* installing *source* package ‘fastei’ ... ** this is package ‘fastei’ version ‘0.0.0.2’ ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (3)’ using C++ compiler: ‘Debian clang version 19.1.7 (3)’ clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bootstrap.c -o bootstrap.o bootstrap.c:131:9: warning: unused variable 'samples' [-Wunused-variable] 131 | int samples = bdim * bootiter; | ^~~~~~~ bootstrap.c:132:9: warning: unused variable 'matsize' [-Wunused-variable] 132 | int matsize = wmat->cols * xmat->rows; | ^~~~~~~ bootstrap.c:258:9: warning: unused variable 'matsize' [-Wunused-variable] 258 | int matsize = xmat->rows; | ^~~~~~~ 3 warnings generated. clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dynamic_program.c -o dynamic_program.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c exact.c -o exact.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hitAndRun.c -o hitAndRun.o hitAndRun.c:240:17: warning: variable 'totalVals' set but not used [-Wunused-but-set-variable] 240 | int totalVals = 0; | ^ hitAndRun.c:212:14: warning: unused variable 'arraySize' [-Wunused-variable] 212 | uint32_t arraySize = M * S; | ^~~~~~~~~ hitAndRun.c:536:20: warning: unused variable 'qsum' [-Wunused-variable] 536 | double qsum = 0; | ^~~~ hitAndRun.c:527:12: warning: variable 'borrar' set but not used [-Wunused-but-set-variable] 527 | double borrar = 0; | ^ hitAndRun.c:528:12: warning: variable 'borrar2' set but not used [-Wunused-but-set-variable] 528 | double borrar2 = 0; | ^ hitAndRun.c:604:25: warning: unused variable 'currentMatrix' [-Wunused-variable] 604 | Matrix *currentMatrix = currentSet->data[s]; // Z | ^~~~~~~~~~~~~ 6 warnings generated. clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c main.c -o main.o main.c:520:20: warning: '&&' within '||' [-Wlogical-op-parentheses] 520 | if (i >= 1 && (fabs(newLL - oldLL) < LLconvergence || convergeMatrix(&newProbability, currentP, convergence)) || | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ main.c:520:20: note: place parentheses around the '&&' expression to silence this warning 520 | if (i >= 1 && (fabs(newLL - oldLL) < LLconvergence || convergeMatrix(&newProbability, currentP, convergence)) || | ^ | ( ) 1 warning generated. clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c multinomial.c -o multinomial.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c multivariate-cdf.c -o multivariate-cdf.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c multivariate-pdf.c -o multivariate-pdf.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils_hash.c -o utils_hash.o clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils_matrix.c -o utils_matrix.o utils_matrix.c:65:13: warning: unused function 'transposeMatrix' [-Wunused-function] 65 | static void transposeMatrix(const double *src, int rows, int cols, double *dst) | ^~~~~~~~~~~~~~~ 1 warning generated. clang-19 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils_multivariate.c -o utils_multivariate.o utils_multivariate.c:227:10: warning: unused variable 'trans' [-Wunused-variable] 227 | char trans = 'N'; // (There's no separate transpose flag in dger, | ^~~~~ 1 warning generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c wrapper.cpp -o wrapper.o clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastei.so RcppExports.o bootstrap.o dynamic_program.o exact.o hitAndRun.o main.o multinomial.o multivariate-cdf.o multivariate-pdf.o utils_hash.o utils_matrix.o utils_multivariate.o wrapper.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/fastei.Rcheck/00LOCK-fastei/00new/fastei/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastei)