* using log directory 'd:/RCompile/CRANincoming/R-devel/findGSEX.Rcheck' * using R Under development (unstable) (2024-05-14 r86553 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'findGSEX/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'findGSEX' version '1.2.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Laiyi Fu ' New submission Possibly misspelled words in DESCRIPTION: findGSEX (8:36) mer (3:58) polyploid (3:32) The Title field should be in title case. Current version is: 'Estimate genome size of polyploid species using k-mer frequencies' In title case that is: 'Estimate Genome Size of Polyploid Species using k-Mer Frequencies' * checking package namespace information ... NOTE Namespaces with empty importFrom: 'dplyr' 'fGarch' 'ggplot2' 'png' 'scales' * checking package dependencies ... NOTE Depends: includes the non-default packages: 'RColorBrewer', 'ggplot2', 'pracma', 'fGarch', 'scales', 'png', 'dplyr' Adding so many packages to the search path is excessive and importing selectively is preferable. * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'findGSEX' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... NONE * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... OK * DONE Status: 3 NOTEs