test_that("residual computation works", { expect_error(compute_residuals("not_an_fHMM_model")) expect_message(compute_residuals(dax_model_3t, verbose = TRUE)) expect_error(compute_residuals(dax_model_3t, verbose = "not_TRUE_or_FALSE")) dax_model_3t_tmp <- dax_model_3t dax_model_3t_tmp$decoding <- NULL expect_warning(compute_residuals(dax_model_3t_tmp)) x <- compute_residuals(dax_model_3t, verbose = FALSE) expect_s3_class(x, "fHMM_model") expect_s3_class(x$residuals, "fHMM_residuals") expect_equal( round(fivenum(x$residuals), 2), c(-3.52, -0.66, 0.01, 0.67, 3.69) ) sim_model_2gamma <- decode_states(sim_model_2gamma, verbose = FALSE) x <- compute_residuals(sim_model_2gamma, verbose = FALSE) expect_s3_class(x, "fHMM_model") expect_s3_class(x$residuals, "fHMM_residuals") dax_vw_model <- decode_states(dax_vw_model, verbose = FALSE) x <- compute_residuals(dax_vw_model, verbose = FALSE) expect_s3_class(x, "fHMM_model") expect_s3_class(x$residuals, "fHMM_residuals") })