R Under development (unstable) (2023-06-30 r84625 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > source("incl/start,load-only.R") [18:03:29.714] plan(): Setting new future strategy stack: [18:03:29.715] List of future strategies: [18:03:29.715] 1. sequential: [18:03:29.715] - args: function (..., envir = parent.frame()) [18:03:29.715] - tweaked: FALSE [18:03:29.715] - call: future::plan("sequential") [18:03:29.731] plan(): nbrOfWorkers() = 1 > > message("*** whichIndex() ...") *** whichIndex() ... > > dims <- list( + c(1), + c(1, 1), + c(2), + c(2, 1), + c(3, 4, 3) + ) > > for (dim in dims) { + printf("Dimensions: (%s)\n", paste(dim, collapse = ", ")) + dimnames <- lapply(dim, FUN = function(n) letters[seq_len(n)]) + X <- array(seq_len(prod(dim)), dim = dim, dimnames = dimnames) + print(X) + + idxs <- unique(round(seq(from = 1L, to = length(X), length.out = 5))) + print(idxs) + stopifnot(all(X[idxs] == idxs)) + + ## (a) By matrix and dimindices + I <- arrayInd(idxs, .dim = dim(X)) + print(I) + idxs2 <- whichIndex(I, dim = dim(X)) + print(idxs2) + stopifnot(all(idxs2 == idxs)) + + ## (b) By matrix and dimnames + N <- array(NA_character_, dim = dim(I)) + for (kk in seq_len(ncol(N))) { + N[, kk] <- dimnames[[kk]][I[, kk]] + } + print(N) + idxs3 <- whichIndex(N, dim = dim(X), dimnames = dimnames(X)) + print(idxs3) + stopifnot(all(idxs3 == idxs)) + + ## (b) By data.frame + D <- as.data.frame(I) + for (cc in seq(from = 1L, to = ncol(D))) D[[cc]] <- N[, cc] + print(D) + idxs4 <- whichIndex(D, dim = dim(X), dimnames = dimnames(X)) + print(idxs4) + stopifnot(all(idxs4 == idxs)) + } Dimensions: (1) a 1 [1] 1 [,1] [1,] 1 [1] 1 [,1] [1,] "a" [1] 1 V1 1 a [1] 1 Dimensions: (1, 1) a a 1 [1] 1 [,1] [,2] [1,] 1 1 [1] 1 [,1] [,2] [1,] "a" "a" [1] 1 V1 V2 1 a a [1] 1 Dimensions: (2) a b 1 2 [1] 1 2 [,1] [1,] 1 [2,] 2 [1] 1 2 [,1] [1,] "a" [2,] "b" [1] 1 2 V1 1 a 2 b [1] 1 2 Dimensions: (2, 1) a a 1 b 2 [1] 1 2 [,1] [,2] [1,] 1 1 [2,] 2 1 [1] 1 2 [,1] [,2] [1,] "a" "a" [2,] "b" "a" [1] 1 2 V1 V2 1 a a 2 b a [1] 1 2 Dimensions: (3, 4, 3) , , a a b c d a 1 4 7 10 b 2 5 8 11 c 3 6 9 12 , , b a b c d a 13 16 19 22 b 14 17 20 23 c 15 18 21 24 , , c a b c d a 25 28 31 34 b 26 29 32 35 c 27 30 33 36 [1] 1 10 18 27 36 [,1] [,2] [,3] [1,] 1 1 1 [2,] 1 4 1 [3,] 3 2 2 [4,] 3 1 3 [5,] 3 4 3 [1] 1 10 18 27 36 [,1] [,2] [,3] [1,] "a" "a" "a" [2,] "a" "d" "a" [3,] "c" "b" "b" [4,] "c" "a" "c" [5,] "c" "d" "c" [1] 1 10 18 27 36 V1 V2 V3 1 a a a 2 a d a 3 c b b 4 c a c 5 c d c [1] 1 10 18 27 36 > > > ## Exceptions > dim <- c(2, 3) > ndim <- length(dim) > dimnames <- lapply(dim, FUN = function(n) letters[seq_len(n)]) > > I <- matrix(c(1, 1, 2, 4), ncol = ndim) > res <- try(idxs <- whichIndex(I, dim = dim, dimnames = dimnames), silent = TRUE) > stopifnot(inherits(res, "try-error")) > > I <- matrix(c(0, 0), ncol = ndim) > res <- try(idxs <- whichIndex(I, dim = dim, dimnames = dimnames), silent = TRUE) > stopifnot(inherits(res, "try-error")) > > I <- matrix(c("a", "q"), ncol = ndim) > res <- try(idxs <- whichIndex(I, dim = dim, dimnames = dimnames), silent = TRUE) > stopifnot(inherits(res, "try-error")) > > D <- data.frame(a = c(1, 1), b = c(2, 4)) > res <- try(idxs <- whichIndex(D, dim = dim, dimnames = dimnames), silent = TRUE) > stopifnot(inherits(res, "try-error")) > > D <- data.frame(a = c("a", "q"), b = c(1, 2), stringsAsFactors = FALSE) > res <- try(idxs <- whichIndex(D, dim = dim, dimnames = dimnames), silent = TRUE) > stopifnot(inherits(res, "try-error")) > > message("*** whichIndex() ... DONE") *** whichIndex() ... DONE > > source("incl/end.R") [18:03:29.775] plan(): Setting new future strategy stack: [18:03:29.775] List of future strategies: [18:03:29.775] 1. FutureStrategy: [18:03:29.775] - args: function (..., envir = parent.frame()) [18:03:29.775] - tweaked: FALSE [18:03:29.775] - call: future::plan(oplan) [18:03:29.788] plan(): nbrOfWorkers() = 1 Failed to undo environment variables: - Expected environment variables: [n=201] '!ExitCode', 'ALLUSERSPROFILE', 'APPDATA', 'BIBINPUTS', 'BINDIR', 'BSTINPUTS', 'COMMONPROGRAMFILES', 'COMPUTERNAME', 'COMSPEC', 'CURL_CA_BUNDLE', 'CYGWIN', 'CommonProgramFiles(x86)', 'CommonProgramW6432', 'DriverData', 'HOME', 'HOMEDRIVE', 'HOMEPATH', 'JAGS_ROOT', 'JAVA_HOME', 'LANGUAGE', 'LC_COLLATE', 'LC_MONETARY', 'LC_TIME', 'LOCALAPPDATA', 'LOGONSERVER', 'LS_HOME', 'LS_LICENSE_PATH', 'MAKE', 'MAKEFLAGS', 'MAKELEVEL', 'MFLAGS', 'MSMPI_BENCHMARKS', 'MSMPI_BIN', 'MSYS2_ENV_CONV_EXCL', 'NUMBER_OF_PROCESSORS', 'OMP_THREAD_LIMIT', 'OS', 'PATH', 'PATHEXT', 'PROCESSOR_ARCHITECTURE', 'PROCESSOR_IDENTIFIER', 'PROCESSOR_LEVEL', 'PROCESSOR_REVISION', 'PROGRAMFILES', 'PROMPT', 'PSModulePath', 'PUBLIC', 'PWD', 'ProgramData', 'ProgramFiles(x86)', 'ProgramW6432', 'RETICULATE_AUTOCONFIGURE', 'RTOOLS43_HOME', 'R_ARCH', 'R_BROWSER', 'R_BZIPCMD', 'R_CMD', 'R_COMPILED_BY', 'R_CRAN_WEB', 'R_CUSTOM_TOOLS_PATH', 'R_CUSTOM_TOOLS_SOFT', 'R_DOC_DIR', 'R_ENVIRON_USER', 'R_GSCMD', 'R_GZIPCMD', 'R_HOME', 'R_INCLUDE_DIR', 'R_INSTALL_TAR', 'R_LIBS', 'R_LIBS_SITE', 'R_LIBS_USER', 'R_MAX_NUM_DLLS', 'R_OSTYPE', 'R_PAPERSIZE', 'R_PAPERSIZE_USER', 'R_PARALLELLY_MAKENODEPSOCK_AUTOKILL', 'R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT', 'R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL', 'R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS', 'R_PARALLELLY_MAKENODEPSOCK_TIMEOUT', 'R_PARALLELLY_RANDOM_PORTS', 'R_PARALLEL_PORT', 'R_RD4PDF', 'R_RTOOLS43_PATH', 'R_SCRIPT_LEGACY', 'R_SHARE_DIR', 'R_TESTS', 'R_UNZIPCMD', 'R_USER', 'R_VERSION', 'R_ZIPCMD', 'SED', 'SHLVL', 'SYSTEMDRIVE', 'SYSTEMROOT', 'TAR', 'TAR_OPTIONS', 'TEMP', 'TERM', 'TEXINPUTS', 'TMP', 'TMPDIR', 'USERDOMAIN', 'USERDOMAIN_ROAMINGPROFILE', 'USERNAME', 'USERPROFILE', 'WINDIR', '_', '_R_CHECK_AUTOCONF_', '_R_CHECK_BOGUS_RETURN_', '_R_CHECK_BROWSER_NONINTERACTIVE_', '_R_CHECK_BUILD_VIGNETTES_SEPARATELY_', '_R_CHECK_CODETOOLS_PROFILE_', '_R_CHECK_CODE_ASSIGN_TO_GLOBALENV_', '_R_CHECK_CODE_ATTACH_', '_R_CHECK_CODE_CLASS_IS_STRING_', '_R_CHECK_CODE_DATA_INTO_GLOBALENV_', '_R_CHECK_CODE_USAGE_VIA_NAMESPACES_', '_R_CHECK_CODE_USAGE_WITHOUT_LOADING_', '_R_CHECK_CODE_USAGE_WITH_ONLY_BASE_ATTACHED_', '_R_CHECK_CODOC_VARIABLES_IN_USAGES_', '_R_CHECK_COMPACT_DATA2_', '_R_CHECK_COMPILATION_FLAGS_', '_R_CHECK_CONNECTIONS_LEFT_OPEN_', '_R_CHECK_CRAN_INCOMING_', '_R_CHECK_CRAN_INCOMING_CHECK_FILE_URIS_', '_R_CHECK_CRAN_INCOMING_CHECK_URLS_IN_PARALLEL_', '_R_CHECK_CRAN_INCOMING_NOTE_GNU_MAKE_', '_R_CHECK_CRAN_INCOMING_REMOTE_', '_R_CHECK_CRAN_INCOMING_USE_ASPELL_', '_R_CHECK_DATALIST_', '_R_CHECK_DEPRECATED_DEFUNCT_', '_R_CHECK_DOC_SIZES2_', '_R_CHECK_DOT_FIRSTLIB_', '_R_CHECK_DOT_INTERNAL_', '_R_CHECK_EXAMPLE_TIMING_THRESHOLD_', '_R_CHECK_EXECUTABLES_', '_R_CHECK_EXECUTABLES_EXCLUSIONS_', '_R_CHECK_FF_CALLS_', '_R_CHECK_FF_DUP_', '_R_CHECK_FORCE_SUGGESTS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_', '_R_CHECK_FUTURE_FILE_TIMESTAMPS_LEEWAY_', '_R_CHECK_HAVE_MYSQL_', '_R_CHECK_HAVE_ODBC_', '_R_CHECK_HAVE_PERL_', '_R_CHECK_HAVE_POSTGRES_', '_R_CHECK_INSTALL_DEPENDS_', '_R_CHECK_INTERNALS2_', '_R_CHECK_LENGTH_1_CONDITION_', '_R_CHECK_LICENSE_', '_R_CHECK_LIMIT_CORES_', '_R_CHECK_MATRIX_DATA_', '_R_CHECK_NATIVE_ROUTINE_REGISTRATION_', '_R_CHECK_NEWS_IN_PLAIN_TEXT_', '_R_CHECK_NO_RECOMMENDED_', '_R_CHECK_NO_STOP_ON_TEST_ERROR_', '_R_CHECK_ORPHANED_', '_R_CHECK_OVERWRITE_REGISTERED_S3_METHODS_', '_R_CHECK_PACKAGES_USED_IGNORE_UNUSED_IMPORTS_', '_R_CHECK_PACKAGES_USED_IN_TESTS_USE_SUBDIRS_', '_R_CHECK_PACKAGE_DATASETS_SUPPRESS_NOTES_', '_R_CHECK_PACKAGE_NAME_', '_R_CHECK_PKG_SIZES_', '_R_CHECK_PKG_SIZES_THRESHOLD_', '_R_CHECK_PRAGMAS_', '_R_CHECK_RD_EXAMPLES_T_AND_F_', '_R_CHECK_RD_LINE_WIDTHS_', '_R_CHECK_RD_MATH_RENDERING_', '_R_CHECK_RD_VALIDATE_RD2HTML_', '_R_CHECK_REPLACING_IMPORTS_', '_R_CHECK_R_DEPENDS_', '_R_CHECK_S3_METHODS_SHOW_POSSIBLE_ISSUES_', '_R_CHECK_SCREEN_DEVICE_', '_R_CHECK_SERIALIZATION_', '_R_CHECK_SHLIB_OPENMP_FLAGS_', '_R_CHECK_SRC_MINUS_W_IMPLICIT_', '_R_CHECK_SUBDIRS_NOCASE_', '_R_CHECK_SUBDIRS_STRICT_', '_R_CHECK_SUGGESTS_ONLY_', '_R_CHECK_SYSTEM_CLOCK_', '_R_CHECK_TESTS_NLINES_', '_R_CHECK_TEST_TIMING_', '_R_CHECK_TIMINGS_', '_R_CHECK_TOPLEVEL_FILES_', '_R_CHECK_UNDOC_USE_ALL_NAMES_', '_R_CHECK_UNSAFE_CALLS_', '_R_CHECK_URLS_SHOW_301_STATUS_', '_R_CHECK_VC_DIRS_', '_R_CHECK_VIGNETTES_NLINES_', '_R_CHECK_VIGNETTES_SKIP_RUN_MAYBE_', '_R_CHECK_VIGNETTE_TIMING_', '_R_CHECK_VIGNETTE_TITLES_', '_R_CHECK_WINDOWS_DEVICE_', '_R_CHECK_XREFS_USE_ALIASES_FROM_CRAN_', '_R_CLASS_MATRIX_ARRAY_', '_R_INSTALL_TIME_PATCHES_', '_R_S3_METHOD_LOOKUP_BASEENV_AFTER_GLOBALENV_', '_R_SHLIB_BUILD_OBJECTS_SYMBOL_TABLES_', 'maj.version', 'nextArg--timingsnextArg--install' - Environment variables still there: [n=0] - Environment variables missing: [n=1] 'MAKEFLAGS' Differences environment variable by environment variable: List of 3 $ name : chr "MAKEFLAGS" $ expected: 'Dlist' chr "" $ actual : 'Dlist' chr NA > > proc.time() user system elapsed 0.26 0.09 0.34