* using log directory ‘/srv/hornik/tmp/CRAN/epos.Rcheck’
* using R Under development (unstable) (2024-03-14 r86131)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 17.0.6 (5)
    Debian flang-new version 17.0.6 (5)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘epos/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘epos’ version ‘1.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [4s/5s] NOTE
Maintainer: ‘Bernd Mueller <bernd.mueller@zbmed.de>’

Found the following (possibly) invalid URLs:
  URL: https://travis-ci.org/bernd-mueller/epos (moved to https://app.travis-ci.com/bernd-mueller/epos)
    From: README.md
    Status: 301
    Message: Moved Permanently
  For content that is 'Moved Permanently', please change http to https,
  add trailing slashes, or replace the old by the new URL.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘epos’ can be installed ... [3s/3s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
  ‘codemeta.json’
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s/5s] NOTE
customQuad: no visible global function definition for ‘flog.error’
customQuad: no visible global function definition for ‘gList’
customQuad: no visible global function definition for ‘gpar’
customQuad: no visible global function definition for ‘ellipse’
customQuad: no visible global function definition for ‘textGrob’
customQuad: no visible global function definition for ‘find.cat.pos’
customQuad: no visible global function definition for ‘grid.draw’
drawEllipses: no visible global function definition for ‘geom_ellipse’
drawEllipses: no visible binding for global variable ‘x0’
drawEllipses: no visible binding for global variable ‘y0’
drawEllipses: no visible binding for global variable ‘a’
drawEllipses: no visible binding for global variable ‘b’
drawEllipses: no visible binding for global variable ‘angle’
drawEllipses: no visible binding for global variable ‘m1’
drawEllipses: no visible binding for global variable ‘fill’
drawEllipses: no visible global function definition for ‘coord_fixed’
drawEuler: no visible global function definition for ‘plotVenn’
drawEuler: no visible global function definition for ‘showSVG’
Undefined global functions or variables:
  a angle b coord_fixed ellipse fill find.cat.pos flog.error gList
  geom_ellipse gpar grid.draw m1 plotVenn showSVG textGrob x0 y0

Found if() conditions comparing class() to string:
File ‘epos/R/customQuad.R’: if (!(class(cat.just) == "list" & length(cat.just) == 4 & length(cat.just[[1]]) == 2 & length(cat.just[[2]]) == 2 & length(cat.just[[3]]) == 2 & length(cat.just[[4]]) == 2)) ...
File ‘epos/R/customQuad.R’: if (class(cex.prop) != "function") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [7s/7s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [3s/3s] OK
  Running ‘testthat.R’ [3s/3s]
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... NOTE
Found the following files/directories:
  ‘sortedNeuroTable.tex’
* checking for detritus in the temp directory ... OK
* DONE
Status: 4 NOTEs