R Under development (unstable) (2025-02-12 r87715 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(fluxible) > > test_check("fluxible") Averaging air temperature for each flux... Calculating fluxes... R constant set to 0.082057 Concentration was measured in ppm Fluxes are in mmol/m2/h Averaging air temperature for each flux... Creating a df with the columns from 'cols_ave' argument... Calculating fluxes... R constant set to 0.082057 Concentration was measured in ppm Fluxes are in mmol/m2/h Column datetime of data frame slopes0 has to be numeric Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Total number of measurements: 6 ok 6 100 % discard 0 0 % zero 0 0 % force_discard 0 0 % start_error 0 0 % no_data 0 0 % force_ok 0 0 % Cutting data according to 'keep_arg'... Averaging air temperature for each flux... Calculating fluxes... R constant set to 0.082057 Concentration was measured in ppm Fluxes are in mmol/m2/h Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Total number of measurements: 12 ok 11 92 % force_discard 1 8 % discard 0 0 % zero 0 0 % start_error 0 0 % no_data 0 0 % force_ok 0 0 % Total number of measurements: 12 ok 9 75 % zero 3 25 % discard 0 0 % force_discard 0 0 % start_error 0 0 % no_data 0 0 % force_ok 0 0 % Cutting data according to 'keep_arg'... Averaging air temperature for each flux... Creating a df with the columns from 'cols_keep' argument... Calculating fluxes... R constant set to 0.082057 Concentration was measured in ppm Fluxes are in mmol/m2/h Cutting data according to 'keep_arg'... Averaging air temperature for each flux... Calculating fluxes... R constant set to 0.082057 Concentration was measured in ppb Fluxes are in micromol/m2/h Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Cutting measurements... Estimating starting parameters for optimization... Optimizing fitting parameters... Calculating fits and slopes... Done. Argument start_cut has to be numeric Argument start_cut has to be numeric Column flux of data frame fluxes has to be numeric Column datetime of data frame co2_df_short has to be POSIXct Column conc of data frame co2_df_short has to be numeric Column start of data frame record_short has to be POSIXct Argument startcrop has to be numeric Argument measurement_length has to be numeric Argument time_diff has to be numeric Plotting in progress [ FAIL 0 | WARN 0 | SKIP 39 | PASS 34 ] ══ Skipped tests (39) ══════════════════════════════════════════════════════════ • On CRAN (39): 'test-flux_calc.R:41:3', 'test-flux_calc.R:45:3', 'test-flux_calc.R:63:3', 'test-flux_calc.R:82:3', 'test-flux_calc.R:100:3', 'test-flux_calc.R:216:3', 'test-flux_calc.R:236:3', 'test-flux_calc.R:288:3', 'test-flux_calc.R:385:3', 'test-flux_fitting.R:2:3', 'test-flux_fitting.R:15:3', 'test-flux_fitting.R:28:3', 'test-flux_fitting.R:41:3', 'test-flux_fitting.R:55:3', 'test-flux_fitting.R:77:3', 'test-flux_fitting_exp.R:2:3', 'test-flux_fitting_exp.R:13:3', 'test-flux_fitting_exp.R:25:3', 'test-flux_fitting_exp.R:121:3', 'test-flux_fitting_lin.R:135:3', 'test-flux_fitting_quadratic.R:2:3', 'test-flux_flag_count.R:2:3', 'test-flux_gep.R:2:3', 'test-flux_gep.R:14:3', 'test-flux_gep.R:50:3', 'test-flux_gep.R:87:3', 'test-flux_gep.R:137:3', 'test-flux_gep.R:159:3', 'test-flux_match.R:2:3', 'test-flux_match.R:24:3', 'test-flux_match.R:50:3', 'test-flux_match.R:66:3', 'test-flux_plot.R:2:3', 'test-flux_plot.R:18:3', 'test-flux_plot.R:27:3', 'test-flux_plot.R:45:3', 'test-flux_quality.R:2:3', 'test-flux_quality.R:13:3', 'test-flux_quality.R:24:3' [ FAIL 0 | WARN 0 | SKIP 39 | PASS 34 ] > > proc.time() user system elapsed 33.70 1.12 37.96