* using log directory ‘/home/hornik/tmp/CRAN_special_clang-san/ergm.Rcheck’ * using R Under development (unstable) (2024-11-05 r87288) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘ergm/DESCRIPTION’ ... OK * this is package ‘ergm’ version ‘4.7.5’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ergm’ can be installed ... [124s/125s] OK * used C compiler: ‘Debian clang version 18.1.8 (11)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/2s] OK * checking whether the package can be loaded with stated dependencies ... [2s/2s] OK * checking whether the package can be unloaded cleanly ... [2s/2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK * checking whether the namespace can be unloaded cleanly ... [2s/2s] OK * checking loading without being on the library search path ... [2s/2s] OK * checking whether startup messages can be suppressed ... [2s/2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [122s/122s] OK * checking Rd files ... [20s/21s] WARNING cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/map.c:15: note: cb_progress_done defined here #0 0x7f91aa4584e2 in call_exits /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:110:46 #1 0x7f91b02eb6c2 in R_ExecWithCleanup /home/hornik/src/R/src/main/context.c:913:5 #2 0x7f91aa457df2 in r_with_cleanup_context /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:133:14 #3 0x7f91aa457df2 in cleancall_call /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:60:14 #4 0x7f91b035780c in R_doDotCall /home/hornik/src/R/src/main/dotcode.c:757:11 #5 0x7f91b0525181 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8669:21 #6 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #7 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #8 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #9 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #10 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #11 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #12 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #13 0x7f91b04ac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #14 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #15 0x7f91b054cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #16 0x7f91b051cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #17 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #18 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #19 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #20 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #21 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #22 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #23 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #24 0x7f91b04ac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #25 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #26 0x7f91b054cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #27 0x7f91b051cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #28 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #29 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7f91acb411ff in eval_pipe_lazy /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:186:14 #35 0x7f91acb411ff in magrittr_pipe /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:105:11 #36 0x7f91b03492fb in do_External /home/hornik/src/R/src/main/dotcode.c:573:11 #37 0x7f91b04fc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #38 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #39 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #40 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #41 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #42 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #43 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #44 0x7f91b04adfeb in Rf_evalList /home/hornik/src/R/src/main/eval.c:3669:12 #45 0x7f91b04ac07f in Rf_eval /home/hornik/src/R/src/main/eval.c:1251:6 #46 0x7f91b04c4e35 in do_set /home/hornik/src/R/src/main/eval.c:3571:8 #47 0x7f91b04abe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #48 0x7f91b04bd3e5 in do_for /home/hornik/src/R/src/main/eval.c:2882:2 #49 0x7f91b04abe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #50 0x7f91b04c0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #51 0x7f91b04abe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #52 0x7f91b04abe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #53 0x7f91b04c0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #54 0x7f91b04abe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #55 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #56 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #57 0x7f91b050781e in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #58 0x7f91b050781e in bcEval_loop /home/hornik/src/R/src/main/eval.c:8090:16 #59 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #60 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #61 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #62 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #63 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #64 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #65 0x7f91b04ca934 in do_eval /home/hornik/src/R/src/main/eval.c:3945:13 #66 0x7f91b04fc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #67 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #68 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #69 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #70 0x7f91b04ac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #71 0x7f91b04cc237 in do_withVisible /home/hornik/src/R/src/main/eval.c:3988:9 #72 0x7f91b0647f53 in do_internal /home/hornik/src/R/src/main/names.c:1410:11 #73 0x7f91b04ed6ce in bcEval_loop /home/hornik/src/R/src/main/eval.c:8139:15 #74 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #75 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #76 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #77 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #78 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #79 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #80 0x7f91b05f79f5 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #81 0x7f91b05faa00 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #82 0x7f91b05fa824 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #83 0x7f91b05faaca in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #84 0x55921f319b84 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #85 0x7f91af83edb9 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #86 0x7f91af83ee74 in __libc_start_main csu/../csu/libc-start.c:360:3 #87 0x55921f23e360 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b360) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 /home/hornik/src/R/src/main/dotcode.c:1972:2: runtime error: call to function bib2be_main through pointer to incorrect function type 'void (*)(void *, void *, void *, void *)' /home/hornik/tmp/scratch/RtmpRTe542/R.INSTALL1f120b3f0fad3e/rbibutils/src/bib2be.c:133: note: bib2be_main defined here #0 0x7f91b0408075 in do_dotCode /home/hornik/src/R/src/main/dotcode.c:1972:2 #1 0x7f91b04fc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #2 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #3 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #4 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #5 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #6 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #7 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #8 0x7f91b04ca934 in do_eval /home/hornik/src/R/src/main/eval.c:3945:13 #9 0x7f91b04fc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #10 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #11 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #12 0x7f91b04ada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #13 0x7f91b04ac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #14 0x7f91b04cc237 in do_withVisible /home/hornik/src/R/src/main/eval.c:3988:9 #15 0x7f91b0647f53 in do_internal /home/hornik/src/R/src/main/names.c:1410:11 #16 0x7f91b04ed6ce in bcEval_loop /home/hornik/src/R/src/main/eval.c:8139:15 #17 0x7f91b04ad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #18 0x7f91b04ababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #19 0x7f91b04b6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #20 0x7f91b04b1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #21 0x7f91b04ac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #22 0x7f91b04ac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #23 0x7f91b05f79f5 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #24 0x7f91b05faa00 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #25 0x7f91b05fa824 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #26 0x7f91b05faaca in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #27 0x55921f319b84 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #28 0x7f91af83edb9 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #29 0x7f91af83ee74 in __libc_start_main csu/../csu/libc-start.c:360:3 #30 0x55921f23e360 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b360) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /home/hornik/src/R/src/main/dotcode.c:1972:2 * checking Rd metadata ... OK * checking Rd line widths ... NOTE cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/map.c:15: note: cb_progress_done defined here #0 0x7f6ac241e4e2 in call_exits /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:110:46 #1 0x7f6ad8aeb6c2 in R_ExecWithCleanup /home/hornik/src/R/src/main/context.c:913:5 #2 0x7f6ac241ddf2 in r_with_cleanup_context /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:133:14 #3 0x7f6ac241ddf2 in cleancall_call /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:60:14 #4 0x7f6ad8b5780c in R_doDotCall /home/hornik/src/R/src/main/dotcode.c:757:11 #5 0x7f6ad8d25181 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8669:21 #6 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #7 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #8 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #9 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #10 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #11 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #12 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #13 0x7f6ad8cac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #14 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #15 0x7f6ad8d4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #16 0x7f6ad8d1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #17 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #18 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #19 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #20 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #21 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #22 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #23 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #24 0x7f6ad8cac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #25 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #26 0x7f6ad8d4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #27 0x7f6ad8d1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #28 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #29 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7f6ad430e1ff in eval_pipe_lazy /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:186:14 #35 0x7f6ad430e1ff in magrittr_pipe /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:105:11 #36 0x7f6ad8b492fb in do_External /home/hornik/src/R/src/main/dotcode.c:573:11 #37 0x7f6ad8cfc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #38 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #39 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #40 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #41 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #42 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #43 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #44 0x7f6ad8cadfeb in Rf_evalList /home/hornik/src/R/src/main/eval.c:3669:12 #45 0x7f6ad8cac07f in Rf_eval /home/hornik/src/R/src/main/eval.c:1251:6 #46 0x7f6ad8cc4e35 in do_set /home/hornik/src/R/src/main/eval.c:3571:8 #47 0x7f6ad8cabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #48 0x7f6ad8cbd3e5 in do_for /home/hornik/src/R/src/main/eval.c:2882:2 #49 0x7f6ad8cabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #50 0x7f6ad8cc0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #51 0x7f6ad8cabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #52 0x7f6ad8cabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #53 0x7f6ad8cc0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #54 0x7f6ad8cabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #55 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #56 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #57 0x7f6ad8d0781e in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #58 0x7f6ad8d0781e in bcEval_loop /home/hornik/src/R/src/main/eval.c:8090:16 #59 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #60 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #61 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #62 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #63 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #64 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #65 0x7f6ad8cca934 in do_eval /home/hornik/src/R/src/main/eval.c:3945:13 #66 0x7f6ad8cfc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #67 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #68 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #69 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #70 0x7f6ad8cac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #71 0x7f6ad8ccc237 in do_withVisible /home/hornik/src/R/src/main/eval.c:3988:9 #72 0x7f6ad8e47f53 in do_internal /home/hornik/src/R/src/main/names.c:1410:11 #73 0x7f6ad8ced6ce in bcEval_loop /home/hornik/src/R/src/main/eval.c:8139:15 #74 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #75 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #76 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #77 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #78 0x7f6ad8cb3e2f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #79 0x7f6ad8cb3e2f in R_forceAndCall /home/hornik/src/R/src/main/eval.c:2460:8 #80 0x7f6ad8960e25 in do_lapply /home/hornik/src/R/src/main/apply.c:75:8 #81 0x7f6ad8e47f53 in do_internal /home/hornik/src/R/src/main/names.c:1410:11 #82 0x7f6ad8ced6ce in bcEval_loop /home/hornik/src/R/src/main/eval.c:8139:15 #83 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #84 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #85 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #86 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #87 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #88 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #89 0x7f6ad8cada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #90 0x7f6ad8d4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #91 0x7f6ad8d1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #92 0x7f6ad8cad404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #93 0x7f6ad8cababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #94 0x7f6ad8cb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #95 0x7f6ad8cb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #96 0x7f6ad8cac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #97 0x7f6ad8cac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #98 0x7f6ad8df79f5 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #99 0x7f6ad8dfaa00 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #100 0x7f6ad8dfa824 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #101 0x7f6ad8dfaaca in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #102 0x5601bb27fb84 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #103 0x7f6ad7f5adb9 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #104 0x7f6ad7f5ae74 in __libc_start_main csu/../csu/libc-start.c:360:3 #105 0x5601bb1a4360 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b360) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... WARNING cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/map.c:15: note: cb_progress_done defined here #0 0x7fd4c3b184e2 in call_exits /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:110:46 #1 0x7fd4d9ceb6c2 in R_ExecWithCleanup /home/hornik/src/R/src/main/context.c:913:5 #2 0x7fd4c3b17df2 in r_with_cleanup_context /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:133:14 #3 0x7fd4c3b17df2 in cleancall_call /home/hornik/tmp/scratch/Rtmpl7WgtJ/R.INSTALL1f3c3371e53792/purrr/src/cleancall.c:60:14 #4 0x7fd4d9d5780c in R_doDotCall /home/hornik/src/R/src/main/dotcode.c:757:11 #5 0x7fd4d9f25181 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8669:21 #6 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #7 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #8 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #9 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #10 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #11 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #12 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #13 0x7fd4d9eac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #14 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #15 0x7fd4d9f4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #16 0x7fd4d9f1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #17 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #18 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #19 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #20 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #21 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #22 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #23 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #24 0x7fd4d9eac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #25 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #26 0x7fd4d9f4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #27 0x7fd4d9f1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #28 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #29 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7fd4d5f081ff in eval_pipe_lazy /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:186:14 #35 0x7fd4d5f081ff in magrittr_pipe /home/hornik/tmp/scratch/RtmpwlxWZd/R.INSTALL1f1a086d6797ca/magrittr/src/pipe.c:105:11 #36 0x7fd4d9d492fb in do_External /home/hornik/src/R/src/main/dotcode.c:573:11 #37 0x7fd4d9efc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #38 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #39 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #40 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #41 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #42 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #43 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #44 0x7fd4d9eadfeb in Rf_evalList /home/hornik/src/R/src/main/eval.c:3669:12 #45 0x7fd4d9eac07f in Rf_eval /home/hornik/src/R/src/main/eval.c:1251:6 #46 0x7fd4d9ec4e35 in do_set /home/hornik/src/R/src/main/eval.c:3571:8 #47 0x7fd4d9eabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #48 0x7fd4d9ebd3e5 in do_for /home/hornik/src/R/src/main/eval.c:2882:2 #49 0x7fd4d9eabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #50 0x7fd4d9ec0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #51 0x7fd4d9eabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #52 0x7fd4d9eabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #53 0x7fd4d9ec0aa2 in do_begin /home/hornik/src/R/src/main/eval.c:3000:10 #54 0x7fd4d9eabe98 in Rf_eval /home/hornik/src/R/src/main/eval.c:1232:12 #55 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #56 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #57 0x7fd4d9f0781e in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #58 0x7fd4d9f0781e in bcEval_loop /home/hornik/src/R/src/main/eval.c:8090:16 #59 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #60 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #61 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #62 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #63 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #64 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #65 0x7fd4d9eca934 in do_eval /home/hornik/src/R/src/main/eval.c:3945:13 #66 0x7fd4d9efc497 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8119:14 #67 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #68 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #69 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #70 0x7fd4d9eac39d in Rf_eval /home/hornik/src/R/src/main/eval.c:1187:6 #71 0x7fd4d9ecc237 in do_withVisible /home/hornik/src/R/src/main/eval.c:3988:9 #72 0x7fd4da047f53 in do_internal /home/hornik/src/R/src/main/names.c:1410:11 #73 0x7fd4d9eed6ce in bcEval_loop /home/hornik/src/R/src/main/eval.c:8139:15 #74 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #75 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #76 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #77 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #78 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #79 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #80 0x7fd4d9eada5d in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #81 0x7fd4d9f4cd40 in getvar /home/hornik/src/R/src/main/eval.c:5835:3 #82 0x7fd4d9f1cab6 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7849:20 #83 0x7fd4d9ead404 in bcEval /home/hornik/src/R/src/main/eval.c:7502:16 #84 0x7fd4d9eababe in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #85 0x7fd4d9eb6730 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #86 0x7fd4d9eb1f77 in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #87 0x7fd4d9eac47b in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #88 0x7fd4d9eac47b in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #89 0x7fd4d9ff79f5 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #90 0x7fd4d9ffaa00 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #91 0x7fd4d9ffa824 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #92 0x7fd4d9ffaaca in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #93 0x55d455839b84 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #94 0x7fd4d915adb9 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #95 0x7fd4d915ae74 in __libc_start_main csu/../csu/libc-start.c:360:3 #96 0x55d45575e360 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b360) (BuildId: 71b7cc9351bcc02083f9df16c056d5fba06ed51c) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [2s/2s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [19s/19s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [651s/331s] OK Running ‘requireNamespaceTest.R’ [3s/3s] Running ‘testthat.R’ [648s/328s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... [25s/25s] OK * checking HTML version of manual ... [32s/33s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 WARNINGs, 1 NOTE