# File tests/testthat/test-parallel.R in package ergm, part of the # Statnet suite of packages for network analysis, https://statnet.org . # # This software is distributed under the GPL-3 license. It is free, # open source, and has the attribution requirements (GPL Section 7) at # https://statnet.org/attribution . # # Copyright 2003-2023 Statnet Commons ################################################################################ library(statnet.common) opttest({ data(florentine) for(type in c("PSOCK")){ test_that(paste0("parallel ", type), { gest <- ergm(flomarriage ~ edges + absdiff("wealth"), eval.loglik=TRUE, control=control.ergm(MCMC.burnin=1000, MCMC.interval=10, MCMLE.maxit=2, MCMC.samplesize=1000, force.main=TRUE, parallel=2, parallel.type=type)) print(summary(gest)) mcmc.diagnostics(gest) # FIXME: Set seeds and replace with actual values? sim.STAT.SEQ <- simulate(gest, nsim=5, control=control.simulate.ergm(parallel=2, parallel.type=type), output="stats", sequential=TRUE) expect_equal(nrow(sim.STAT.SEQ), 5) sim.STAT.seq <- simulate(gest, nsim=5, control=control.simulate.ergm(parallel=2, parallel.type=type), output="stats", sequential=FALSE) expect_equal(nrow(sim.STAT.seq), 5) sim.stat.SEQ <- simulate(gest, nsim=5, control=control.simulate.ergm(parallel=2, parallel.type=type), output="network", sequential=TRUE) expect_equal(length(sim.stat.SEQ), 5) sim.stat.seq <- simulate(gest, nsim=5, control=control.simulate.ergm(parallel=2, parallel.type=type), output="network", sequential=FALSE) expect_equal(length(sim.stat.seq), 5) if(exists("cl")){ stopCluster(cl) rm(cl) } }) } # pre-made SOCK cluster test_that("pre-made SOCK cluster", { library(parallel) clus <- makeCluster(2, type='PSOCK') clus data(florentine) t0 <- proc.time() fauxmodel.01 <- ergm(flomarriage ~ edges + isolates + gwesp(0.2, fixed=T), control=control.ergm(parallel=clus, MCMLE.maxit=100)) proc.time() - t0 sim.test <- simulate(network(1000) ~ edges + gwesp(0.5, fixed = TRUE) + mutual + istar(2), coef = c(-5, 1.3, 1.5, -0.5), nsim = 4, control = control.simulate.formula(parallel = clus, parallel.type = "PSOCK")) stopCluster(clus) }) }, "parallel") if(inherits(try(get.MT_terms(), silent=TRUE),"try-error")){ message("Skipping OpenMP test. This package installation was built without OpenMP support.") }else{ test_that("OpenMP", { library(ergm) data(florentine) set.seed(0) sim.ser <- simulate(flomarriage~edges+triangle, nsim=100, control=control.simulate(MCMC.burnin=1, MCMC.interval=1), output="stats") prev <- set.MT_terms(2) set.seed(0) sim.par <- simulate(flomarriage~edges+triangle, nsim=100, control=control.simulate(MCMC.burnin=1, MCMC.interval=1), output="stats") set.MT_terms(prev) expect_true(all.equal(sim.ser,sim.par)) }) }