gamma <- seq(1, 1.2, length.out=9) names(gamma) <- 0:8 test_that("mean_survsplinek",{ expect_equal(mean_survspline0(gamma["0"], gamma["1"]), mean_survspline(gamma[1:2])) expect_equal(mean_survspline1(gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,0)), mean_survspline(gamma[1:3], knots = c(-10,0,0))) expect_equal(mean_survspline2(gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,0,0)), mean_survspline(gamma[1:4], knots=c(-10,0,0,0))) expect_equal(mean_survspline3(gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,0,0,0)), mean_survspline(gamma[1:5], knots=c(-10,0,0,0,0))) expect_equal(mean_survspline4(gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,0,0,0,0)), mean_survspline(gamma[1:6], knots=c(-10,0,0,0,0,0))) expect_equal(mean_survspline5(gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,0,0,0,0,0)), mean_survspline(gamma[1:7], knots=c(-10,0,0,0,0,0,0))) expect_equal(mean_survspline6(gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,0,0,0,0,0,0)), mean_survspline(gamma[1:8], knots=c(-10,0,0,0,0,0,0,0))) expect_equal(mean_survspline7(gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,0,0,0,0,0,0,0)), mean_survspline(gamma[1:9], knots=c(-10,0,0,0,0,0,0,0,0))) }) test_that("rmst_survsplinek",{ t <- 1 expect_equal(rmst_survspline0(t=t, gamma["0"], gamma["1"]), rmst_survspline(t=t, gamma[1:2])) expect_equal(rmst_survspline1(t=t, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), rmst_survspline(t=t, gamma[1:3], knots = c(-10,0,10))) expect_equal(rmst_survspline2(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), rmst_survspline(t=t, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(rmst_survspline3(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), rmst_survspline(t=t, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(rmst_survspline4(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), rmst_survspline(t=t, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(rmst_survspline5(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), rmst_survspline(t=t, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(rmst_survspline6(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), rmst_survspline(t=t, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(rmst_survspline7(t=t, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), rmst_survspline(t=t, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) }) test_that("dsurvsplinek",{ x <- 1 expect_equal(dsurvspline0(x=x, gamma["0"], gamma["1"], knots=c(-10,10)), dsurvspline(x=x, gamma[1:2], knots=c(-10,10))) expect_equal(dsurvspline1(x=x, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), dsurvspline(x=x, gamma[1:3], knots = c(-10,0,10))) expect_equal(dsurvspline2(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), dsurvspline(x=x, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(dsurvspline3(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), dsurvspline(x=x, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(dsurvspline4(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), dsurvspline(x=x, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(dsurvspline5(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), dsurvspline(x=x, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(dsurvspline6(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), dsurvspline(x=x, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(dsurvspline7(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), dsurvspline(x=x, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) }) test_that("psurvsplinek",{ x <- 1 expect_equal(psurvspline0(q=x, gamma["0"], gamma["1"], knots=c(-10,10)), psurvspline(q=x, gamma[1:2], knots=c(-10,10))) expect_equal(psurvspline1(q=x, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), psurvspline(q=x, gamma[1:3], knots = c(-10,0,10))) expect_equal(psurvspline2(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), psurvspline(q=x, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(psurvspline3(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), psurvspline(q=x, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(psurvspline4(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), psurvspline(q=x, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(psurvspline5(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), psurvspline(q=x, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(psurvspline6(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), psurvspline(q=x, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(psurvspline7(q=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), psurvspline(q=x, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) }) if (covr::in_covr()){ # these are slow test_that("qsurvsplinek",{ p <- 0.4 expect_equal(qsurvspline0(p=p, gamma["0"], gamma["1"], knots=c(-10,10)), qsurvspline(p=p, gamma[1:2], knots=c(-10,10))) expect_equal(qsurvspline1(p=p, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), qsurvspline(p=p, gamma[1:3], knots = c(-10,0,10))) expect_equal(qsurvspline2(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), qsurvspline(p=p, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(qsurvspline3(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), qsurvspline(p=p, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(qsurvspline4(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), qsurvspline(p=p, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(qsurvspline5(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), qsurvspline(p=p, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(qsurvspline6(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), qsurvspline(p=p, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(qsurvspline7(p=p, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), qsurvspline(p=p, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) }) test_that("rsurvsplinek",{ expect_equal({set.seed(1); rsurvspline0(n=1, gamma["0"], gamma["1"], knots=c(-10,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:2], knots=c(-10,10))}) expect_equal({set.seed(1); rsurvspline1(n=1, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:3], knots = c(-10,0,10))}) expect_equal({set.seed(1); rsurvspline2(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:4], knots=c(-10,0,1,10))}) expect_equal({set.seed(1); rsurvspline3(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:5], knots=c(-10,0,1,2,10))}) expect_equal({set.seed(1); rsurvspline4(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:6], knots=c(-10,0,1,2,3,10))}) expect_equal({set.seed(1); rsurvspline5(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:7], knots=c(-10,0,1,2,3,4,10))}) expect_equal({set.seed(1); rsurvspline6(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))}) expect_equal({set.seed(1); rsurvspline7(n=1, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10))}, {set.seed(1); rsurvspline(n=1, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))}) }) } test_that("hsurvsplinek",{ x <- 1 expect_equal(hsurvspline0(x=x, gamma["0"], gamma["1"], knots=c(-10,10)), hsurvspline(x=x, gamma[1:2], knots=c(-10,10))) expect_equal(hsurvspline1(x=x, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), hsurvspline(x=x, gamma[1:3], knots = c(-10,0,10))) expect_equal(hsurvspline2(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), hsurvspline(x=x, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(hsurvspline3(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), hsurvspline(x=x, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(hsurvspline4(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), hsurvspline(x=x, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(hsurvspline5(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), hsurvspline(x=x, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(hsurvspline6(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), hsurvspline(x=x, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(hsurvspline7(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), hsurvspline(x=x, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) }) test_that("Hsurvsplinek",{ x <- 1 expect_equal(Hsurvspline0(x=x, gamma["0"], gamma["1"], knots=c(-10,10)), Hsurvspline(x=x, gamma[1:2], knots=c(-10,10))) expect_equal(Hsurvspline1(x=x, gamma["0"], gamma["1"], gamma["2"], knots = c(-10,0,10)), Hsurvspline(x=x, gamma[1:3], knots = c(-10,0,10))) expect_equal(Hsurvspline2(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], knots=c(-10,0,1,10)), Hsurvspline(x=x, gamma[1:4], knots=c(-10,0,1,10))) expect_equal(Hsurvspline3(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], knots=c(-10,0,1,2,10)), Hsurvspline(x=x, gamma[1:5], knots=c(-10,0,1,2,10))) expect_equal(Hsurvspline4(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], knots=c(-10,0,1,2,3,10)), Hsurvspline(x=x, gamma[1:6], knots=c(-10,0,1,2,3,10))) expect_equal(Hsurvspline5(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], knots=c(-10,0,1,2,3,4,10)), Hsurvspline(x=x, gamma[1:7], knots=c(-10,0,1,2,3,4,10))) expect_equal(Hsurvspline6(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], knots=c(-10,0,1,2,3,4,5,10)), Hsurvspline(x=x, gamma[1:8], knots=c(-10,0,1,2,3,4,5,10))) expect_equal(Hsurvspline7(x=x, gamma["0"], gamma["1"], gamma["2"], gamma["3"], gamma["4"], gamma["5"], gamma["6"], gamma["7"], gamma["8"], knots=c(-10,0,1,2,3,4,5,6,10)), Hsurvspline(x=x, gamma[1:9], knots=c(-10,0,1,2,3,4,5,6,10))) })