* using log directory ‘/home/hornik/tmp/CRAN_special_clang-san/ergm.Rcheck’ * using R Under development (unstable) (2024-10-11 r87227) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘ergm/DESCRIPTION’ ... OK * this is package ‘ergm’ version ‘4.7.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... INFO Package suggested but not available for checking: ‘covr’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ergm’ can be installed ... [125s/125s] OK * used C compiler: ‘Debian clang version 18.1.8 (11)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/2s] OK * checking whether the package can be loaded with stated dependencies ... [2s/2s] OK * checking whether the package can be unloaded cleanly ... [2s/2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK * checking whether the namespace can be unloaded cleanly ... [2s/2s] OK * checking loading without being on the library search path ... [2s/2s] OK * checking whether startup messages can be suppressed ... [2s/2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [123s/123s] OK * checking Rd files ... [20s/21s] WARNING cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/RtmptNmVsK/R.INSTALL2f1d16623abcb4/purrr/src/map.c:15: note: cb_progress_done defined here SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 /home/hornik/src/R/src/main/dotcode.c:1972:2: runtime error: call to function bib2be_main through pointer to incorrect function type 'void (*)(void *, void *, void *, void *)' /home/hornik/tmp/scratch/RtmpGRbvkI/R.INSTALL2ef299383b67a6/rbibutils/src/bib2be.c:133: note: bib2be_main defined here SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /home/hornik/src/R/src/main/dotcode.c:1972:2 * checking Rd metadata ... OK * checking Rd line widths ... NOTE cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/RtmptNmVsK/R.INSTALL2f1d16623abcb4/purrr/src/map.c:15: note: cb_progress_done defined here SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... WARNING cleancall.c:110:46: runtime error: call to function cb_progress_done through pointer to incorrect function type 'void (*)(void *)' /home/hornik/tmp/scratch/RtmptNmVsK/R.INSTALL2f1d16623abcb4/purrr/src/map.c:15: note: cb_progress_done defined here SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior cleancall.c:110:46 * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [2s/2s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [20s/21s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [676s/348s] OK Running ‘requireNamespaceTest.R’ [3s/3s] Running ‘testthat.R’ [672s/344s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... [25s/25s] OK * checking HTML version of manual ... [33s/35s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 WARNINGs, 1 NOTE