test_that("QC: outlier checks can be identified based on a data.frame with region-based values.", { testthat::skip_on_cran(); skip_if(tests_running_on_cran_under_macos(), message = "Skipping on CRAN under MacOS, required test data cannot be downloaded."); fsbrain::download_optional_data(); subjects_dir = fsbrain::get_optional_data_filepath("subjects_dir"); skip_if_not(dir.exists(subjects_dir), message="Test data missing."); subjects_list = c('subject1', 'subject2'); df = group.agg.atlas.native(subjects_dir, subjects_list, 'thickness', 'both', 'aparc'); qc_res = qc.from.regionwise.df(df); testthat::expect_true(is.data.frame(df)); testthat::expect_true(is.list(qc_res)); }) test_that("QC: outlier checks can be computed based on an atlas for both hemis.", { testthat::skip_on_cran(); # CRAN maintainers asked me to reduce test time on CRAN by disabling unit tests. skip_if(tests_running_on_cran_under_macos(), message = "Skipping on CRAN under MacOS, required test data cannot be downloaded."); fsbrain::download_optional_data(); subjects_dir = fsbrain::get_optional_data_filepath("subjects_dir"); skip_if_not(dir.exists(subjects_dir), message="Test data missing."); subjects_list = c('subject1', 'subject2'); qc_res_hl = qc.for.group(subjects_dir, subjects_list, 'thickness', 'aparc'); testthat::expect_true(is.list(qc_res_hl)); })