R Under development (unstable) (2025-11-12 r89009 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > > if (requireNamespace("tinytest", quietly = TRUE)) { + + test_tmat_matches_expected <- function(tmat) { + # Check for out of bounds values + tinytest::expect_false(any(tmat < 0)) + tinytest::expect_false(any(tmat > 1)) + } + + tinytest::test_package("epiworldR") + } Thank you for using epiworldR! Please consider citing it in your work. You can find the citation information by running citation("epiworldR") test-agents-and-dist-virus-tool.R 0 tests test-agents-and-dist-virus-tool.R 0 tests _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 0 tests test-agents-and-dist-virus-tool.R 0 tests test-agents-and-dist-virus-tool.R 1 tests OK test-agents-and-dist-virus-tool.R 1 tests OK Starting multiple runs (100) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 1 tests OK test-agents-and-dist-virus-tool.R 1 tests OK test-agents-and-dist-virus-tool.R 1 tests OK test-agents-and-dist-virus-tool.R 1 tests OK test-agents-and-dist-virus-tool.R 2 tests OK test-agents-and-dist-virus-tool.R 2 tests OK test-agents-and-dist-virus-tool.R 2 tests OK test-agents-and-dist-virus-tool.R 2 tests OK _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 2 tests OK test-agents-and-dist-virus-tool.R 2 tests OK test-agents-and-dist-virus-tool.R 3 tests OK test-agents-and-dist-virus-tool.R 4 tests OK test-agents-and-dist-virus-tool.R 4 tests OK test-agents-and-dist-virus-tool.R 4 tests OK Starting multiple runs (100) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 4 tests OK test-agents-and-dist-virus-tool.R 4 tests OK test-agents-and-dist-virus-tool.R 4 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 5 tests OK test-agents-and-dist-virus-tool.R 6 tests OK test-agents-and-dist-virus-tool.R 6 tests OK Starting multiple runs (100) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 6 tests OK test-agents-and-dist-virus-tool.R 6 tests OK test-agents-and-dist-virus-tool.R 6 tests OK test-agents-and-dist-virus-tool.R 6 tests OK test-agents-and-dist-virus-tool.R 7 tests OK test-agents-and-dist-virus-tool.R 7 tests OK test-agents-and-dist-virus-tool.R 7 tests OK test-agents-and-dist-virus-tool.R 7 tests OK _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 7 tests OK test-agents-and-dist-virus-tool.R 7 tests OK test-agents-and-dist-virus-tool.R 8 tests OK test-agents-and-dist-virus-tool.R 9 tests OK test-agents-and-dist-virus-tool.R 9 tests OK test-agents-and-dist-virus-tool.R 9 tests OK Starting multiple runs (100) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-agents-and-dist-virus-tool.R 9 tests OK test-agents-and-dist-virus-tool.R 9 tests OK test-agents-and-dist-virus-tool.R 9 tests OK test-agents-and-dist-virus-tool.R 10 tests OK 2.8s test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 0 tests test-diffnet.R................ 1 tests OK test-diffnet.R................ 2 tests OK test-diffnet.R................ 3 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 4 tests OK test-diffnet.R................ 5 tests OK test-diffnet.R................ 6 tests OK test-diffnet.R................ 7 tests OK test-diffnet.R................ 8 tests OK test-diffnet.R................ 9 tests OK test-diffnet.R................ 10 tests OK test-diffnet.R................ 11 tests OK test-diffnet.R................ 12 tests OK 9ms test-get.R.................... 0 tests test-get.R.................... 0 tests test-get.R.................... 1 tests OK test-get.R.................... 2 tests OK test-get.R.................... 3 tests OK test-get.R.................... 4 tests OK test-get.R.................... 5 tests OK test-get.R.................... 6 tests OK test-get.R.................... 6 tests OK 5ms test-lfmcmc.R................. 0 tests test-lfmcmc.R................. 0 tests test-lfmcmc.R................. 0 tests test-lfmcmc.R................. 0 tests test-lfmcmc.R................. 0 tests test-lfmcmc.R................. 1 tests OK test-lfmcmc.R................. 2 tests OK test-lfmcmc.R................. 3 tests OK test-lfmcmc.R................. 4 tests OK test-lfmcmc.R................. 5 tests OK test-lfmcmc.R................. 5 tests OK test-lfmcmc.R................. 6 tests OK test-lfmcmc.R................. 6 tests OK test-lfmcmc.R................. 6 tests OK test-lfmcmc.R................. 6 tests OK test-lfmcmc.R................. 6 tests OK test-lfmcmc.R................. 7 tests OK test-lfmcmc.R................. 8 tests OK test-lfmcmc.R................. 9 tests OK test-lfmcmc.R................. 10 tests OK test-lfmcmc.R................. 10 tests OK test-lfmcmc.R................. 10 tests OK test-lfmcmc.R................. 10 tests OK test-lfmcmc.R................. 11 tests OK test-lfmcmc.R................. 12 tests OK test-lfmcmc.R................. 13 tests OK test-lfmcmc.R................. 14 tests OK test-lfmcmc.R................. 15 tests OK test-lfmcmc.R................. 16 tests OK test-lfmcmc.R................. 17 tests OK test-lfmcmc.R................. 18 tests OK test-lfmcmc.R................. 19 tests OK test-lfmcmc.R................. 20 tests OK test-lfmcmc.R................. 21 tests OK test-lfmcmc.R................. 22 tests OK test-lfmcmc.R................. 22 tests OK test-lfmcmc.R................. 23 tests OK test-lfmcmc.R................. 24 tests OK test-lfmcmc.R................. 25 tests OK test-lfmcmc.R................. 26 tests OK test-lfmcmc.R................. 26 tests OK test-lfmcmc.R................. 27 tests OK test-lfmcmc.R................. 28 tests OK test-lfmcmc.R................. 29 tests OK test-lfmcmc.R................. 30 tests OK test-lfmcmc.R................. 31 tests OK test-lfmcmc.R................. 32 tests OK test-lfmcmc.R................. 33 tests OK test-lfmcmc.R................. 34 tests OK test-lfmcmc.R................. 35 tests OK test-lfmcmc.R................. 36 tests OK test-lfmcmc.R................. 37 tests OK test-lfmcmc.R................. 38 tests OK test-lfmcmc.R................. 39 tests OK test-lfmcmc.R................. 39 tests OK test-lfmcmc.R................. 40 tests OK test-lfmcmc.R................. 40 tests OK test-lfmcmc.R................. 40 tests OK test-lfmcmc.R................. 40 tests OK test-lfmcmc.R................. 41 tests OK test-lfmcmc.R................. 42 tests OK test-lfmcmc.R................. 43 tests OK test-lfmcmc.R................. 44 tests OK test-lfmcmc.R................. 45 tests OK test-lfmcmc.R................. 46 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 47 tests OK test-lfmcmc.R................. 48 tests OK test-lfmcmc.R................. 49 tests OK test-lfmcmc.R................. 50 tests OK test-lfmcmc.R................. 51 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 52 tests OK test-lfmcmc.R................. 53 tests OK test-lfmcmc.R................. 53 tests OK test-lfmcmc.R................. 53 tests OK test-lfmcmc.R................. 54 tests OK test-lfmcmc.R................. 55 tests OK test-lfmcmc.R................. 56 tests OK test-lfmcmc.R................. 57 tests OK test-lfmcmc.R................. 58 tests OK test-lfmcmc.R................. 59 tests OK test-lfmcmc.R................. 60 tests OK test-lfmcmc.R................. 61 tests OK test-lfmcmc.R................. 62 tests OK test-lfmcmc.R................. 63 tests OK test-lfmcmc.R................. 64 tests OK test-lfmcmc.R................. 65 tests OK test-lfmcmc.R................. 66 tests OK test-lfmcmc.R................. 67 tests OK test-lfmcmc.R................. 68 tests OK test-lfmcmc.R................. 69 tests OK test-lfmcmc.R................. 70 tests OK test-lfmcmc.R................. 71 tests OK test-lfmcmc.R................. 72 tests OK test-lfmcmc.R................. 73 tests OK test-lfmcmc.R................. 74 tests OK test-lfmcmc.R................. 75 tests OK test-lfmcmc.R................. 76 tests OK test-lfmcmc.R................. 77 tests OK test-lfmcmc.R................. 78 tests OK test-lfmcmc.R................. 79 tests OK test-lfmcmc.R................. 80 tests OK test-lfmcmc.R................. 81 tests OK test-lfmcmc.R................. 82 tests OK 17.6s test-measles-quarantine-errors.R 0 tests test-measles-quarantine-errors.R 1 tests OK test-measles-quarantine-errors.R 2 tests OK test-measles-quarantine-errors.R 2 tests OK test-measles-quarantine-errors.R 3 tests OK test-measles-quarantine-errors.R 4 tests OK test-measles-quarantine-errors.R 5 tests OK test-measles-quarantine-errors.R 6 tests OK test-measles-quarantine-errors.R 7 tests OK test-measles-quarantine-errors.R 8 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 9 tests OK test-measles-quarantine-errors.R 10 tests OK test-measles-quarantine-errors.R 11 tests OK test-measles-quarantine-errors.R 12 tests OK test-measles-quarantine-errors.R 13 tests OK test-measles-quarantine-errors.R 14 tests OK test-measles-quarantine-errors.R 15 tests OK test-measles-quarantine-errors.R 16 tests OK test-measles-quarantine-errors.R 17 tests OK test-measles-quarantine-errors.R 18 tests OK test-measles-quarantine-errors.R 19 tests OK test-measles-quarantine-errors.R 20 tests OK test-measles-quarantine-errors.R 21 tests OK test-measles-quarantine-errors.R 22 tests OK test-measles-quarantine-errors.R 23 tests OK test-measles-quarantine-errors.R 24 tests OK test-measles-quarantine-errors.R 25 tests OK test-measles-quarantine-errors.R 26 tests OK test-measles-quarantine-errors.R 27 tests OK test-measles-quarantine-errors.R 28 tests OK test-measles-quarantine-errors.R 29 tests OK test-measles-quarantine-errors.R 30 tests OK test-measles-quarantine-errors.R 31 tests OK test-measles-quarantine-errors.R 32 tests OK test-measles-quarantine-errors.R 33 tests OK test-measles-quarantine-errors.R 34 tests OK test-measles-quarantine-errors.R 35 tests OK test-measles-quarantine-errors.R 36 tests OK test-measles-quarantine-errors.R 37 tests OK test-measles-quarantine-errors.R 38 tests OK test-measles-quarantine-errors.R 39 tests OK 45ms test-measles-quarantine-math.R 0 tests Starting multiple runs (200) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. ----- PASSED : test-measles-quarantine-math.R<4--39> call| expect_equal(r0_obs, R0, tolerance = 0.1) Starting multiple runs (200) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. ----- PASSED : test-measles-quarantine-math.R<4--39> call| expect_equal(r0_obs, R0, tolerance = 0.1) Starting multiple runs (200) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. ----- PASSED : test-measles-quarantine-math.R<4--39> call| expect_equal(r0_obs, R0, tolerance = 0.1) test-measles-quarantine-math.R 3 tests OK 3.3s test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixing.R.......... 0 tests ________________________________________________________________________________ ________________________________________________________________________________ SIMULATION STUDY Name of the model : Measles with Mixing and Quarantine Population size : 9000 Agents' data : (none) Number of entities : 3 Days (duration) : 100 (of 100) Number of viruses : 1 Last run elapsed t : 45.00ms Last run speed : 19.62 million agents x day / second Rewiring : off Global events: - Update infected individuals (runs daily) Virus(es): - Measles Tool(s): - Vaccine Model parameters: - (IGNORED) Vax improved recovery : 0.8000 - Contact rate : 15.0000 - Contact tracing days prior : 4.0000 - Contact tracing success rate : 0.8000 - Days undetected : 2.0000 - Hospitalization period : 10.0000 - Hospitalization rate : 0.1000 - Incubation period : 10.0000 - Isolation period : 10.0000 - Isolation willingness : 0.8000 - Prodromal period : 3.0000 - Quarantine period : 14.0000 - Quarantine willingness : 0.9000 - Rash period : 7.0000 - Transmission rate : 0.9000 - Vaccination rate : 0.9500 - Vax efficacy : 0.9700 Distribution of the population at time 100: - ( 0) Susceptible : 8999 -> 8999 - ( 1) Exposed : 1 -> 0 - ( 2) Prodromal : 0 -> 0 - ( 3) Rash : 0 -> 0 - ( 4) Isolated : 0 -> 0 - ( 5) Isolated Recovered : 0 -> 0 - ( 6) Detected Hospitalized : 0 -> 0 - ( 7) Quarantined Exposed : 0 -> 0 - ( 8) Quarantined Susceptible : 0 -> 0 - ( 9) Quarantined Prodromal : 0 -> 0 - (10) Quarantined Recovered : 0 -> 0 - (11) Hospitalized : 0 -> 0 - (12) Recovered : 0 -> 1 Transition Probabilities: - Susceptible 1.00 0.00 - - - - - - - - - - - - Exposed - 0.96 0.04 - - - - - - - - - - - Prodromal - - - 1.00 - - - - - - - - - - Rash - - - - - 1.00 - - - - - - - - Isolated - - - - - - - - - - - - - - Isolated Recovered - - - - - 0.89 - - - - - - 0.11 - Detected Hospitalized - - - - - - - - - - - - - - Quarantined Exposed - - - - - - - - - - - - - - Quarantined Susceptible - - - - - - - - - - - - - - Quarantined Prodromal - - - - - - - - - - - - - - Quarantined Recovered - - - - - - - - - - - - - - Hospitalized - - - - - - - - - - - - - - Recovered - - - - - - - - - - - - 1.00 test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 0 tests test-measlesmixing.R.......... 1 tests OK test-measlesmixing.R.......... 2 tests OK test-measlesmixing.R.......... 3 tests OK test-measlesmixing.R.......... 4 tests OK test-measlesmixing.R.......... 5 tests OK test-measlesmixing.R.......... 6 tests OK test-measlesmixing.R.......... 7 tests OK test-measlesmixing.R.......... 8 tests OK 0.1s test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine-multiple.R 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine-multiple.R 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine-multiple.R 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine-multiple.R 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine-multiple.R 0 tests test-measlesmixingriskquarantine-multiple.R 1 tests OK test-measlesmixingriskquarantine-multiple.R 2 tests OK test-measlesmixingriskquarantine-multiple.R 3 tests OK test-measlesmixingriskquarantine-multiple.R 4 tests OK test-measlesmixingriskquarantine-multiple.R 5 tests OK test-measlesmixingriskquarantine-multiple.R 6 tests OK test-measlesmixingriskquarantine-multiple.R 7 tests OK 1.9s test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-measlesmixingriskquarantine.R 0 tests ________________________________________________________________________________ ________________________________________________________________________________ SIMULATION STUDY Name of the model : Measles with Mixing and Risk-based Quarantine Population size : 9000 Agents' data : (none) Number of entities : 3 Days (duration) : 100 (of 100) Number of viruses : 1 Last run elapsed t : 47.00ms Last run speed : 19.10 million agents x day / second Rewiring : off Global events: - Update infected individuals (runs daily) Virus(es): - Measles Tool(s): - Vaccine Model parameters: - Contact rate : 15.0000 - Contact tracing days prior : 4.0000 - Contact tracing success rate : 0.8000 - Days undetected : 2.0000 - Detection rate quarantine : 0.5000 - Hospitalization period : 10.0000 - Hospitalization rate : 0.1000 - Incubation period : 10.0000 - Isolation period : 10.0000 - Isolation willingness : 0.8000 - Prodromal period : 3.0000 - Quarantine period high : 21.0000 - Quarantine period low : 7.0000 - Quarantine period medium : 14.0000 - Quarantine willingness : 0.9000 - Rash period : 7.0000 - Transmission rate : 0.9000 - Vaccination rate : 0.9500 - Vax efficacy : 0.9700 Distribution of the population at time 100: - ( 0) Susceptible : 8999 -> 8999 - ( 1) Exposed : 1 -> 0 - ( 2) Prodromal : 0 -> 0 - ( 3) Rash : 0 -> 0 - ( 4) Isolated : 0 -> 0 - ( 5) Isolated Recovered : 0 -> 0 - ( 6) Detected Hospitalized : 0 -> 0 - ( 7) Quarantined Exposed : 0 -> 0 - ( 8) Quarantined Susceptible : 0 -> 0 - ( 9) Quarantined Prodromal : 0 -> 0 - (10) Quarantined Recovered : 0 -> 0 - (11) Hospitalized : 0 -> 0 - (12) Recovered : 0 -> 1 Transition Probabilities: - Susceptible 1.00 0.00 - - - - - - 0.00 - - - - - Exposed - 0.96 0.04 - - - - - - - - - - - Prodromal - - - 1.00 - - - - - - - - - - Rash - - - - - 1.00 - - - - - - - - Isolated - - - - - - - - - - - - - - Isolated Recovered - - - - - 0.89 - - - - - - 0.11 - Detected Hospitalized - - - - - - - - - - - - - - Quarantined Exposed - - - - - - - - - - - - - - Quarantined Susceptible 0.09 - - - - - - - 0.91 - - - - - Quarantined Prodromal - - - - - - - - - - - - - - Quarantined Recovered - - - - - - - - - - - - - - Hospitalized - - - - - - - - - - - - - - Recovered - - - - - - - - - - - - 1.00 test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 0 tests test-measlesmixingriskquarantine.R 1 tests OK test-measlesmixingriskquarantine.R 2 tests OK test-measlesmixingriskquarantine.R 3 tests OK test-measlesmixingriskquarantine.R 4 tests OK test-measlesmixingriskquarantine.R 5 tests OK test-measlesmixingriskquarantine.R 6 tests OK test-measlesmixingriskquarantine.R 7 tests OK test-measlesmixingriskquarantine.R 8 tests OK test-measlesmixingriskquarantine.R 9 tests OK test-measlesmixingriskquarantine.R 10 tests OK test-measlesmixingriskquarantine.R 11 tests OK test-measlesmixingriskquarantine.R 12 tests OK test-measlesmixingriskquarantine.R 13 tests OK test-measlesmixingriskquarantine.R 14 tests OK test-measlesmixingriskquarantine.R 15 tests OK test-measlesmixingriskquarantine.R 16 tests OK test-measlesmixingriskquarantine.R 17 tests OK test-measlesmixingriskquarantine.R 18 tests OK test-measlesmixingriskquarantine.R 19 tests OK test-measlesmixingriskquarantine.R 20 tests OK test-measlesmixingriskquarantine.R 21 tests OK test-measlesmixingriskquarantine.R 22 tests OK test-measlesmixingriskquarantine.R 23 tests OK test-measlesmixingriskquarantine.R 24 tests OK test-measlesmixingriskquarantine.R 25 tests OK test-measlesmixingriskquarantine.R 26 tests OK 95ms test-model-diagram.R.......... 0 tests test-model-diagram.R.......... 0 tests test-model-diagram.R.......... 0 tests test-model-diagram.R.......... 0 tests test-model-diagram.R.......... 1 tests OK test-model-diagram.R.......... 2 tests OK test-model-diagram.R.......... 3 tests OK test-model-diagram.R.......... 4 tests OK test-model-diagram.R.......... 4 tests OK test-model-diagram.R.......... 5 tests OK test-model-diagram.R.......... 6 tests OK test-model-diagram.R.......... 7 tests OK test-model-diagram.R.......... 8 tests OK test-model-diagram.R.......... 9 tests OK test-model-diagram.R.......... 9 tests OK test-model-diagram.R.......... 10 tests OK test-model-diagram.R.......... 10 tests OK test-model-diagram.R.......... 11 tests OK test-model-diagram.R.......... 12 tests OK test-model-diagram.R.......... 13 tests OK test-model-diagram.R.......... 14 tests OK test-model-diagram.R.......... 14 tests OK test-model-diagram.R.......... 15 tests OK test-model-diagram.R.......... 15 tests OK test-model-diagram.R.......... 16 tests OK test-model-diagram.R.......... 16 tests OK test-model-diagram.R.......... 17 tests OK test-model-diagram.R.......... 18 tests OK test-model-diagram.R.......... 19 tests OK test-model-diagram.R.......... 20 tests OK test-model-diagram.R.......... 20 tests OK test-model-diagram.R.......... 21 tests OK test-model-diagram.R.......... 21 tests OK test-model-diagram.R.......... 22 tests OK test-model-diagram.R.......... 23 tests OK test-model-diagram.R.......... 24 tests OK test-model-diagram.R.......... 25 tests OK test-model-diagram.R.......... 26 tests OK test-model-diagram.R.......... 27 tests OK test-model-diagram.R.......... 27 tests OK test-model-diagram.R.......... 28 tests OK test-model-diagram.R.......... 28 tests OK test-model-diagram.R.......... 29 tests OK test-model-diagram.R.......... 30 tests OK test-model-diagram.R.......... 31 tests OK test-model-diagram.R.......... 32 tests OK test-model-diagram.R.......... 33 tests OK test-model-diagram.R.......... 34 tests OK test-model-diagram.R.......... 35 tests OK test-model-diagram.R.......... 36 tests OK test-model-diagram.R.......... 37 tests OK 57ms test-model-methods.R.......... 0 tests test-model-methods.R.......... 0 tests test-model-methods.R.......... 0 tests test-model-methods.R.......... 1 tests OK test-model-methods.R.......... 2 tests OK test-model-methods.R.......... 3 tests OK test-model-methods.R.......... 4 tests OK test-model-methods.R.......... 4 tests OK test-model-methods.R.......... 5 tests OK test-model-methods.R.......... 6 tests OK test-model-methods.R.......... 7 tests OK test-model-methods.R.......... 8 tests OK test-model-methods.R.......... 9 tests OK 38ms test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 0 tests _________________________________________________________________________ |Running the model... |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. | test-multiple.R............... 0 tests test-multiple.R............... 0 tests Starting multiple runs (50) using 2 thread(s) _________________________________________________________________________ _________________________________________________________________________ ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 0 tests test-multiple.R............... 1 tests OK test-multiple.R............... 2 tests OK 3.5s test-seir.R................... 1 tests OK test-seir.R................... 2 tests OK test-seir.R................... 3 tests OK test-seir.R................... 4 tests OK test-seir.R................... 5 tests OK test-seir.R................... 6 tests OK test-seir.R................... 7 tests OK test-seir.R................... 8 tests OK test-seir.R................... 9 tests OK test-seir.R................... 10 tests OK test-seir.R................... 11 tests OK test-seir.R................... 11 tests OK test-seir.R................... 12 tests OK test-seir.R................... 13 tests OK test-seir.R................... 14 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 15 tests OK test-seir.R................... 16 tests OK test-seir.R................... 17 tests OK test-seir.R................... 18 tests OK test-seir.R................... 19 tests OK test-seir.R................... 20 tests OK test-seir.R................... 21 tests OK test-seir.R................... 22 tests OK test-seir.R................... 23 tests OK test-seir.R................... 24 tests OK test-seir.R................... 25 tests OK 0.1s test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 0 tests test-seirconn.R............... 1 tests OK test-seirconn.R............... 2 tests OK test-seirconn.R............... 3 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 4 tests OK test-seirconn.R............... 5 tests OK test-seirconn.R............... 6 tests OK test-seirconn.R............... 7 tests OK test-seirconn.R............... 8 tests OK test-seirconn.R............... 9 tests OK test-seirconn.R............... 10 tests OK test-seirconn.R............... 11 tests OK test-seirconn.R............... 12 tests OK test-seirconn.R............... 13 tests OK test-seirconn.R............... 14 tests OK test-seirconn.R............... 15 tests OK test-seirconn.R............... 16 tests OK test-seirconn.R............... 17 tests OK test-seirconn.R............... 18 tests OK 10ms test-seird.R.................. 0 tests test-seird.R.................. 0 tests test-seird.R.................. 0 tests test-seird.R.................. 0 tests test-seird.R.................. 0 tests test-seird.R.................. 0 tests test-seird.R.................. 1 tests OK test-seird.R.................. 2 tests OK test-seird.R.................. 3 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 4 tests OK test-seird.R.................. 5 tests OK test-seird.R.................. 6 tests OK test-seird.R.................. 7 tests OK test-seird.R.................. 8 tests OK test-seird.R.................. 9 tests OK test-seird.R.................. 10 tests OK test-seird.R.................. 11 tests OK test-seird.R.................. 12 tests OK test-seird.R.................. 13 tests OK test-seird.R.................. 14 tests OK test-seird.R.................. 15 tests OK test-seird.R.................. 16 tests OK 8ms test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 0 tests test-seirdconn.R.............. 1 tests OK test-seirdconn.R.............. 2 tests OK test-seirdconn.R.............. 3 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 4 tests OK test-seirdconn.R.............. 5 tests OK test-seirdconn.R.............. 6 tests OK test-seirdconn.R.............. 7 tests OK test-seirdconn.R.............. 8 tests OK test-seirdconn.R.............. 9 tests OK test-seirdconn.R.............. 10 tests OK test-seirdconn.R.............. 11 tests OK test-seirdconn.R.............. 12 tests OK test-seirdconn.R.............. 13 tests OK test-seirdconn.R.............. 14 tests OK test-seirdconn.R.............. 15 tests OK test-seirdconn.R.............. 16 tests OK test-seirdconn.R.............. 17 tests OK test-seirdconn.R.............. 18 tests OK test-seirdconn.R.............. 19 tests OK test-seirdconn.R.............. 20 tests OK 9ms test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-seirmixing.R............. 0 tests ________________________________________________________________________________ ________________________________________________________________________________ SIMULATION STUDY Name of the model : Susceptible-Exposed-Infected-Removed (SEIR) with Mixing Population size : 9000 Agents' data : (none) Number of entities : 3 Days (duration) : 100 (of 100) Number of viruses : 1 Last run elapsed t : 41.00ms Last run speed : 21.64 million agents x day / second Rewiring : off Global events: - Update infected individuals (runs daily) Virus(es): - Flu Tool(s): (none) Model parameters: - Avg. Incubation days : 0.0090 - Contact rate : 40.0000 - Prob. Recovery : 0.1000 - Prob. Transmission : 1.0000 Distribution of the population at time 100: - (0) Susceptible : 8999 -> 6000 - (1) Exposed : 1 -> 0 - (2) Infected : 0 -> 0 - (3) Recovered : 0 -> 3000 Transition Probabilities: - Susceptible 1.00 0.00 - - - Exposed - - 1.00 - - Infected - - 0.90 0.10 - Recovered - - - 1.00 test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 0 tests test-seirmixing.R............. 1 tests OK test-seirmixing.R............. 2 tests OK test-seirmixing.R............. 3 tests OK test-seirmixing.R............. 4 tests OK test-seirmixing.R............. 5 tests OK test-seirmixing.R............. 6 tests OK test-seirmixing.R............. 7 tests OK test-seirmixing.R............. 8 tests OK test-seirmixing.R............. 9 tests OK test-seirmixing.R............. 10 tests OK test-seirmixing.R............. 11 tests OK test-seirmixing.R............. 12 tests OK test-seirmixing.R............. 13 tests OK test-seirmixing.R............. 14 tests OK test-seirmixing.R............. 15 tests OK test-seirmixing.R............. 16 tests OK 66ms test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests _________________________________________________________________________ Running the model... ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| done. test-seirmixingquarantine.R... 0 tests ________________________________________________________________________________ ________________________________________________________________________________ SIMULATION STUDY Name of the model : SEIR with Mixing and Quarantine Population size : 9000 Agents' data : (none) Number of entities : 3 Days (duration) : 100 (of 100) Number of viruses : 1 Last run elapsed t : 51.00ms Last run speed : 17.42 million agents x day / second Rewiring : off Global events: - Update infected individuals (runs daily) Virus(es): - Flu Tool(s): (none) Model parameters: - Avg. Incubation days : 0.0090 - Contact rate : 40.0000 - Contact tracing days prior : 3.0000 - Contact tracing success rate : 0.7000 - Days undetected : 3.0000 - Hospitalization period : 7.0000 - Hospitalization rate : 0.0500 - Isolation period : 7.0000 - Isolation willingness : 0.5000 - Prob. Recovery : 0.1000 - Prob. Transmission : 1.0000 - Quarantine period : 14.0000 - Quarantine willingness : 0.8000 Distribution of the population at time 100: - ( 0) Susceptible : 8999 -> 6000 - ( 1) Exposed : 1 -> 0 - ( 2) Infected : 0 -> 0 - ( 3) Isolated : 0 -> 0 - ( 4) Detected Hospitalized : 0 -> 0 - ( 5) Quarantined Susceptible : 0 -> 0 - ( 6) Quarantined Exposed : 0 -> 0 - ( 7) Isolated Recovered : 0 -> 0 - ( 8) Hospitalized : 0 -> 0 - ( 9) Recovered : 0 -> 3000 Transition Probabilities: - Susceptible 1.00 0.00 - - - - 0.00 - - - - Exposed - - 0.92 0.08 - - - - - - - Infected - - 0.73 0.11 0.02 - - 0.01 0.03 0.09 - Isolated - - 0.15 0.71 0.04 - - 0.08 0.01 0.02 - Detected Hospitalized - - - - 0.86 - - - - 0.14 - Quarantined Susceptible - - - - - - - - - - - Quarantined Exposed - - - 1.00 - - - - - - - Isolated Recovered - - - - - - - 0.72 - 0.28 - Hospitalized - - - - - - - - 0.85 0.15 - Recovered - - - - - - - - - 1.00 test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 0 tests test-seirmixingquarantine.R... 1 tests OK test-seirmixingquarantine.R... 2 tests OK test-seirmixingquarantine.R... 3 tests OK test-seirmixingquarantine.R... 4 tests OK test-seirmixingquarantine.R... 5 tests OK test-seirmixingquarantine.R... 6 tests OK test-seirmixingquarantine.R... 7 tests OK test-seirmixingquarantine.R... 8 tests OK test-seirmixingquarantine.R... 9 tests OK test-seirmixingquarantine.R... 10 tests OK test-seirmixingquarantine.R... 11 tests OK test-seirmixingquarantine.R... 12 tests OK test-seirmixingquarantine.R... 13 tests OK test-seirmixingquarantine.R... 14 tests OK test-seirmixingquarantine.R... 15 tests OK test-seirmixingquarantine.R... 16 tests OK test-seirmixingquarantine.R... 17 tests OK test-seirmixingquarantine.R... 18 tests OK test-seirmixingquarantine.R... 19 tests OK 96ms test-sir.R.................... 1 tests OK test-sir.R.................... 2 tests OK test-sir.R.................... 3 tests OK test-sir.R.................... 4 tests OK test-sir.R.................... 5 tests OK test-sir.R.................... 6 tests OK test-sir.R.................... 7 tests OK test-sir.R.................... 8 tests OK test-sir.R.................... 9 tests OK test-sir.R.................... 9 tests OK test-sir.R.................... 9 tests OK test-sir.R.................... 10 tests OK test-sir.R.................... 10 tests OK test-sir.R.................... 10 tests OK test-sir.R.................... 11 tests OK test-sir.R.................... 11 tests OK test-sir.R.................... 11 tests OK test-sir.R.................... 11 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 12 tests OK test-sir.R.................... 13 tests OK test-sir.R.................... 14 tests OK test-sir.R.................... 15 tests OK test-sir.R.................... 16 tests OK test-sir.R.................... 17 tests OK test-sir.R.................... 18 tests OK test-sir.R.................... 19 tests OK test-sir.R.................... 20 tests OK 0.7s test-sirconn.R................ 1 tests OK test-sirconn.R................ 2 tests OK test-sirconn.R................ 3 tests OK test-sirconn.R................ 4 tests OK test-sirconn.R................ 5 tests OK test-sirconn.R................ 6 tests OK test-sirconn.R................ 7 tests OK test-sirconn.R................ 8 tests OK test-sirconn.R................ 9 tests OK test-sirconn.R................ 9 tests OK test-sirconn.R................ 9 tests OK test-sirconn.R................ 9 tests OK test-sirconn.R................ 10 tests OK test-sirconn.R................ 10 tests OK test-sirconn.R................ 10 tests OK test-sirconn.R................ 10 tests OK test-sirconn.R................ 11 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 12 tests OK test-sirconn.R................ 13 tests OK test-sirconn.R................ 14 tests OK test-sirconn.R................ 15 tests OK test-sirconn.R................ 16 tests OK test-sirconn.R................ 17 tests OK test-sirconn.R................ 18 tests OK 82ms test-sird.R................... 1 tests OK test-sird.R................... 2 tests OK test-sird.R................... 3 tests OK test-sird.R................... 4 tests OK test-sird.R................... 5 tests OK test-sird.R................... 6 tests OK test-sird.R................... 7 tests OK test-sird.R................... 8 tests OK test-sird.R................... 9 tests OK test-sird.R................... 10 tests OK test-sird.R................... 10 tests OK test-sird.R................... 11 tests OK test-sird.R................... 12 tests OK test-sird.R................... 13 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 14 tests OK test-sird.R................... 15 tests OK test-sird.R................... 16 tests OK test-sird.R................... 17 tests OK test-sird.R................... 18 tests OK test-sird.R................... 19 tests OK 31ms test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 0 tests test-sirdconn.R............... 1 tests OK test-sirdconn.R............... 2 tests OK test-sirdconn.R............... 3 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 4 tests OK test-sirdconn.R............... 5 tests OK test-sirdconn.R............... 6 tests OK test-sirdconn.R............... 7 tests OK test-sirdconn.R............... 8 tests OK test-sirdconn.R............... 9 tests OK test-sirdconn.R............... 10 tests OK test-sirdconn.R............... 11 tests OK 6ms test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 0 tests test-sirlogit.R............... 1 tests OK test-sirlogit.R............... 2 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 3 tests OK test-sirlogit.R............... 4 tests OK test-sirlogit.R............... 5 tests OK test-sirlogit.R............... 6 tests OK test-sirlogit.R............... 7 tests OK test-sirlogit.R............... 8 tests OK test-sirlogit.R............... 9 tests OK test-sirlogit.R............... 10 tests OK test-sirlogit.R............... 11 tests OK test-sirlogit.R............... 12 tests OK 21ms test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 0 tests test-sirmixing.R.............. 1 tests OK test-sirmixing.R.............. 2 tests OK test-sirmixing.R.............. 3 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 4 tests OK test-sirmixing.R.............. 5 tests OK test-sirmixing.R.............. 6 tests OK test-sirmixing.R.............. 7 tests OK test-sirmixing.R.............. 8 tests OK test-sirmixing.R.............. 9 tests OK test-sirmixing.R.............. 10 tests OK test-sirmixing.R.............. 11 tests OK 7ms test-sis.R.................... 1 tests OK test-sis.R.................... 2 tests OK test-sis.R.................... 3 tests OK test-sis.R.................... 4 tests OK test-sis.R.................... 5 tests OK test-sis.R.................... 6 tests OK test-sis.R.................... 7 tests OK test-sis.R.................... 8 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 9 tests OK test-sis.R.................... 10 tests OK test-sis.R.................... 11 tests OK test-sis.R.................... 12 tests OK test-sis.R.................... 13 tests OK 0.5s test-sisd.R................... 0 tests test-sisd.R................... 0 tests test-sisd.R................... 0 tests test-sisd.R................... 0 tests test-sisd.R................... 0 tests test-sisd.R................... 1 tests OK test-sisd.R................... 2 tests OK test-sisd.R................... 3 tests OK test-sisd.R................... 4 tests OK test-sisd.R................... 4 tests OK test-sisd.R................... 4 tests OK test-sisd.R................... 4 tests OK test-sisd.R................... 4 tests OK test-sisd.R................... 5 tests OK test-sisd.R................... 6 tests OK test-sisd.R................... 7 tests OK test-sisd.R................... 8 tests OK test-sisd.R................... 9 tests OK 6ms test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 0 tests test-surv.R................... 1 tests OK test-surv.R................... 2 tests OK test-surv.R................... 3 tests OK test-surv.R................... 4 tests OK test-surv.R................... 4 tests OK test-surv.R................... 4 tests OK test-surv.R................... 4 tests OK test-surv.R................... 4 tests OK test-surv.R................... 5 tests OK test-surv.R................... 6 tests OK test-surv.R................... 7 tests OK test-surv.R................... 8 tests OK test-surv.R................... 9 tests OK test-surv.R................... 10 tests OK test-surv.R................... 11 tests OK test-surv.R................... 12 tests OK test-surv.R................... 13 tests OK test-surv.R................... 14 tests OK test-surv.R................... 15 tests OK test-surv.R................... 16 tests OK test-surv.R................... 17 tests OK 12ms test-tool.R................... 0 tests test-tool.R................... 1 tests OK test-tool.R................... 2 tests OK test-tool.R................... 3 tests OK test-tool.R................... 4 tests OK test-tool.R................... 5 tests OK test-tool.R................... 5 tests OK test-tool.R................... 6 tests OK test-tool.R................... 7 tests OK test-tool.R................... 8 tests OK test-tool.R................... 8 tests OK test-tool.R................... 9 tests OK test-tool.R................... 10 tests OK test-tool.R................... 11 tests OK test-tool.R................... 12 tests OK test-tool.R................... 13 tests OK test-tool.R................... 14 tests OK test-tool.R................... 15 tests OK test-tool.R................... 16 tests OK test-tool.R................... 17 tests OK test-tool.R................... 18 tests OK 9ms test-virus.R.................. 1 tests OK test-virus.R.................. 2 tests OK test-virus.R.................. 3 tests OK test-virus.R.................. 4 tests OK 3ms All ok, 507 results (31.1s) > > proc.time() user system elapsed 29.82 1.42 31.40