* using log directory 'd:/RCompile/CRANincoming/R-devel/fastFMM.Rcheck' * using R Under development (unstable) (2023-11-10 r85507 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'fastFMM/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'fastFMM' version '0.1.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Erjia Cui ' New submission Possibly misspelled words in DESCRIPTION: Cui (9:87) Loewinger (9:63) Univariate (3:48) al (9:76, 9:94) et (9:73, 9:91) univariate (9:41) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'fastFMM' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [19s] ERROR Running examples in 'fastFMM-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: plot_fui > ### Title: Default FUI plotting > ### Aliases: plot_fui > > ### ** Examples > > library(refund) > data(DTI) > fit_dti <- fui(formula = cca ~ case + visit + sex + (visit | ID), + data = DTI, family = "gaussian", var = TRUE) [1] "Step 1: Fit Massively Univariate Mixed Models" [1] "Step 2: Smoothing" [1] "Step 3: Inference (Analytic)" [1] "Step 3.1: Preparation" [1] "Step 3.1.1: Preparation B" [1] "Step 3.1.1: Method of Moments Covariance Estimator" [1] "Step 3.1.2: Smooth G" [1] "Step 3.2: First step" Error in .local(x, y, ...) : non-conformable arguments Calls: fui ... matrix -> tcrossprod -> tcrossprod -> .local -> .Call Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [28s] OK * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE