R Under development (unstable) (2024-04-23 r86473 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(epigrowthfit)
> options(warn = 2L, error = if (interactive()) recover)
> 
> o.1  <- egf_cache(       "egf-1.rds")
> o.1f <- egf_cache("fitted-egf-1.rds")
> 
> 
> ## object ##############################################################
> 
> o.1f.e <- data.frame(top = gl(2L, 20L, labels = c("log(r)", "log(c0)")),
+                      ts = gl(10L, 2L, 40L, labels = LETTERS[1:10]),
+                      window = gl(20L, 1L, 40L, labels = sprintf("window_%02d", 1:20)),
+                      value = as.double(o.1[["tmb_out"]][["env"]][[".__egf__."]][["adreport"]][["value"]]),
+                      se = as.double(o.1[["tmb_out"]][["env"]][[".__egf__."]][["adreport"]][["sd"]]))
> attr(o.1f.e, "se") <- TRUE
> attr(o.1f.e, "ns") <- 20L
> attr(o.1f.e, "nt") <- 2L
> class(o.1f.e) <- c("fitted.egf", "data.frame")
> stopifnot(identical(o.1f, o.1f.e))
> 
> 
> ## confint #############################################################
> 
> o.1fc <- confint(o.1f, level = 0.95, class = TRUE)
> o.1fc.e <- o.1f[, c("top", "ts", "window", "value")]
> o.1fc.e[["ci"]] <-
+ 	`dimnames<-`(epigrowthfit:::wald(o.1f[["value"]], o.1f[["se"]],
+ 	                                 level = 0.95),
+ 	             list(NULL, c("2.5 %", "97.5 %")))
> attr(o.1fc.e, "level") <- 0.95
> class(o.1fc.e) <- c("confint.egf", "data.frame")
> stopifnot(identical(o.1fc, o.1fc.e))
> 
> proc.time()
   user  system elapsed 
   1.42    0.20    1.56