installing dependencies ‘ashr’

also installing the dependency ‘etrunct’

begin installing package ‘etrunct’
* installing *source* package ‘etrunct’ ...
** this is package ‘etrunct’ version ‘0.1’
** package ‘etrunct’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (etrunct)
begin installing package ‘ashr’
* installing *source* package ‘ashr’ ...
** this is package ‘ashr’ version ‘2.2-63’
** package ‘ashr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXbqTk0/R.INSTALL14e1fc340331fb/ashr/src'
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c MixSquarem.cpp -o MixSquarem.o
MixSquarem.cpp: In function ‘Rcpp::List squarem1(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::List)’:
MixSquarem.cpp:65:56: warning: ‘alpha’ may be used uninitialized [-Wmaybe-uninitialized]
   65 |     double sr2_scalar,sq2_scalar,sv2_scalar,srv_scalar,alpha,stepmin,stepmax;
      |                                                        ^~~~~
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o ashr.so MixSquarem.o RcppExports.o -L/home/hornik/tmp/R/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXbqTk0/R.INSTALL14e1fc340331fb/ashr/src'
installing to /home/hornik/tmp/CRAN_special_noSuggests/Library/00LOCK-ashr/00new/ashr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ashr)

checking fastTopics_0.7-38.tar.gz ...

Depends:
Package: fastTopics
  Depends: R (>= 3.3.0)
  Imports: graphics, utils, methods, stats, Matrix, gtools, quadprog,
    irlba, dplyr, Rtsne, uwot, ashr, Rcpp (>= 1.0.12), RcppParallel (>=
    5.1.7), RhpcBLASctl, parallel, progress, pbapply, rlang, ggplot2
    (>= 3.3.0), ggrepel (>= 0.9.0), cowplot, plotly, reshape2,
    htmlwidgets
  LinkingTo: Rcpp, RcppParallel, RcppArmadillo

Timings:
              user system elapsed
fastTopics 201.094 12.463 216.157

Results:
Check status summary:
                  OK
  Source packages  1

Check results summary:
fastTopics ... OK