* installing *source* package ‘fishmethods’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 15.0.6’
clang++-15  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init_dummy_file.cpp -o init_dummy_file.o
(cd TMB; /home/hornik/tmp/R/bin/Rscript \
--no-save --no-restore compile.R '')
Note: Using Makevars in /home/hornik/.R/Makevars-clang 
using C++ compiler: ‘Debian clang version 15.0.6’
make[1]: Entering directory '/srv/hornik/tmp/CRAN/fishmethods.Rcheck/00_pkg_src/fishmethods/src/TMB'
clang++-15  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include"   -DTMB_EIGEN_DISABLE_WARNINGS   -DTMB_LIB_INIT=R_init_fishmethods_TMBExports  -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c fishmethods_TMBExports.cpp -o fishmethods_TMBExports.o
In file included from fishmethods_TMBExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/TMB.hpp:87:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from fishmethods_TMBExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/TMB.hpp:87:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from fishmethods_TMBExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/TMB.hpp:112:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/cppad/cppad.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable]
        int sign;
            ^
In file included from fishmethods_TMBExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/TMB.hpp:112:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/cppad/cppad.hpp:39:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable]
                size_t pow2 = 1;
                       ^
5 warnings generated.
clang++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fishmethods_TMBExports.so fishmethods_TMBExports.o -L/home/hornik/tmp/R/lib -lR
make[1]: Leaving directory '/srv/hornik/tmp/CRAN/fishmethods.Rcheck/00_pkg_src/fishmethods/src/TMB'
make[1]: Entering directory '/srv/hornik/tmp/CRAN/fishmethods.Rcheck/00_pkg_src/fishmethods/src/TMB'
make[1]: Leaving directory '/srv/hornik/tmp/CRAN/fishmethods.Rcheck/00_pkg_src/fishmethods/src/TMB'
[1] TRUE
clang++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fishmethods.so init_dummy_file.o -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/fishmethods.Rcheck/00LOCK-fishmethods/00new/fishmethods/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fishmethods)