* using log directory ‘/srv/hornik/tmp/CRAN_pretest/frailtypack.Rcheck’
* using R Under development (unstable) (2025-10-28 r88973)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
Debian clang version 19.1.7 (7)
Debian flang-new version 19.1.7 (7)
* running under: Debian GNU/Linux forky/sid
* using session charset: UTF-8
* checking for file ‘frailtypack/DESCRIPTION’ ... OK
* this is package ‘frailtypack’ version ‘3.8.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/8s] OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘frailtypack’ can be installed ... [196s/128s] OK
* used C compiler: ‘Debian clang version 19.1.7 (7)’
* used Fortran compiler: ‘Debian flang-new version 19.1.7 (7)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [79s/79s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [13s/13s] OK
* checking for unstated dependencies in ‘demo’ ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [1s/1s] OK
* checking PDF version of manual ... [11s/11s] OK
* checking HTML version of manual ... [6s/5s] NOTE
Found the following HTML validation problems:
GenfrailtyPenal.html:39:4 (GenfrailtyPenal.Rd:338): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:49:4 (GenfrailtyPenal.Rd:348): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:76:4 (GenfrailtyPenal.Rd:375): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:84:4 (GenfrailtyPenal.Rd:383): Warning:
attribute "width" has invalid value "731px"
GenfrailtyPenal.html:90:4 (GenfrailtyPenal.Rd:390): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:117:4 (GenfrailtyPenal.Rd:417): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:156:4 (GenfrailtyPenal.Rd:458): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:193:4 (GenfrailtyPenal.Rd:496): Warning:
attribute "width" has invalid value "512px"
GenfrailtyPenal.html:204:4 (GenfrailtyPenal.Rd:507): Warning:
attribute "width" has invalid value "512px"
additivePenal.html:40:4 (additivePenal.Rd:166): Warning:
attribute "width" has invalid value "439px"
frailtyCmprsk.html:28:4 (frailtyCmprsk.Rd:138): Warning:
attribute "width" has invalid value "329px"
frailtyIllnessDeath.html:31:4 (frailtyIllnessDeath.Rd:171): Warning:
attribute "width" has invalid value "329px"
jointSurroCopPenal.html:42:4 (jointSurroCopPenal.Rd:260): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:46:4 (jointSurroCopPenal.Rd:264): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:50:4 (jointSurroCopPenal.Rd:268): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:60:4 (jointSurroCopPenal.Rd:278): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:80:4 (jointSurroCopPenal.Rd:299): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:84:4 (jointSurroCopPenal.Rd:303): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:97:4 (jointSurroCopPenal.Rd:317): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:113:4 (jointSurroCopPenal.Rd:334): Warning:
attribute "width" has invalid value "731px"
jointSurroCopPenal.html:470:1 (jointSurroCopPenal.Rd:201): Warning:
attribute "width" has invalid value "365px"
jointSurroPenal.html:36:4 (jointSurroPenal.Rd:320): Warning:
attribute "width" has invalid value "731px"
jointSurroPenal.html:47:4 (jointSurroPenal.Rd:331): Warning:
attribute "width" has invalid value "731px"
jointSurroPenal.html:63:4 (jointSurroPenal.Rd:347): Warning:
attribute "width" has invalid value "731px"
jointSurroPenal.html:82:4 (jointSurroPenal.Rd:366): Warning:
attribute "width" has invalid value "731px"
jointSurroPenal.html:101:4 (jointSurroPenal.Rd:386): Warning:
attribute "width" has invalid value "731px"
jointSurroPenal.html:115:4 (jointSurroPenal.Rd:401): Warning:
attribute "width" has invalid value "365px"
jointSurroPenal.html:552:1 (jointSurroPenal.Rd:256): Warning:
attribute "width" has invalid value "365px"
longiPenal.html:35:4 (longiPenal.Rd:313): Warning:
attribute "width" has invalid value "731px"
multivPenal.html:39:4 (multivPenal.Rd:229): Warning:
attribute "width" has invalid value "731px"
multivPenal.html:55:4 (multivPenal.Rd:245): Warning:
attribute "width" has invalid value "731px"
prediction.html:32:4 (prediction.Rd:107): Warning:
attribute "width" has invalid value "731px"
prediction.html:41:4 (prediction.Rd:116): Warning:
attribute "width" has invalid value "731px"
prediction.html:46:4 (prediction.Rd:121): Warning:
attribute "width" has invalid value "731px"
prediction.html:57:4 (prediction.Rd:132): Warning:
attribute "width" has invalid value "731px"
prediction.html:62:4 (prediction.Rd:137): Warning:
attribute "width" has invalid value "731px"
prediction.html:71:4 (prediction.Rd:146): Warning:
attribute "width" has invalid value "731px"
prediction.html:86:4 (prediction.Rd:161): Warning:
attribute "width" has invalid value "731px"
prediction.html:117:4 (prediction.Rd:192): Warning:
attribute "width" has invalid value "731px"
prediction.html:122:4 (prediction.Rd:197): Warning:
attribute "width" has invalid value "731px"
prediction.html:128:4 (prediction.Rd:203): Warning:
attribute "width" has invalid value "731px"
prediction.html:140:4 (prediction.Rd:215): Warning:
attribute "width" has invalid value "731px"
prediction.html:141:1 (prediction.Rd:216): Warning:
attribute "width" has invalid value "731px"
prediction.html:166:13 (prediction.Rd:241): Warning:
attribute "width" has invalid value "731px"
prediction.html:174:4 (prediction.Rd:249): Warning:
attribute "width" has invalid value "731px"
prediction.html:175:1 (prediction.Rd:250): Warning:
attribute "width" has invalid value "731px"
prediction.html:185:4 (prediction.Rd:260): Warning:
attribute "width" has invalid value "731px"
prediction.html:202:4 (prediction.Rd:277): Warning:
attribute "width" has invalid value "731px"
ste.html:85:4 (ste.Rd:61): Warning:
attribute "width" has invalid value "439px"
ste.html:87:10 (ste.Rd:63): Warning:
attribute "width" has invalid value "22px"
trivPenal.html:35:4 (trivPenal.Rd:290): Warning:
attribute "width" has invalid value "731px"
trivPenal.html:56:4 (trivPenal.Rd:311): Warning:
attribute "width" has invalid value "731px"
trivPenalNL.html:35:4 (trivPenalNL.Rd:301): Warning:
attribute "width" has invalid value "731px"
trivPenalNL.html:59:4 (trivPenalNL.Rd:325): Warning:
attribute "width" has invalid value "731px"
trivPenalNL.html:75:4 (trivPenalNL.Rd:341): Warning:
attribute "width" has invalid value "731px"
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE