* using log directory ‘/srv/hornik/tmp/CRAN_pretest/fdars.Rcheck’ * using R Under development (unstable) (2026-01-09 r89293) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 21.1.8 (1) Debian flang version 21.1.8 (1) * running under: Debian GNU/Linux forky/sid * using session charset: UTF-8 * checking for file ‘fdars/DESCRIPTION’ ... OK * this is package ‘fdars’ version ‘0.2.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘Simon Müller ’ New submission Size of tarball: 40391138 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... NOTE Found the following hidden files and directories: src/rust/vendor/aho-corasick-1.1.4/.cargo-checksum.json src/rust/vendor/anes-0.1.6/.cargo-checksum.json src/rust/vendor/anstyle-1.0.13/.cargo-checksum.json src/rust/vendor/approx-0.5.1/.cargo-checksum.json src/rust/vendor/autocfg-1.5.0/.cargo-checksum.json src/rust/vendor/bumpalo-3.19.1/.cargo-checksum.json src/rust/vendor/bytemuck-1.24.0/.cargo-checksum.json src/rust/vendor/cast-0.3.0/.cargo-checksum.json src/rust/vendor/cfg-if-1.0.4/.cargo-checksum.json src/rust/vendor/ciborium-0.2.2/.cargo-checksum.json src/rust/vendor/ciborium-io-0.2.2/.cargo-checksum.json src/rust/vendor/ciborium-ll-0.2.2/.cargo-checksum.json src/rust/vendor/clap-4.5.54/.cargo-checksum.json src/rust/vendor/clap_builder-4.5.54/.cargo-checksum.json src/rust/vendor/clap_lex-0.7.6/.cargo-checksum.json src/rust/vendor/criterion-0.5.1/.cargo-checksum.json src/rust/vendor/criterion-plot-0.5.0/.cargo-checksum.json src/rust/vendor/crossbeam-deque-0.8.6/.cargo-checksum.json src/rust/vendor/crossbeam-epoch-0.9.18/.cargo-checksum.json src/rust/vendor/crossbeam-utils-0.8.21/.cargo-checksum.json src/rust/vendor/crunchy-0.2.4/.cargo-checksum.json src/rust/vendor/either-1.15.0/.cargo-checksum.json src/rust/vendor/extendr-api-0.8.1/.cargo-checksum.json src/rust/vendor/extendr-ffi-0.8.1/.cargo-checksum.json src/rust/vendor/extendr-macros-0.8.1/.cargo-checksum.json src/rust/vendor/getrandom-0.2.16/.cargo-checksum.json src/rust/vendor/half-2.7.1/.cargo-checksum.json src/rust/vendor/hermit-abi-0.5.2/.cargo-checksum.json src/rust/vendor/is-terminal-0.4.17/.cargo-checksum.json src/rust/vendor/itertools-0.10.5/.cargo-checksum.json src/rust/vendor/itoa-1.0.17/.cargo-checksum.json src/rust/vendor/js-sys-0.3.83/.cargo-checksum.json src/rust/vendor/libc-0.2.180/.cargo-checksum.json src/rust/vendor/libm-0.2.15/.cargo-checksum.json src/rust/vendor/matrixmultiply-0.3.10/.cargo-checksum.json src/rust/vendor/memchr-2.7.6/.cargo-checksum.json src/rust/vendor/nalgebra-0.33.2/.cargo-checksum.json src/rust/vendor/nalgebra-macros-0.2.2/.cargo-checksum.json src/rust/vendor/num-bigint-0.4.6/.cargo-checksum.json src/rust/vendor/num-complex-0.4.6/.cargo-checksum.json src/rust/vendor/num-integer-0.1.46/.cargo-checksum.json src/rust/vendor/num-rational-0.4.2/.cargo-checksum.json src/rust/vendor/num-traits-0.2.19/.cargo-checksum.json src/rust/vendor/once_cell-1.21.3/.cargo-checksum.json src/rust/vendor/oorandom-11.1.5/.cargo-checksum.json src/rust/vendor/paste-1.0.15/.cargo-checksum.json src/rust/vendor/plotters-0.3.7/.cargo-checksum.json src/rust/vendor/plotters-backend-0.3.7/.cargo-checksum.json src/rust/vendor/plotters-svg-0.3.7/.cargo-checksum.json src/rust/vendor/ppv-lite86-0.2.21/.cargo-checksum.json src/rust/vendor/primal-check-0.3.4/.cargo-checksum.json src/rust/vendor/proc-macro2-1.0.105/.cargo-checksum.json src/rust/vendor/quote-1.0.43/.cargo-checksum.json src/rust/vendor/rand-0.8.5/.cargo-checksum.json src/rust/vendor/rand_chacha-0.3.1/.cargo-checksum.json src/rust/vendor/rand_core-0.6.4/.cargo-checksum.json src/rust/vendor/rand_distr-0.4.3/.cargo-checksum.json src/rust/vendor/rawpointer-0.2.1/.cargo-checksum.json src/rust/vendor/rayon-1.11.0/.cargo-checksum.json src/rust/vendor/rayon-core-1.13.0/.cargo-checksum.json src/rust/vendor/regex-1.12.2/.cargo-checksum.json src/rust/vendor/regex-automata-0.4.13/.cargo-checksum.json src/rust/vendor/regex-syntax-0.8.8/.cargo-checksum.json src/rust/vendor/rustfft-6.4.1/.cargo-checksum.json src/rust/vendor/rustversion-1.0.22/.cargo-checksum.json src/rust/vendor/safe_arch-0.7.4/.cargo-checksum.json src/rust/vendor/same-file-1.0.6/.cargo-checksum.json src/rust/vendor/serde-1.0.228/.cargo-checksum.json src/rust/vendor/serde_core-1.0.228/.cargo-checksum.json src/rust/vendor/serde_derive-1.0.228/.cargo-checksum.json src/rust/vendor/serde_json-1.0.149/.cargo-checksum.json src/rust/vendor/simba-0.9.1/.cargo-checksum.json src/rust/vendor/strength_reduce-0.2.4/.cargo-checksum.json src/rust/vendor/syn-2.0.114/.cargo-checksum.json src/rust/vendor/tinytemplate-1.2.1/.cargo-checksum.json src/rust/vendor/transpose-0.2.3/.cargo-checksum.json src/rust/vendor/typenum-1.19.0/.cargo-checksum.json src/rust/vendor/unicode-ident-1.0.22/.cargo-checksum.json src/rust/vendor/walkdir-2.5.0/.cargo-checksum.json src/rust/vendor/wasi-0.11.1+wasi-snapshot-preview1/.cargo-checksum.json src/rust/vendor/wasm-bindgen-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-macro-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-macro-support-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-shared-0.2.106/.cargo-checksum.json src/rust/vendor/web-sys-0.3.83/.cargo-checksum.json src/rust/vendor/wide-0.7.33/.cargo-checksum.json src/rust/vendor/winapi-util-0.1.11/.cargo-checksum.json src/rust/vendor/windows-link-0.2.1/.cargo-checksum.json src/rust/vendor/windows-sys-0.61.2/.cargo-checksum.json src/rust/vendor/zerocopy-0.8.33/.cargo-checksum.json src/rust/vendor/zerocopy-derive-0.8.33/.cargo-checksum.json src/rust/vendor/zmij-1.0.12/.cargo-checksum.json These were most likely included in error. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. CRAN-pack does not know about src/rust/vendor/aho-corasick-1.1.4/.cargo-checksum.json src/rust/vendor/anes-0.1.6/.cargo-checksum.json src/rust/vendor/anstyle-1.0.13/.cargo-checksum.json src/rust/vendor/approx-0.5.1/.cargo-checksum.json src/rust/vendor/autocfg-1.5.0/.cargo-checksum.json src/rust/vendor/bumpalo-3.19.1/.cargo-checksum.json src/rust/vendor/bytemuck-1.24.0/.cargo-checksum.json src/rust/vendor/cast-0.3.0/.cargo-checksum.json src/rust/vendor/cfg-if-1.0.4/.cargo-checksum.json src/rust/vendor/ciborium-0.2.2/.cargo-checksum.json src/rust/vendor/ciborium-io-0.2.2/.cargo-checksum.json src/rust/vendor/ciborium-ll-0.2.2/.cargo-checksum.json src/rust/vendor/clap-4.5.54/.cargo-checksum.json src/rust/vendor/clap_builder-4.5.54/.cargo-checksum.json src/rust/vendor/clap_lex-0.7.6/.cargo-checksum.json src/rust/vendor/criterion-0.5.1/.cargo-checksum.json src/rust/vendor/criterion-plot-0.5.0/.cargo-checksum.json src/rust/vendor/crossbeam-deque-0.8.6/.cargo-checksum.json src/rust/vendor/crossbeam-epoch-0.9.18/.cargo-checksum.json src/rust/vendor/crossbeam-utils-0.8.21/.cargo-checksum.json src/rust/vendor/crunchy-0.2.4/.cargo-checksum.json src/rust/vendor/either-1.15.0/.cargo-checksum.json src/rust/vendor/extendr-api-0.8.1/.cargo-checksum.json src/rust/vendor/extendr-ffi-0.8.1/.cargo-checksum.json src/rust/vendor/extendr-macros-0.8.1/.cargo-checksum.json src/rust/vendor/getrandom-0.2.16/.cargo-checksum.json src/rust/vendor/half-2.7.1/.cargo-checksum.json src/rust/vendor/hermit-abi-0.5.2/.cargo-checksum.json src/rust/vendor/is-terminal-0.4.17/.cargo-checksum.json src/rust/vendor/itertools-0.10.5/.cargo-checksum.json src/rust/vendor/itoa-1.0.17/.cargo-checksum.json src/rust/vendor/js-sys-0.3.83/.cargo-checksum.json src/rust/vendor/libc-0.2.180/.cargo-checksum.json src/rust/vendor/libm-0.2.15/.cargo-checksum.json src/rust/vendor/matrixmultiply-0.3.10/.cargo-checksum.json src/rust/vendor/memchr-2.7.6/.cargo-checksum.json src/rust/vendor/nalgebra-0.33.2/.cargo-checksum.json src/rust/vendor/nalgebra-macros-0.2.2/.cargo-checksum.json src/rust/vendor/num-bigint-0.4.6/.cargo-checksum.json src/rust/vendor/num-complex-0.4.6/.cargo-checksum.json src/rust/vendor/num-integer-0.1.46/.cargo-checksum.json src/rust/vendor/num-rational-0.4.2/.cargo-checksum.json src/rust/vendor/num-traits-0.2.19/.cargo-checksum.json src/rust/vendor/once_cell-1.21.3/.cargo-checksum.json src/rust/vendor/oorandom-11.1.5/.cargo-checksum.json src/rust/vendor/paste-1.0.15/.cargo-checksum.json src/rust/vendor/plotters-0.3.7/.cargo-checksum.json src/rust/vendor/plotters-backend-0.3.7/.cargo-checksum.json src/rust/vendor/plotters-svg-0.3.7/.cargo-checksum.json src/rust/vendor/ppv-lite86-0.2.21/.cargo-checksum.json src/rust/vendor/primal-check-0.3.4/.cargo-checksum.json src/rust/vendor/proc-macro2-1.0.105/.cargo-checksum.json src/rust/vendor/quote-1.0.43/.cargo-checksum.json src/rust/vendor/rand-0.8.5/.cargo-checksum.json src/rust/vendor/rand_chacha-0.3.1/.cargo-checksum.json src/rust/vendor/rand_core-0.6.4/.cargo-checksum.json src/rust/vendor/rand_distr-0.4.3/.cargo-checksum.json src/rust/vendor/rawpointer-0.2.1/.cargo-checksum.json src/rust/vendor/rayon-1.11.0/.cargo-checksum.json src/rust/vendor/rayon-core-1.13.0/.cargo-checksum.json src/rust/vendor/regex-1.12.2/.cargo-checksum.json src/rust/vendor/regex-automata-0.4.13/.cargo-checksum.json src/rust/vendor/regex-syntax-0.8.8/.cargo-checksum.json src/rust/vendor/rustfft-6.4.1/.cargo-checksum.json src/rust/vendor/rustversion-1.0.22/.cargo-checksum.json src/rust/vendor/safe_arch-0.7.4/.cargo-checksum.json src/rust/vendor/same-file-1.0.6/.cargo-checksum.json src/rust/vendor/serde-1.0.228/.cargo-checksum.json src/rust/vendor/serde_core-1.0.228/.cargo-checksum.json src/rust/vendor/serde_derive-1.0.228/.cargo-checksum.json src/rust/vendor/serde_json-1.0.149/.cargo-checksum.json src/rust/vendor/simba-0.9.1/.cargo-checksum.json src/rust/vendor/strength_reduce-0.2.4/.cargo-checksum.json src/rust/vendor/syn-2.0.114/.cargo-checksum.json src/rust/vendor/tinytemplate-1.2.1/.cargo-checksum.json src/rust/vendor/transpose-0.2.3/.cargo-checksum.json src/rust/vendor/typenum-1.19.0/.cargo-checksum.json src/rust/vendor/unicode-ident-1.0.22/.cargo-checksum.json src/rust/vendor/walkdir-2.5.0/.cargo-checksum.json src/rust/vendor/wasi-0.11.1+wasi-snapshot-preview1/.cargo-checksum.json src/rust/vendor/wasm-bindgen-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-macro-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-macro-support-0.2.106/.cargo-checksum.json src/rust/vendor/wasm-bindgen-shared-0.2.106/.cargo-checksum.json src/rust/vendor/web-sys-0.3.83/.cargo-checksum.json src/rust/vendor/wide-0.7.33/.cargo-checksum.json src/rust/vendor/winapi-util-0.1.11/.cargo-checksum.json src/rust/vendor/windows-link-0.2.1/.cargo-checksum.json src/rust/vendor/windows-sys-0.61.2/.cargo-checksum.json src/rust/vendor/zerocopy-0.8.33/.cargo-checksum.json src/rust/vendor/zerocopy-derive-0.8.33/.cargo-checksum.json src/rust/vendor/zmij-1.0.12/.cargo-checksum.json * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘fdars’ can be installed ... [207s/110s] OK * used C compiler: ‘Debian clang version 21.1.8 (1+b1)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [12s/12s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... WARNING File ‘fdars/libs/fdars.so’: Found ‘_exit’, possibly from ‘_exit’ (C) Object: ‘rust/target/release/libfdars.a’ Found ‘abort’, possibly from ‘abort’ (C) Object: ‘rust/target/release/libfdars.a’ Found ‘exit’, possibly from ‘exit’ (C) Object: ‘rust/target/release/libfdars.a’ Compiled code should not call entry points which might terminate R nor write to stdout/stderr instead of to the console, nor use Fortran I/O nor system RNGs nor [v]sprintf. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. * checking Rust compilation ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [23s/18s] NOTE Examples with CPU time > 2.5 times elapsed time user system elapsed ratio outliers.depth.pond 0.969 0.21 0.061 19.328 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [32s/16s] OK Running ‘testthat.R’ [32s/15s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [189s/82s] OK * checking PDF version of manual ... [7s/7s] OK * checking HTML version of manual ... [6s/6s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 3 NOTEs