R Under development (unstable) (2024-02-01 r85851 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(freesurferformats) > > test_check("freesurferformats") [1] "Label table cdata (region names for the rows below):" [1] "unknown" "bankssts" [3] "caudalanteriorcingulate" "caudalmiddlefrontal" [5] "corpuscallosum" "cuneus" [7] "entorhinal" "fusiform" [9] "inferiorparietal" "inferiortemporal" [11] "isthmuscingulate" "lateraloccipital" [13] "lateralorbitofrontal" "lingual" [15] "medialorbitofrontal" "middletemporal" [17] "parahippocampal" "paracentral" [19] "parsopercularis" "parsorbitalis" [21] "parstriangularis" "pericalcarine" [23] "postcentral" "posteriorcingulate" [25] "precentral" "precuneus" [27] "rostralanteriorcingulate" "rostralmiddlefrontal" [29] "superiorfrontal" "superiorparietal" [31] "superiortemporal" "supramarginal" [33] "frontalpole" "temporalpole" [35] "transversetemporal" "insula" [1] "Label table attribute columns:" Red Green Blue Alpha Key Index unknown 25 5 25 0 1639705 1639705 bankssts 25 100 40 0 2647065 2647065 caudalanteriorcingulate 125 100 160 0 10511485 10511485 caudalmiddlefrontal 100 25 0 0 6500 6500 corpuscallosum 120 70 50 0 3294840 3294840 cuneus 220 20 100 0 6558940 6558940 entorhinal 220 20 10 0 660700 660700 fusiform 180 220 140 0 9231540 9231540 inferiorparietal 220 60 220 0 14433500 14433500 inferiortemporal 180 40 120 0 7874740 7874740 isthmuscingulate 140 20 140 0 9180300 9180300 lateraloccipital 20 30 140 0 9182740 9182740 lateralorbitofrontal 35 75 50 0 3296035 3296035 lingual 225 140 140 0 9211105 9211105 medialorbitofrontal 200 35 75 0 4924360 4924360 middletemporal 160 100 50 0 3302560 3302560 parahippocampal 20 220 60 0 3988500 3988500 paracentral 60 220 60 0 3988540 3988540 parsopercularis 220 180 140 0 9221340 9221340 parsorbitalis 20 100 50 0 3302420 3302420 parstriangularis 220 60 20 0 1326300 1326300 pericalcarine 120 100 60 0 3957880 3957880 postcentral 220 20 20 0 1316060 1316060 posteriorcingulate 220 180 220 0 14464220 14464220 precentral 60 20 220 0 14423100 14423100 precuneus 160 140 180 0 11832480 11832480 rostralanteriorcingulate 80 20 140 0 9180240 9180240 rostralmiddlefrontal 75 50 125 0 8204875 8204875 superiorfrontal 20 220 160 0 10542100 10542100 superiorparietal 20 180 140 0 9221140 9221140 superiortemporal 140 220 220 0 14474380 14474380 supramarginal 80 160 20 0 1351760 1351760 frontalpole 100 0 100 0 6553700 6553700 temporalpole 70 20 170 0 11146310 11146310 transversetemporal 150 150 200 0 13145750 13145750 insula 255 192 32 0 2146559 2146559 [ FAIL 0 | WARN 0 | SKIP 21 | PASS 727 ] ══ Skipped tests (21) ══════════════════════════════════════════════════════════ • Freesurfer installation with GCA file available. (1): 'test-read_fs_annot.R:175:3' • On CRAN (18): 'test-cifti.R:7:3', 'test-gifti_xml_tools.R:4:3', 'test-read_fs_annot.R:78:3', 'test-read_fs_patch.R:6:3', 'test-read_fs_patch.R:28:3', 'test-read_fs_surface.R:4:3', 'test-read_fs_surface.R:36:3', 'test-read_fs_surface.R:60:3', 'test-read_nifti1.R:2:3', 'test-read_nifti1.R:21:3', 'test-read_nifti1.R:39:3', 'test-read_nifti1.R:57:3', 'test-read_nifti1.R:77:3', 'test-read_nifti2.R:4:3', 'test-read_nifti2.R:28:3', 'test-read_nifti2.R:44:3', 'test-surface_dist.R:4:3', 'test-write_fs_surface.R:41:3' • Test data missing. (2): 'test-mgh2nii.R:8:33', 'test-read_fs_surface.R:89:3' [ FAIL 0 | WARN 0 | SKIP 21 | PASS 727 ] > > proc.time() user system elapsed 20.85 2.51 23.37