removed) [17:26:31.623] for (kk in seq_along(NAMES)) { [17:26:31.623] name <- removed[[kk]] [17:26:31.623] NAME <- NAMES[[kk]] [17:26:31.623] if (name != NAME && is.element(NAME, old_names)) [17:26:31.623] next [17:26:31.623] args[[name]] <- ...future.oldEnvVars[[name]] [17:26:31.623] } [17:26:31.623] if (length(args) > 0) [17:26:31.623] base::do.call(base::Sys.setenv, args = args) [17:26:31.623] args <- names <- old_names <- NAMES <- envs <- common <- added <- removed <- NULL [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] base::do.call(base::Sys.setenv, args = base::as.list(...future.oldEnvVars)) [17:26:31.623] } [17:26:31.623] { [17:26:31.623] if (base::length(...future.futureOptionsAdded) > [17:26:31.623] 0L) { [17:26:31.623] opts <- base::vector("list", length = base::length(...future.futureOptionsAdded)) [17:26:31.623] base::names(opts) <- ...future.futureOptionsAdded [17:26:31.623] base::options(opts) [17:26:31.623] } [17:26:31.623] { [17:26:31.623] { [17:26:31.623] NULL [17:26:31.623] RNGkind("Mersenne-Twister") [17:26:31.623] base::rm(list = ".Random.seed", envir = base::globalenv(), [17:26:31.623] inherits = FALSE) [17:26:31.623] } [17:26:31.623] options(future.plan = NULL) [17:26:31.623] if (is.na(NA_character_)) [17:26:31.623] Sys.unsetenv("R_FUTURE_PLAN") [17:26:31.623] else Sys.setenv(R_FUTURE_PLAN = NA_character_) [17:26:31.623] future::plan(...future.strategy.old, .cleanup = FALSE, [17:26:31.623] .init = FALSE) [17:26:31.623] } [17:26:31.623] } [17:26:31.623] } [17:26:31.623] }) [17:26:31.623] if (TRUE) { [17:26:31.623] base::sink(type = "output", split = FALSE) [17:26:31.623] if (TRUE) { [17:26:31.623] ...future.result$stdout <- base::rawToChar(base::rawConnectionValue(...future.stdout)) [17:26:31.623] } [17:26:31.623] else { [17:26:31.623] ...future.result["stdout"] <- base::list(NULL) [17:26:31.623] } [17:26:31.623] base::close(...future.stdout) [17:26:31.623] ...future.stdout <- NULL [17:26:31.623] } [17:26:31.623] ...future.result$conditions <- ...future.conditions [17:26:31.623] ...future.result$finished <- base::Sys.time() [17:26:31.623] ...future.result [17:26:31.623] } [17:26:31.633] plan(): Setting new future strategy stack: [17:26:31.633] List of future strategies: [17:26:31.633] 1. sequential: [17:26:31.633] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.633] - tweaked: FALSE [17:26:31.633] - call: NULL [17:26:31.634] plan(): nbrOfWorkers() = 1 [17:26:31.636] plan(): Setting new future strategy stack: [17:26:31.636] List of future strategies: [17:26:31.636] 1. sequential: [17:26:31.636] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.636] - tweaked: FALSE [17:26:31.636] - call: future::plan("sequential") [17:26:31.637] plan(): nbrOfWorkers() = 1 [17:26:31.638] SequentialFuture started (and completed) [17:26:31.638] - Launch lazy future ... done [17:26:31.638] run() for 'SequentialFuture' ... done > FutureRegistry(where = "test", action = "add", future = f) [[1]] SequentialFuture: Label: '' Expression: [1] 1 Lazy evaluation: FALSE Asynchronous evaluation: FALSE Local evaluation: TRUE Environment: R_GlobalEnv Capture standard output: TRUE Capture condition classes: 'condition' (excluding 'nothing') Globals: Packages: L'Ecuyer-CMRG RNG seed: (seed = FALSE) Resolved: TRUE Value: 39 bytes of class 'numeric' Early signaling: FALSE Owner process: b7b35427-77a1-c7a7-0f11-19d562be2457 Class: 'SequentialFuture', 'UniprocessFuture', 'Future', 'environment' > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 1) > > res <- tryCatch(FutureRegistry(where = "test", action = "add", future = f), error = identity) [17:26:31.640] ERROR: Cannot add to 'test' registry. SequentialFuture is already registered. > stopifnot(inherits(res, "error")) > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 1) > > > FutureRegistry(where = "test", action = "remove", future = f) list() > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 0) > > res <- tryCatch(FutureRegistry(where = "test", action = "remove", future = f), error = identity) [17:26:31.641] ERROR: Cannot remove from 'test' registry. SequentialFuture not registered. > stopifnot(inherits(res, "error")) > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 0) > > FutureRegistry(where = "test", action = "reset") list() > futures <- FutureRegistry(where = "test", action = "list") > stopifnot(length(futures) == 0) > > res <- tryCatch(FutureRegistry(where = "test", action = ""), error = identity) [17:26:31.641] INTERNAL ERROR: Unknown action to 'test' registry: > stopifnot(inherits(res, "error")) > > message("*** FutureRegistry() - exceptions ... DONE") *** FutureRegistry() - exceptions ... DONE > > > message("*** FutureRegistry() ... DONE") *** FutureRegistry() ... DONE > > source("incl/end.R") [17:26:31.643] plan(): Setting new future strategy stack: [17:26:31.644] List of future strategies: [17:26:31.644] 1. FutureStrategy: [17:26:31.644] - args: function (..., envir = parent.frame(), workers = "") [17:26:31.644] - tweaked: FALSE [17:26:31.644] - call: future::plan(oplan) [17:26:31.671] plan(): nbrOfWorkers() = 1 Failed to undo environment variables: - Expected environment variables: [n=205] '!ExitCode', 'ALLUSERSPROFILE', 'APPDATA', 'BIBINPUTS', 'BINDIR', 'BSTINPUTS', 'COMMONPROGRAMFILES', 'COMPUTERNAME', 'COMSPEC', 'CURL_CA_BUNDLE', 'CYGWIN', 'CommonProgramFiles(x86)', 'CommonProgramW6432', 'DriverData', 'HOME', 'HOMEDRIVE', 'HOMEPATH', 'JAGS_ROOT', 'JAVA_HOME', 'LANGUAGE', 'LC_COLLATE', 'LC_MONETARY', 'LC_TIME', 'LOCALAPPDATA', 'LOGONSERVER', 'LS_HOME', 'LS_LICENSE_PATH', 'MAKE', 'MAKEFLAGS', 'MAKELEVEL', 'MFLAGS', 'MSMPI_BENCHMARKS', 'MSMPI_BIN', 'MSYS2_ENV_CONV_EXCL', 'NUMBER_OF_PROCESSORS', 'OCL', 'OMP_THREAD_LIMIT', 'OS', 'PATH', 'PATHEXT', 'PROCESSOR_ARCHITECTURE', 'PROCESSOR_IDENTIFIER', 'PROCESSOR_LEVEL', 'PROCESSOR_REVISION', 'PROGRAMFILES', 'PROMPT', 'PSModulePath', 'PUBLIC', 'PWD', 'ProgramData', 'ProgramFiles(x86)', 'ProgramW6432', 'RTOOLS43_HOME', 'RTOOLS44_HOME', 'R_ARCH', 'R_BROWSER', 'R_BZIPCMD', 'R_CMD', 'R_COMPILED_BY', 'R_CRAN_WEB', 'R_CUSTOM_TOOLS_PATH', 'R_CUSTOM_TOOLS_SOFT', 'R_DOC_DIR', 'R_ENVIRON_USER', 'R_GSCMD', 'R_GZIPCMD', 'R_HOME', 'R_INCLUDE_DIR', 'R_INSTALL_TAR', 'R_LIBS', 'R_LIBS_SITE', 'R_LIBS_USER', 'R_MAX_NUM_DLLS', 'R_OSTYPE', 'R_PAPERSIZE', 'R_PAPERSIZE_USER', 'R_PARALLELLY_MAKENODEPSOCK_AUTOKILL', 'R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT', 'R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL', 'R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS', 'R_PARALLELLY_MAKENODEPSOCK_TIMEOUT', 'R_PARALLELLY_RANDOM_PORTS', 'R_PARALLEL_PORT', 'R_RD4PDF', 'R_RTOOLS44_PATH', 'R_SCRIPT_LEGACY', 'R_SHARE_DIR', 'R_TESTS', 'R_UNZIPCMD', 'R_USER', 'R_VERSION', 'R_ZIPCMD', 'SED', 'SHLVL', 'SYSTEMDRIVE', 'SYSTEMROOT', 'TAR', 'TAR_OPTIONS', 'TEMP', 'TERM', 'TEXINPUTS', 'TMP', 'TMPDIR', 'USERDOMAIN', 'USERDOMAIN_ROAMINGPROFILE', 'USERNAME', 'USERPROFILE', 'WINDIR', '_', '_R_CHECK_AUTOCONF_', '_R_CHECK_BOGUS_RETURN_', '_R_CHECK_BROWSER_NONINTERACTIVE_', '_R_CHECK_BUILD_VIGNETTES_SEPARATELY_', '_R_CHECK_CODETOOLS_PROFILE_', '_R_CHECK_CODE_ASSIGN_TO_GLOBALENV_', '_R_CHECK_CODE_ATTACH_', '_R_CHECK_CODE_CLASS_IS_STRING_', '_R_CHECK_CODE_DATA_INTO_GLOBALENV_', '_R_CHECK_CODE_USAGE_VIA_NAMESPACES_', '_R_CHECK_CODE_USAGE_WITHOUT_LOADING_', '_R_CHECK_CODE_USAGE_WITH_ONLY_BASE_ATTACHED_', '_R_CHECK_CODOC_VARIABLES_IN_USAGES_', '_R_CHECK_COMPACT_DATA2_', '_R_CHECK_COMPILATION_FLAGS_', '_R_CHECK_CONNECTIONS_LEFT_OPEN_', '_R_CHECK_CRAN_INCOMING_', '_R_CHECK_CRAN_INCOMING_CHECK_FILE_URIS_', '_R_CHECK_CRAN_INCOMING_CHECK_URLS_IN_PARALLEL_', '_R_CHECK_CRAN_INCOMING_NOTE_GNU_MAKE_', '_R_CHECK_CRAN_INCOMING_REMOTE_', '_R_CHECK_CRAN_INCOMING_USE_ASPELL_', '_R_CHECK_DATALIST_', '_R_CHECK_DEPRECATED_DEFUNCT_', '_R_CHECK_DOC_SIZES2_', '_R_CHECK_DOT_FIRSTLIB_', '_R_CHECK_DOT_INTERNAL_', '_R_CHECK_EXAMPLE_TIMING_THRESHOLD_', '_R_CHECK_EXECUTABLES_', '_R_CHECK_EXECUTABLES_EXCLUSIONS_', '_R_CHECK_FF_CALLS_', '_R_CHECK_FF_DUP_', '_R_CHECK_FORCE_SUGGESTS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_LEEWAY_', '_R_CHECK_HAVE_MYSQL_', '_R_CHECK_HAVE_ODBC_', '_R_CHECK_HAVE_PERL_', '_R_CHECK_HAVE_POSTGRES_', '_R_CHECK_INSTALL_DEPENDS_', '_R_CHECK_INTERNALS2_', '_R_CHECK_LENGTH_1_CONDITION_', '_R_CHECK_LICENSE_', '_R_CHECK_LIMIT_CORES_', '_R_CHECK_MATRIX_DATA_', '_R_CHECK_MBCS_CONVERSION_FAILURE_', '_R_CHECK_NATIVE_ROUTINE_REGISTRATION_', '_R_CHECK_NEWS_IN_PLAIN_TEXT_', '_R_CHECK_NO_RECOMMENDED_', '_R_CHECK_NO_STOP_ON_TEST_ERROR_', '_R_CHECK_ORPHANED_', '_R_CHECK_OVERWRITE_REGISTERED_S3_METHODS_', '_R_CHECK_PACKAGES_USED_IGNORE_UNUSED_IMPORTS_', '_R_CHECK_PACKAGES_USED_IN_TESTS_USE_SUBDIRS_', '_R_CHECK_PACKAGE_DATASETS_SUPPRESS_NOTES_', '_R_CHECK_PACKAGE_NAME_', '_R_CHECK_PKG_SIZES_', '_R_CHECK_PKG_SIZES_THRESHOLD_', '_R_CHECK_PRAGMAS_', '_R_CHECK_RD_EXAMPLES_T_AND_F_', '_R_CHECK_RD_LINE_WIDTHS_', '_R_CHECK_RD_MATH_RENDERING_', '_R_CHECK_RD_NOTE_LOST_BRACES_', '_R_CHECK_RD_VALIDATE_RD2HTML_', '_R_CHECK_REPLACING_IMPORTS_', '_R_CHECK_R_DEPENDS_', '_R_CHECK_S3_METHODS_SHOW_POSSIBLE_ISSUES_', '_R_CHECK_SCREEN_DEVICE_', '_R_CHECK_SERIALIZATION_', '_R_CHECK_SHLIB_OPENMP_FLAGS_', '_R_CHECK_SRC_MINUS_W_IMPLICIT_', '_R_CHECK_SUBDIRS_NOCASE_', '_R_CHECK_SUGGESTS_ONLY_', '_R_CHECK_SYSTEM_CLOCK_', '_R_CHECK_TESTS_NLINES_', '_R_CHECK_TEST_TIMING_', '_R_CHECK_TIMINGS_', '_R_CHECK_TOPLEVEL_FILES_', '_R_CHECK_UNDOC_USE_ALL_NAMES_', '_R_CHECK_UNSAFE_CALLS_', '_R_CHECK_URLS_SHOW_301_STATUS_', '_R_CHECK_VC_DIRS_', '_R_CHECK_VIGNETTES_NLINES_', '_R_CHECK_VIGNETTES_SKIP_RUN_MAYBE_', '_R_CHECK_VIGNETTE_TIMING_', '_R_CHECK_VIGNETTE_TITLES_', '_R_CHECK_WINDOWS_DEVICE_', '_R_CHECK_XREFS_NOTE_MISSING_PACKAGE_ANCHORS_', '_R_CHECK_XREFS_USE_ALIASES_FROM_CRAN_', '_R_CLASS_MATRIX_ARRAY_', '_R_DEPRECATED_IS_R_', '_R_S3_METHOD_LOOKUP_BASEENV_AFTER_GLOBALENV_', '_R_SHLIB_BUILD_OBJECTS_SYMBOL_TABLES_', '__R_CHECK_DOC_FILES_NOTE_IF_ALL_SPECIAL__', 'maj.version', 'nextArg--timingsnextArg--install' - Environment variables still there: [n=0] - Environment variables missing: [n=1] 'MAKEFLAGS' Differences environment variable by environment variable: List of 3 $ name : chr "MAKEFLAGS" $ expected: 'Dlist' chr "" $ actual : 'Dlist' chr NA > > proc.time() user system elapsed 0.78 0.12 0.86