test_that("check tidy", { fitw <- flexsurvreg(Surv(futime, fustat) ~ age, data = ovarian, dist = "weibull") expect_equal( tidy(fitw, transform = 'baseline.real')$estimate, coef(fitw) ) }) test_that("check tidy against survreg", { fit_fs <- flexsurvreg(Surv(futime, fustat) ~ ecog.ps, data = ovarian, dist = "weibull") fit_sr <- survreg(Surv(futime, fustat) ~ ecog.ps, data = ovarian, dist = "weibull") expect_equal( object = as.data.frame(tidy(fit_fs)[3, ]), expected = as.data.frame(broom::tidy(fit_sr)[2, ]), tolerance = 1e-6 ) }) test_that("check glance", { fitw <- flexsurvreg(Surv(futime, fustat) ~ age, data = ovarian, dist = "weibull") gl <- glance(fitw) expect_equal(gl$N, fitw$N) expect_equal(gl$events, fitw$events) expect_equal(gl$trisk, fitw$trisk) expect_equal(gl$df, fitw$npars) expect_equal(gl$logLik, fitw$loglik) expect_equal(gl$AIC, fitw$AIC) expect_equal(gl$BIC, BIC(fitw)) }) test_that("check augment", { fitw <- flexsurvreg(Surv(futime, fustat) ~ age, data = ovarian, dist = "weibull") expect_equal(augment(fitw)$.pred_time, predict(fitw)$.pred_time) expect_equal(augment(fitw)$.resid, residuals(fitw)) })