installing dependencies ‘animation’, ‘BiocParallel’, ‘crosstalk’, ‘data.table’, ‘DT’, ‘igraph’, ‘knitr’, ‘mixtools’, ‘MSnbase’, ‘plotly’, ‘RColorBrewer’, ‘Rdisop’, ‘rmarkdown’, ‘shiny’, ‘testthat’, ‘xcms’ also installing the dependencies ‘BiocBaseUtils’, ‘sys’, ‘formatR’, ‘colorspace’, ‘matrixStats’, ‘XVector’, ‘UCSC.utils’, ‘GenomeInfoDbData’, ‘abind’, ‘SparseArray’, ‘MultiAssayExperiment’, ‘AnnotationFilter’, ‘reshape2’, ‘statmod’, ‘askpass’, ‘stringi’, ‘utf8’, ‘rappdirs’, ‘lambda.r’, ‘futile.options’, ‘curl’, ‘farver’, ‘labeling’, ‘munsell’, ‘fs’, ‘pkgbuild’, ‘rprojroot’, ‘diffobj’, ‘ncdf4’, ‘Rhdf5lib’, ‘MatrixGenerics’, ‘GenomicRanges’, ‘GenomeInfoDb’, ‘S4Arrays’, ‘DelayedArray’, ‘clue’, ‘QFeatures’, ‘DBI’, ‘hms’, ‘prettyunits’, ‘limma’, ‘affyio’, ‘BiocManager’, ‘preprocessCore’, ‘zlibbioc’, ‘XML’, ‘doParallel’, ‘foreach’, ‘iterators’, ‘gtable’, ‘isoband’, ‘openssl’, ‘stringr’, ‘tidyselect’, ‘generics’, ‘pillar’, ‘fansi’, ‘memoise’, ‘sass’, ‘Rcpp’, ‘futile.logger’, ‘snow’, ‘BH’, ‘cpp11’, ‘magick’, ‘kernlab’, ‘scales’, ‘segmented’, ‘cli’, ‘lifecycle’, ‘magrittr’, ‘pkgconfig’, ‘rlang’, ‘vctrs’, ‘evaluate’, ‘highr’, ‘xfun’, ‘yaml’, ‘brio’, ‘callr’, ‘desc’, ‘digest’, ‘jsonlite’, ‘pkgload’, ‘praise’, ‘processx’, ‘ps’, ‘R6’, ‘waldo’, ‘withr’, ‘mzR’, ‘Biobase’, ‘BiocGenerics’, ‘ProtGenerics’, ‘MassSpecWavelet’, ‘S4Vectors’, ‘IRanges’, ‘SummarizedExperiment’, ‘MsCoreUtils’, ‘MsFeatures’, ‘MsExperiment’, ‘Spectra’, ‘progress’, ‘MetaboCoreUtils’, ‘PSMatch’, ‘plyr’, ‘vsn’, ‘affy’, ‘impute’, ‘pcaMethods’, ‘MALDIquant’, ‘mzID’, ‘ggplot2’, ‘httr’, ‘viridisLite’, ‘base64enc’, ‘htmltools’, ‘htmlwidgets’, ‘tidyr’, ‘dplyr’, ‘tibble’, ‘lazyeval’, ‘purrr’, ‘promises’, ‘httpuv’, ‘mime’, ‘xtable’, ‘fontawesome’, ‘sourcetools’, ‘later’, ‘crayon’, ‘fastmap’, ‘commonmark’, ‘glue’, ‘bslib’, ‘cachem’, ‘jquerylib’, ‘tinytex’ begin installing package ‘BiocBaseUtils’ begin installing package ‘sys’ begin installing package ‘formatR’ begin installing package ‘colorspace’ begin installing package ‘matrixStats’ begin installing package ‘abind’ begin installing package ‘GenomeInfoDbData’ begin installing package ‘statmod’ begin installing package ‘stringi’ begin installing package ‘utf8’ begin installing package ‘rappdirs’ begin installing package ‘futile.options’ begin installing package ‘curl’ begin installing package ‘farver’ begin installing package ‘fs’ begin installing package ‘labeling’ begin installing package ‘rprojroot’ begin installing package ‘ncdf4’ begin installing package ‘Rhdf5lib’ begin installing package ‘clue’ begin installing package ‘DBI’ begin installing package ‘prettyunits’ begin installing package ‘BiocManager’ begin installing package ‘preprocessCore’ begin installing package ‘zlibbioc’ begin installing package ‘XML’ begin installing package ‘iterators’ begin installing package ‘isoband’ * installing *source* package ‘futile.options’ ... ** this is package ‘futile.options’ version ‘1.0.1’ ** package ‘futile.options’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (futile.options) begin installing package ‘generics’ * installing *source* package ‘BiocBaseUtils’ ... ** this is package ‘BiocBaseUtils’ version ‘1.8.0’ ** package ‘BiocBaseUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocBaseUtils) begin installing package ‘fansi’ * installing *source* package ‘sys’ ... ** this is package ‘sys’ version ‘3.4.3’ ** package ‘sys’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZRCK5y/R.INSTALL35befe5114421a/sys/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c exec.c -o exec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sys.so exec.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZRCK5y/R.INSTALL35befe5114421a/sys/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sys/00new/sys/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sys) begin installing package ‘Rcpp’ * installing *source* package ‘rappdirs’ ... ** this is package ‘rappdirs’ version ‘0.3.3’ ** package ‘rappdirs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaErShE/R.INSTALL35bf0f7d8262eb/rappdirs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c win-path.c -o win-path.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rappdirs.so init.o win-path.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaErShE/R.INSTALL35bf0f7d8262eb/rappdirs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rappdirs/00new/rappdirs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rappdirs) begin installing package ‘snow’ * installing *source* package ‘zlibbioc’ ... ** this is package ‘zlibbioc’ version ‘1.52.0’ ** package ‘zlibbioc’ successfully unpacked and MD5 sums checked ** using staged installation configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFflY50/R.INSTALL35bf4816ba4cf5/zlibbioc/src' mkdir -p "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-zlibbioc/00new/zlibbioc/include" clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_zlibbioc.c -o R_init_zlibbioc.o R_init_zlibbioc.c:1:20: warning: ISO C requires a translation unit to contain at least one declaration [-Wempty-translation-unit] 1 | /* do not remove */ | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o zlibbioc.so R_init_zlibbioc.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFflY50/R.INSTALL35bf4816ba4cf5/zlibbioc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-zlibbioc/00new/zlibbioc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in fun(libname, pkgname) : Package 'zlibbioc' is deprecated and will be removed from Bioconductor version 3.22 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning in fun(libname, pkgname) : Package 'zlibbioc' is deprecated and will be removed from Bioconductor version 3.22 ** testing if installed package keeps a record of temporary installation path * DONE (zlibbioc) begin installing package ‘BH’ * installing *source* package ‘GenomeInfoDbData’ ... ** this is package ‘GenomeInfoDbData’ version ‘1.2.13’ ** using staged installation ** data ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomeInfoDbData) begin installing package ‘cpp11’ * installing *source* package ‘prettyunits’ ... ** this is package ‘prettyunits’ version ‘1.2.0’ ** package ‘prettyunits’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prettyunits) begin installing package ‘kernlab’ * installing *source* package ‘abind’ ... ** this is package ‘abind’ version ‘1.4-8’ ** package ‘abind’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abind) begin installing package ‘segmented’ * installing *source* package ‘iterators’ ... ** this is package ‘iterators’ version ‘1.0.14’ ** package ‘iterators’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iterators) begin installing package ‘cli’ * installing *source* package ‘labeling’ ... ** this is package ‘labeling’ version ‘0.4.3’ ** package ‘labeling’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labeling) begin installing package ‘magrittr’ * installing *source* package ‘formatR’ ... ** this is package ‘formatR’ version ‘1.14’ ** package ‘formatR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (formatR) begin installing package ‘pkgconfig’ * installing *source* package ‘rprojroot’ ... ** this is package ‘rprojroot’ version ‘2.0.4’ ** package ‘rprojroot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rprojroot) begin installing package ‘rlang’ * installing *source* package ‘BiocManager’ ... ** this is package ‘BiocManager’ version ‘1.30.25’ ** package ‘BiocManager’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocManager) begin installing package ‘evaluate’ * installing *source* package ‘generics’ ... ** this is package ‘generics’ version ‘0.1.3’ ** package ‘generics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) begin installing package ‘xfun’ * installing *source* package ‘pkgconfig’ ... ** this is package ‘pkgconfig’ version ‘2.0.3’ ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgconfig) begin installing package ‘yaml’ * installing *source* package ‘utf8’ ... ** this is package ‘utf8’ version ‘1.2.4’ ** package ‘utf8’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAkJalu/R.INSTALL35bf0b1eab3b1c/utf8/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c as_utf8.c -o as_utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c bytes.c -o bytes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c context.c -o context.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render.c -o render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render_table.c -o render_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c string.c -o string.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c text.c -o text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_encode.c -o utf8_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_format.c -o utf8_format.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_normalize.c -o utf8_normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_valid.c -o utf8_valid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_width.c -o utf8_width.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c util.c -o util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/array.c -o utf8lite/src/array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/char.c -o utf8lite/src/char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/encode.c -o utf8lite/src/encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/error.c -o utf8lite/src/error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/escape.c -o utf8lite/src/escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graph.c -o utf8lite/src/graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/render.c -o utf8lite/src/render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/text.c -o utf8lite/src/text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAkJalu/R.INSTALL35bf0b1eab3b1c/utf8/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-utf8/00new/utf8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (utf8) begin installing package ‘brio’ * installing *source* package ‘cpp11’ ... ** this is package ‘cpp11’ version ‘0.5.1’ ** package ‘cpp11’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) begin installing package ‘digest’ * installing *source* package ‘magrittr’ ... ** this is package ‘magrittr’ version ‘2.0.3’ ** package ‘magrittr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYiee00/R.INSTALL35cfc4555b3fee/magrittr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pipe.c -o pipe.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o magrittr.so pipe.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYiee00/R.INSTALL35cfc4555b3fee/magrittr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) begin installing package ‘jsonlite’ * installing *source* package ‘snow’ ... ** this is package ‘snow’ version ‘0.4-4’ ** package ‘snow’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (snow) begin installing package ‘praise’ * installing *source* package ‘curl’ ... ** this is package ‘curl’ version ‘6.1.0’ ** package ‘curl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 Using PKG_LIBS=-lcurl Found recent recent version of libcurl ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6UNIGZ/R.INSTALL35bf204f1f6667/curl/src' rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o findport.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o options.o reflist.o split.o ssl.o typechecking.o urlparser.o utils.o version.o winidn.o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callbacks.c -o callbacks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c curl.c -o curl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c download.c -o download.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape.c -o escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fetch.c -o fetch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c findport.c -o findport.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c form.c -o form.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c getdate.c -o getdate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c handle.c -o handle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ieproxy.c -o ieproxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interrupt.c -o interrupt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c multi.c -o multi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nslookup.c -o nslookup.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c options.c -o options.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c reflist.c -o reflist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typechecking.c -o typechecking.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c urlparser.c -o urlparser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c winidn.c -o winidn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o curl.so callbacks.o curl.o download.o escape.o fetch.o findport.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o options.o reflist.o split.o ssl.o typechecking.o urlparser.o utils.o version.o winidn.o writer.o -lcurl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6UNIGZ/R.INSTALL35bf204f1f6667/curl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-curl/00new/curl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (curl) begin installing package ‘ps’ * installing *source* package ‘evaluate’ ... ** this is package ‘evaluate’ version ‘1.0.3’ ** package ‘evaluate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) begin installing package ‘R6’ * installing *source* package ‘statmod’ ... ** this is package ‘statmod’ version ‘1.5.0’ ** package ‘statmod’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBayBHB/R.INSTALL35bf1a740c90a0/statmod/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expectedDeviance.c -o expectedDeviance.o flang-new-19 -fpic -g -O2 -c gaussq2.f -o gaussq2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o statmod.so expectedDeviance.o gaussq2.o init.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBayBHB/R.INSTALL35bf1a740c90a0/statmod/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-statmod/00new/statmod/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statmod) begin installing package ‘withr’ * installing *source* package ‘praise’ ... ** this is package ‘praise’ version ‘1.0.0’ ** package ‘praise’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praise) begin installing package ‘BiocGenerics’ * installing *source* package ‘isoband’ ... ** this is package ‘isoband’ version ‘0.2.7’ ** package ‘isoband’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzbcpFW/R.INSTALL35bf441b84386c/isoband/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clip-lines.cpp -o clip-lines.o clip-lines.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c isoband.cpp -o isoband.o isoband.cpp:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c polygon.cpp -o polygon.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c separate-polygons.cpp -o separate-polygons.o separate-polygons.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-clip-lines.cpp -o test-clip-lines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-runner.cpp -o test-runner.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-separate-polygons.cpp -o test-separate-polygons.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzbcpFW/R.INSTALL35bf441b84386c/isoband/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-isoband/00new/isoband/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (isoband) begin installing package ‘ProtGenerics’ * installing *source* package ‘brio’ ... ** this is package ‘brio’ version ‘1.1.5’ ** package ‘brio’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCJMT2Q/R.INSTALL35d7d8388fca08/brio/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c brio.c -o brio.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c file_line_endings.c -o file_line_endings.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_file.c -o read_file.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_file_raw.c -o read_file_raw.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_lines.c -o read_lines.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_file.c -o write_file.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_file_raw.c -o write_file_raw.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write_lines.c -o write_lines.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_file_raw.o write_lines.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCJMT2Q/R.INSTALL35d7d8388fca08/brio/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-brio/00new/brio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brio) begin installing package ‘MassSpecWavelet’ * installing *source* package ‘fansi’ ... ** this is package ‘fansi’ version ‘1.0.6’ ** package ‘fansi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYxv7i2/R.INSTALL35cd1d3417e97/fansi/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assumptions.c -o assumptions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c carry.c -o carry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c has.c -o has.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nchar.c -o nchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c normalize.c -o normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c read.c -o read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rnchar.c -o rnchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c state.c -o state.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c strip.c -o strip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c substr.c -o substr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tabs.c -o tabs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tohtml.c -o tohtml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trimws.c -o trimws.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unhandled.c -o unhandled.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c wrap.c -o wrap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fansi.so assumptions.o carry.o has.o init.o nchar.o normalize.o read.o rnchar.o state.o strip.o substr.o tabs.o tohtml.o trimws.o unhandled.o utf8.o utils.o wrap.o write.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYxv7i2/R.INSTALL35cd1d3417e97/fansi/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fansi/00new/fansi/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fansi) begin installing package ‘impute’ * installing *source* package ‘ncdf4’ ... ** this is package ‘ncdf4’ version ‘1.23’ ** package ‘ncdf4’ successfully unpacked and MD5 sums checked ** using staged installation configure.ac: starting checking for nc-config... yes Using nc-config: nc-config Output of nc-config --all: This netCDF 4.9.2 has been built with the following features: --cc -> /usr/bin/cc --cflags -> -I/usr/include -I/usr/include/hdf5/serial --libs -> -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf --static -> -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm -lzstd -lxml2 --has-dap -> yes --has-dap2 -> yes --has-dap4 -> yes --has-nc2 -> yes --has-nc4 -> yes --has-hdf5 -> yes --has-hdf4 -> no --has-logging -> no --has-pnetcdf -> no --has-szlib -> no --has-cdf5 -> yes --has-parallel4 -> no --has-parallel -> no --has-nczarr -> yes --has-zstd -> yes --has-benchmarks -> no --has-multifilters -> no --has-stdfilters -> deflate szip zstd bz2 --has-quantize -> no --prefix -> /usr --includedir -> /usr/include --libdir -> /usr/lib/x86_64-linux-gnu --plugindir -> --version -> netCDF 4.9.2 --- netcdf.m4: about to set rpath, here is source string: >-L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf< netcdf.m4: final rpath: -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial Netcdf library version: netCDF 4.9.2 Netcdf library has version 4 interface present: yes Netcdf library was compiled with C compiler: /usr/bin/cc configure: creating ./config.status config.status: creating src/Makevars ********************** Results of ncdf4 package configure ******************* netCDF v4 CPP flags = -I/usr/include -I/usr/include/hdf5/serial netCDF v4 LD flags = -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -Wl,-O1 netCDF v4 runtime path = -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial netCDF C compiler used = /usr/bin/cc R C compiler used = clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic ****************************************************************************** checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to accept ISO C89... none needed checking whether we are using the GNU C compiler... (cached) yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... (cached) yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to accept ISO C89... (cached) none needed netcdf cc arg1: /usr/bin/cc R cc arg1: clang-19 R_IS_GCC: 1 R_IS_CLANG: 1 NETCDF_IS_GCC: 1 NETCDF_IS_CLANG: 0 emit_warning: 0 ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8zhqQH/R.INSTALL35bf345429e268/ncdf4/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include -I/usr/include/hdf5/serial -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ncdf.c -o ncdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ncdf4.so ncdf.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -Wl,-O1 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8zhqQH/R.INSTALL35bf345429e268/ncdf4/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ncdf4/00new/ncdf4/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ncdf4) begin installing package ‘MALDIquant’ * installing *source* package ‘R6’ ... ** this is package ‘R6’ version ‘2.5.1’ ** package ‘R6’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (R6) begin installing package ‘viridisLite’ * installing *source* package ‘DBI’ ... ** this is package ‘DBI’ version ‘1.2.3’ ** package ‘DBI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DBI) begin installing package ‘base64enc’ * installing *source* package ‘withr’ ... ** this is package ‘withr’ version ‘3.0.2’ ** package ‘withr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) begin installing package ‘lazyeval’ * installing *source* package ‘preprocessCore’ ... ** this is package ‘preprocessCore’ version ‘1.68.0’ ** package ‘preprocessCore’ successfully unpacked and MD5 sums checked ** using staged installation 'config' variable 'CPP' is defunct checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to accept ISO C89... none needed checking how to run the C preprocessor... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -E checking for library containing pthread_create... none required checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking if PTHREAD_STACK_MIN is defined... yes checking if R is using flexiblas... flexiblas not found. preprocessCore threading will not be disabled configure: Enabling threading for preprocessCore configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqGBRlW/R.INSTALL35bf4245689df4/preprocessCore/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_colSummarize.c -o R_colSummarize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_plmd_interfaces.c -o R_plmd_interfaces.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_plmr_interfaces.c -o R_plmr_interfaces.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_rlm_interfaces.c -o R_rlm_interfaces.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_subColSummarize.c -o R_subColSummarize.o R_subColSummarize.c:109:21: warning: unused variable 'buffer' [-Wunused-variable] 109 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:111:8: warning: unused variable 'cur_rows' [-Wunused-variable] 111 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:115:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 115 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:117:9: warning: unused variable 'j' [-Wunused-variable] 117 | int i,j; | ^ R_subColSummarize.c:282:21: warning: unused variable 'buffer' [-Wunused-variable] 282 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:284:8: warning: unused variable 'cur_rows' [-Wunused-variable] 284 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:288:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 288 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:290:9: warning: unused variable 'j' [-Wunused-variable] 290 | int i,j; | ^ R_subColSummarize.c:458:21: warning: unused variable 'buffer' [-Wunused-variable] 458 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:460:8: warning: unused variable 'cur_rows' [-Wunused-variable] 460 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:464:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 464 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:466:9: warning: unused variable 'j' [-Wunused-variable] 466 | int i,j; | ^ R_subColSummarize.c:635:21: warning: unused variable 'buffer' [-Wunused-variable] 635 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:637:8: warning: unused variable 'cur_rows' [-Wunused-variable] 637 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:641:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 641 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:643:9: warning: unused variable 'j' [-Wunused-variable] 643 | int i,j; | ^ R_subColSummarize.c:811:21: warning: unused variable 'buffer' [-Wunused-variable] 811 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:813:8: warning: unused variable 'cur_rows' [-Wunused-variable] 813 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:817:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 817 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:819:9: warning: unused variable 'j' [-Wunused-variable] 819 | int i,j; | ^ R_subColSummarize.c:988:21: warning: unused variable 'buffer' [-Wunused-variable] 988 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:990:8: warning: unused variable 'cur_rows' [-Wunused-variable] 990 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:994:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 994 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:996:9: warning: unused variable 'j' [-Wunused-variable] 996 | int i,j; | ^ R_subColSummarize.c:1163:21: warning: unused variable 'buffer' [-Wunused-variable] 1163 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:1165:8: warning: unused variable 'cur_rows' [-Wunused-variable] 1165 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:1169:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 1169 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:1171:9: warning: unused variable 'j' [-Wunused-variable] 1171 | int i,j; | ^ R_subColSummarize.c:1337:21: warning: unused variable 'buffer' [-Wunused-variable] 1337 | double *results, *buffer; | ^~~~~~ R_subColSummarize.c:1339:8: warning: unused variable 'cur_rows' [-Wunused-variable] 1339 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:1343:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 1343 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:1345:9: warning: unused variable 'j' [-Wunused-variable] 1345 | int i,j; | ^ R_subColSummarize.c:1516:21: warning: variable 'buffer' set but not used [-Wunused-but-set-variable] 1516 | double *results, *buffer, *buffer2; | ^ R_subColSummarize.c:1516:30: warning: variable 'buffer2' set but not used [-Wunused-but-set-variable] 1516 | double *results, *buffer, *buffer2; | ^ R_subColSummarize.c:1518:8: warning: unused variable 'cur_rows' [-Wunused-variable] 1518 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:1522:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 1522 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:1524:9: warning: unused variable 'j' [-Wunused-variable] 1524 | int i,j; | ^ R_subColSummarize.c:1696:21: warning: unused variable 'buffer' [-Wunused-variable] 1696 | double *results, *buffer, *buffer2; | ^~~~~~ R_subColSummarize.c:1696:30: warning: unused variable 'buffer2' [-Wunused-variable] 1696 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subColSummarize.c:1698:8: warning: unused variable 'cur_rows' [-Wunused-variable] 1698 | int *cur_rows; | ^~~~~~~~ R_subColSummarize.c:1702:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 1702 | int ncur_rows; | ^~~~~~~~~ R_subColSummarize.c:1704:9: warning: unused variable 'j' [-Wunused-variable] 1704 | int i,j; | ^ R_subColSummarize.c:1660:14: warning: unused function 'subColSummarize_medianpolish_group' [-Wunused-function] 1660 | static void *subColSummarize_medianpolish_group(void *data){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c R_subrcModel_interfaces.c -o R_subrcModel_interfaces.o R_subrcModel_interfaces.c:75:11: warning: unused variable 'buffer' [-Wunused-variable] 75 | double *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:75:20: warning: unused variable 'buffer2' [-Wunused-variable] 75 | double *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:90:11: warning: unused variable 'weights' [-Wunused-variable] 90 | double *weights; | ^~~~~~~ R_subrcModel_interfaces.c:91:11: warning: unused variable 'se' [-Wunused-variable] 91 | double *se; | ^~ R_subrcModel_interfaces.c:165:11: warning: unused variable 'results' [-Wunused-variable] 165 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:165:21: warning: unused variable 'buffer' [-Wunused-variable] 165 | double *results, *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:165:30: warning: unused variable 'buffer2' [-Wunused-variable] 165 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:167:8: warning: unused variable 'cur_rows' [-Wunused-variable] 167 | int *cur_rows; | ^~~~~~~~ R_subrcModel_interfaces.c:171:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 171 | int ncur_rows; | ^~~~~~~~~ R_subrcModel_interfaces.c:173:9: warning: unused variable 'j' [-Wunused-variable] 173 | int i,j; | ^ R_subrcModel_interfaces.c:377:11: warning: unused variable 'buffer' [-Wunused-variable] 377 | double *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:377:20: warning: unused variable 'buffer2' [-Wunused-variable] 377 | double *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:398:10: warning: unused variable 'scale' [-Wunused-variable] 398 | double scale=-1.0; | ^~~~~ R_subrcModel_interfaces.c:485:11: warning: unused variable 'results' [-Wunused-variable] 485 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:485:21: warning: unused variable 'buffer' [-Wunused-variable] 485 | double *results, *buffer, *buffer2; | ^~~~~~ R_subrcModel_interfaces.c:485:30: warning: unused variable 'buffer2' [-Wunused-variable] 485 | double *results, *buffer, *buffer2; | ^~~~~~~ R_subrcModel_interfaces.c:487:8: warning: unused variable 'cur_rows' [-Wunused-variable] 487 | int *cur_rows; | ^~~~~~~~ R_subrcModel_interfaces.c:491:7: warning: unused variable 'ncur_rows' [-Wunused-variable] 491 | int ncur_rows; | ^~~~~~~~~ R_subrcModel_interfaces.c:493:9: warning: unused variable 'j' [-Wunused-variable] 493 | int i,j; | ^ 19 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c avg.c -o avg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c avg_log.c -o avg_log.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c biweight.c -o biweight.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c init_package.c -o init_package.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c lm.c -o lm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c log_avg.c -o log_avg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c log_median.c -o log_median.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c matrix_functions.c -o matrix_functions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c median.c -o median.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c median_log.c -o median_log.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c medianpolish.c -o medianpolish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c plmd.c -o plmd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c plmr.c -o plmr.o plmr.c:82:13: warning: unused function 'XTWY_R' [-Wunused-function] 82 | static void XTWY_R(int *rows, int *cols, double *out_weights, double *y,double *xtwy){ | ^~~~~~ plmr.c:152:13: warning: unused function 'XTWX_R' [-Wunused-function] 152 | static void XTWX_R(int *rows, int *cols, double *out_weights, double *xtwx){ | ^~~~~~ plmr.c:279:13: warning: unused function 'XTWX_R_inv' [-Wunused-function] 279 | static void XTWX_R_inv(int *rows, int *cols, double *xtwx){ | ^~~~~~~~~~ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c psi_fns.c -o psi_fns.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c qnorm.c -o qnorm.o qnorm.c:596:9: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 595 | error("ERROR; return code from pthread_join(thread #%d) is %d, exit status for thread was %d\n", | ~~ | %zu 596 | i, returnCode, *((int *) status)); | ^ qnorm.c:617:9: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 616 | error("ERROR; return code from pthread_join(thread #%d) is %d, exit status for thread was %d\n", | ~~ | %zu 617 | i, returnCode, *((int *) status)); | ^ qnorm.c:2005:9: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 2004 | error("ERROR; return code from pthread_join(thread #%d) is %d, exit status for thread was %d\n", | ~~ | %zu 2005 | i, returnCode, *((int *) status)); | ^ qnorm.c:1905:12: warning: unused variable 'j' [-Wunused-variable] 1905 | size_t i,j,row_mean_ind; | ^ qnorm.c:1910:7: warning: unused variable 'non_na' [-Wunused-variable] 1910 | int non_na; | ^~~~~~ qnorm.c:2102:14: warning: variable 'target_rows' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 2102 | } else if (isMatrix(target)){ | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:970:19: note: expanded from macro 'isMatrix' 970 | #define isMatrix Rf_isMatrix | ^ qnorm.c:2115:55: note: uninitialized use occurs here 2115 | qnorm_c_using_target_l(Xptr, rows, cols ,targetptr, target_rows); | ^~~~~~~~~~~ qnorm.c:2102:10: note: remove the 'if' if its condition is always true 2102 | } else if (isMatrix(target)){ | ^~~~~~~~~~~~~~~~~~~~~ qnorm.c:2083:21: note: initialize the variable 'target_rows' to silence this warning 2083 | size_t target_rows, target_cols; | ^ | = 0 qnorm.c:2605:9: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 2604 | error("ERROR; return code from pthread_join(thread #%d) is %d, exit status for thread was %d\n", | ~~ | %zu 2605 | i, returnCode, *((int *) status)); | ^ qnorm.c:2504:12: warning: unused variable 'j' [-Wunused-variable] 2504 | size_t i,j,row_mean_ind; | ^ qnorm.c:2509:7: warning: unused variable 'non_na' [-Wunused-variable] 2509 | int non_na; | ^~~~~~ qnorm.c:2725:14: warning: variable 'ind' set but not used [-Wunused-but-set-variable] 2725 | size_t i,j,ind,target_ind; | ^ qnorm.c:2823:11: warning: unused variable 'sample_percentiles' [-Wunused-variable] 2823 | double *sample_percentiles; | ^~~~~~~~~~~~~~~~~~ qnorm.c:2824:11: warning: unused variable 'datvec' [-Wunused-variable] 2824 | double *datvec; | ^~~~~~ qnorm.c:2957:12: warning: unused variable 'j' [-Wunused-variable] 2957 | size_t i,j,ind,target_ind; | ^ qnorm.c:2957:14: warning: unused variable 'ind' [-Wunused-variable] 2957 | size_t i,j,ind,target_ind; | ^~~ qnorm.c:2957:18: warning: unused variable 'target_ind' [-Wunused-variable] 2957 | size_t i,j,ind,target_ind; | ^~~~~~~~~~ qnorm.c:2959:14: warning: unused variable 'dimat' [-Wunused-variable] 2959 | dataitem **dimat; | ^~~~~ qnorm.c:2961:11: warning: unused variable 'row_mean' [-Wunused-variable] 2961 | double *row_mean = target; | ^~~~~~~~ qnorm.c:2963:11: warning: unused variable 'ranks' [-Wunused-variable] 2963 | double *ranks = (double *)R_Calloc((rows),double); | ^~~~~ qnorm.c:2964:10: warning: unused variable 'samplepercentile' [-Wunused-variable] 2964 | double samplepercentile; | ^~~~~~~~~~~~~~~~ qnorm.c:2965:10: warning: unused variable 'target_ind_double' [-Wunused-variable] 2965 | double target_ind_double,target_ind_double_floor; | ^~~~~~~~~~~~~~~~~ qnorm.c:2965:28: warning: unused variable 'target_ind_double_floor' [-Wunused-variable] 2965 | double target_ind_double,target_ind_double_floor; | ^~~~~~~~~~~~~~~~~~~~~~~ qnorm.c:2967:7: warning: unused variable 'targetnon_na' [-Wunused-variable] 2967 | int targetnon_na = targetrows; | ^~~~~~~~~~~~ qnorm.c:2968:7: warning: unused variable 'non_na' [-Wunused-variable] 2968 | int non_na = 0; | ^~~~~~ qnorm.c:2972:11: warning: unused variable 'sample_percentiles' [-Wunused-variable] 2972 | double *sample_percentiles; | ^~~~~~~~~~~~~~~~~~ qnorm.c:2973:11: warning: unused variable 'datvec' [-Wunused-variable] 2973 | double *datvec; | ^~~~~~ qnorm.c:3228:14: warning: variable 'target_rows' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 3228 | } else if (isMatrix(target)){ | ^~~~~~~~~~~~~~~~ /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:970:19: note: expanded from macro 'isMatrix' 970 | #define isMatrix Rf_isMatrix | ^ qnorm.c:3242:77: note: uninitialized use occurs here 3242 | qnorm_c_using_target_via_subset_l(Xptr, rows, cols, subsetptr, targetptr, target_rows); | ^~~~~~~~~~~ qnorm.c:3228:10: note: remove the 'if' if its condition is always true 3228 | } else if (isMatrix(target)){ | ^~~~~~~~~~~~~~~~~~~~~ qnorm.c:3209:21: note: initialize the variable 'target_rows' to silence this warning 3209 | size_t target_rows, target_cols; | ^ | = 0 26 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c rlm.c -o rlm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c rlm_anova.c -o rlm_anova.o rlm_anova.c:1235:10: warning: unused variable 'endprobe' [-Wunused-variable] 1235 | double endprobe; | ^~~~~~~~ rlm_anova.c:1414:10: warning: unused variable 'k1' [-Wunused-variable] 1414 | double k1 = psi_k; /* was 1.345; */ | ^~ rlm_anova.c:1415:10: warning: unused variable 'sumpsi2' [-Wunused-variable] 1415 | double sumpsi2=0.0; /* sum of psi(r_i)^2 */ | ^~~~~~~ rlm_anova.c:1417:10: warning: unused variable 'sumderivpsi' [-Wunused-variable] 1417 | double sumderivpsi=0.0; /* sum of psi'(r_i) */ | ^~~~~~~~~~~ rlm_anova.c:1418:10: warning: unused variable 'Kappa' [-Wunused-variable] 1418 | double Kappa=0.0; /* A correction factor */ | ^~~~~ rlm_anova.c:1419:10: warning: unused variable 'scale' [-Wunused-variable] 1419 | double scale=0.0; | ^~~~~ rlm_anova.c:1426:10: warning: unused variable 'vs' [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^~ rlm_anova.c:1426:17: warning: unused variable 'm' [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^ rlm_anova.c:1426:19: warning: unused variable 'varderivpsi' [-Wunused-variable] 1426 | double vs=0.0,m,varderivpsi=0.0; | ^~~~~~~~~~~ rlm_anova.c:1505:10: warning: unused variable 'endprobe' [-Wunused-variable] 1505 | double endprobe; | ^~~~~~~~ 10 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c rlm_se.c -o rlm_se.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c rma_background4.c -o rma_background4.o rma_background4.c:354:10: warning: unused variable 'j' [-Wunused-variable] 354 | size_t j; | ^ rma_background4.c:355:10: warning: unused variable 'param' [-Wunused-variable] 355 | double param[3]; | ^~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c rma_common.c -o rma_common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_STDLIB_H=1 -DUSE_PTHREADS=1 -fpic -g -O3 -Wall -pedantic -c weightedkerneldensity.c -o weightedkerneldensity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o preprocessCore.so R_colSummarize.o R_plmd_interfaces.o R_plmr_interfaces.o R_rlm_interfaces.o R_subColSummarize.o R_subrcModel_interfaces.o avg.o avg_log.o biweight.o init_package.o lm.o log_avg.o log_median.o matrix_functions.o median.o median_log.o medianpolish.o plmd.o plmr.o psi_fns.o qnorm.o rlm.o rlm_anova.o rlm_se.o rma_background4.o rma_common.o weightedkerneldensity.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqGBRlW/R.INSTALL35bf4245689df4/preprocessCore/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-preprocessCore/00new/preprocessCore/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (preprocessCore) begin installing package ‘mime’ * installing *source* package ‘impute’ ... ** this is package ‘impute’ version ‘1.80.0’ ** package ‘impute’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFcaWxW/R.INSTALL35e220372b61e3/impute/src' flang-new-19 -fpic -g -O2 -c knnimpute.f -o knnimpute.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o impute.so knnimpute.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFcaWxW/R.INSTALL35e220372b61e3/impute/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-impute/00new/impute/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (impute) begin installing package ‘xtable’ * installing *source* package ‘viridisLite’ ... ** this is package ‘viridisLite’ version ‘0.4.2’ ** package ‘viridisLite’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridisLite) begin installing package ‘sourcetools’ * installing *source* package ‘clue’ ... ** this is package ‘clue’ version ‘0.3-66’ ** package ‘clue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOpEPiO/R.INSTALL35bf3a77c31144/clue/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c assignment.c -o assignment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clue.c -o clue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lsap.c -o lsap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c trees.c -o trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o clue.so assignment.o clue.o init.o lsap.o trees.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOpEPiO/R.INSTALL35bf3a77c31144/clue/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-clue/00new/clue/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clue) begin installing package ‘crayon’ * installing *source* package ‘jsonlite’ ... ** this is package ‘jsonlite’ version ‘1.8.9’ ** package ‘jsonlite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp05u08k/R.INSTALL35d7e6442b057e/jsonlite/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_array.c -o collapse_array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_object.c -o collapse_object.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_pretty.c -o collapse_pretty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape_chars.c -o escape_chars.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c integer64_to_na.c -o integer64_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_datelist.c -o is_datelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_recordlist.c -o is_recordlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_scalarlist.c -o is_scalarlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c modp_numtoa.c -o modp_numtoa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c null_to_na.c -o null_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c num_to_char.c -o num_to_char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c parse.c -o parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c prettify.c -o prettify.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c push_parser.c -o push_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c r-base64.c -o r-base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c register.c -o register.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c row_collapse.c -o row_collapse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose_list.c -o transpose_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c validate.c -o validate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl.c -o yajl/yajl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_buf.c -o yajl/yajl_buf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_encode.c -o yajl/yajl_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_gen.c -o yajl/yajl_gen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_lex.c -o yajl/yajl_lex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_parser.c -o yajl/yajl_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp05u08k/R.INSTALL35d7e6442b057e/jsonlite/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘asJSON’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘asJSON’ with signature ‘"ITime"’: no definition for class “ITime” in method for ‘asJSON’ with signature ‘"hms"’: no definition for class “hms” in method for ‘asJSON’ with signature ‘"json"’: no definition for class “json” in method for ‘asJSON’ with signature ‘"integer64"’: no definition for class “integer64” in method for ‘asJSON’ with signature ‘"pairlist"’: no definition for class “pairlist” in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” in method for ‘asJSON’ with signature ‘"scalar"’: no definition for class “scalar” in method for ‘asJSON’ with signature ‘"sf"’: no definition for class “sf” in method for ‘asJSON’ with signature ‘"sfc"’: no definition for class “sfc” in method for ‘asJSON’ with signature ‘"vctrs_vctr"’: no definition for class “vctrs_vctr” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) begin installing package ‘fastmap’ * installing *source* package ‘MassSpecWavelet’ ... ** this is package ‘MassSpecWavelet’ version ‘1.72.1’ ** package ‘MassSpecWavelet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxyMokz/R.INSTALL35e0035f99ce03/MassSpecWavelet/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c find_local_maximum.c -o find_local_maximum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o MassSpecWavelet.so find_local_maximum.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxyMokz/R.INSTALL35e0035f99ce03/MassSpecWavelet/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-MassSpecWavelet/00new/MassSpecWavelet/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MassSpecWavelet) begin installing package ‘commonmark’ * installing *source* package ‘ProtGenerics’ ... ** this is package ‘ProtGenerics’ version ‘1.38.0’ ** package ‘ProtGenerics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘smooth’ in package ‘ProtGenerics’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ProtGenerics) begin installing package ‘glue’ * installing *source* package ‘base64enc’ ... ** this is package ‘base64enc’ version ‘0.1-3’ ** package ‘base64enc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWC5li8/R.INSTALL35ea6b5070b61e/base64enc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c uriencode.c -o uriencode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o base64enc.so base64.o uriencode.o utf8.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWC5li8/R.INSTALL35ea6b5070b61e/base64enc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-base64enc/00new/base64enc/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64enc) begin installing package ‘RColorBrewer’ * installing *source* package ‘ps’ ... ** this is package ‘ps’ version ‘1.8.1’ ** package ‘ps’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFk5uCi/R.INSTALL35d8b32665bf00/ps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -Wl,-O1 -Wall px.c -o px clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-common.c -o api-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common.c -o common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c extra.c -o extra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dummy.c -o dummy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c error-codes.c -o error-codes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c posix.c -o posix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-posix.c -o api-posix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c linux.c -o linux.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api-linux.c -o api-linux.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o cleancall.o posix.o api-posix.o linux.o api-linux.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFk5uCi/R.INSTALL35d8b32665bf00/ps/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ps/00new/ps ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ps) begin installing package ‘data.table’ * installing *source* package ‘mime’ ... ** this is package ‘mime’ version ‘0.12’ ** package ‘mime’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKcqlDx/R.INSTALL35ec167a6d67b6/mime/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rawmatch.c -o rawmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mime.so init.o rawmatch.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKcqlDx/R.INSTALL35ec167a6d67b6/mime/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mime/00new/mime/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mime) begin installing package ‘askpass’ * installing *source* package ‘colorspace’ ... ** this is package ‘colorspace’ version ‘2.1-1’ ** package ‘colorspace’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLjydWI/R.INSTALL35beff7fe77b0e/colorspace/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colorspace.c -o colorspace.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o colorspace.so colorspace.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLjydWI/R.INSTALL35beff7fe77b0e/colorspace/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-colorspace/00new/colorspace/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colorspace) begin installing package ‘lambda.r’ * installing *source* package ‘lazyeval’ ... ** this is package ‘lazyeval’ version ‘0.2.2’ ** package ‘lazyeval’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHhK44T/R.INSTALL35eadd77b251c5/lazyeval/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expr.c -o expr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c interp.c -o interp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lazy.c -o lazy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c name.c -o name.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHhK44T/R.INSTALL35eadd77b251c5/lazyeval/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lazyeval/00new/lazyeval/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lazyeval) begin installing package ‘munsell’ * installing *source* package ‘xfun’ ... ** this is package ‘xfun’ version ‘0.50’ ** package ‘xfun’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPqA9np/R.INSTALL35d60b5465376a/xfun/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o xfun.so base64.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPqA9np/R.INSTALL35d60b5465376a/xfun/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-xfun/00new/xfun/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xfun) begin installing package ‘limma’ * installing *source* package ‘BiocGenerics’ ... ** this is package ‘BiocGenerics’ version ‘0.52.0’ ** package ‘BiocGenerics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘aperm’ in package ‘BiocGenerics’ Creating a new generic function for ‘append’ in package ‘BiocGenerics’ Creating a new generic function for ‘as.data.frame’ in package ‘BiocGenerics’ Creating a new generic function for ‘cbind’ in package ‘BiocGenerics’ Creating a new generic function for ‘rbind’ in package ‘BiocGenerics’ Creating a new generic function for ‘do.call’ in package ‘BiocGenerics’ Creating a new generic function for ‘duplicated’ in package ‘BiocGenerics’ Creating a new generic function for ‘anyDuplicated’ in package ‘BiocGenerics’ Creating a new generic function for ‘eval’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmax’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmin’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmax.int’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmin.int’ in package ‘BiocGenerics’ Creating a new generic function for ‘Reduce’ in package ‘BiocGenerics’ Creating a new generic function for ‘Filter’ in package ‘BiocGenerics’ Creating a new generic function for ‘Find’ in package ‘BiocGenerics’ Creating a new generic function for ‘Map’ in package ‘BiocGenerics’ Creating a new generic function for ‘Position’ in package ‘BiocGenerics’ Creating a new generic function for ‘get’ in package ‘BiocGenerics’ Creating a new generic function for ‘mget’ in package ‘BiocGenerics’ Creating a new generic function for ‘grep’ in package ‘BiocGenerics’ Creating a new generic function for ‘grepl’ in package ‘BiocGenerics’ Creating a new generic function for ‘is.unsorted’ in package ‘BiocGenerics’ Creating a new generic function for ‘lapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘sapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘mapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘match’ in package ‘BiocGenerics’ Creating a new generic function for ‘order’ in package ‘BiocGenerics’ Creating a new generic function for ‘paste’ in package ‘BiocGenerics’ Creating a new generic function for ‘rank’ in package ‘BiocGenerics’ Creating a new generic function for ‘rownames’ in package ‘BiocGenerics’ Creating a new generic function for ‘colnames’ in package ‘BiocGenerics’ Creating a new generic function for ‘saveRDS’ in package ‘BiocGenerics’ Creating a new generic function for ‘union’ in package ‘BiocGenerics’ Creating a new generic function for ‘intersect’ in package ‘BiocGenerics’ Creating a new generic function for ‘setdiff’ in package ‘BiocGenerics’ Creating a new generic function for ‘table’ in package ‘BiocGenerics’ Creating a new generic function for ‘tapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘unique’ in package ‘BiocGenerics’ Creating a new generic function for ‘unsplit’ in package ‘BiocGenerics’ Creating a new generic function for ‘var’ in package ‘BiocGenerics’ Creating a new generic function for ‘sd’ in package ‘BiocGenerics’ Creating a new generic function for ‘which.min’ in package ‘BiocGenerics’ Creating a new generic function for ‘which.max’ in package ‘BiocGenerics’ Creating a new generic function for ‘IQR’ in package ‘BiocGenerics’ Creating a new generic function for ‘mad’ in package ‘BiocGenerics’ Creating a new generic function for ‘xtabs’ in package ‘BiocGenerics’ Creating a new generic function for ‘basename’ in package ‘BiocGenerics’ Creating a new generic function for ‘dirname’ in package ‘BiocGenerics’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocGenerics) begin installing package ‘affyio’ * installing *source* package ‘sourcetools’ ... ** this is package ‘sourcetools’ version ‘0.1.7-1’ ** package ‘sourcetools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbbAAxY/R.INSTALL35ecb7452d7a56/sourcetools/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Reader.cpp -o Reader.o In file included from Reader.cpp:3: In file included from ../inst/include/sourcetools/read/read.h:7: In file included from ../inst/include/sourcetools/read/MemoryMappedReader.h:10: ../inst/include/sourcetools/r/RHeaders.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Tokenizer.cpp -o Tokenizer.o In file included from Tokenizer.cpp:1: In file included from ../inst/include/sourcetools.h:9: In file included from ../inst/include/sourcetools/read/read.h:7: In file included from ../inst/include/sourcetools/read/MemoryMappedReader.h:10: ../inst/include/sourcetools/r/RHeaders.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sourcetools-init.c -o sourcetools-init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sourcetools.so Reader.o Tokenizer.o sourcetools-init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbbAAxY/R.INSTALL35ecb7452d7a56/sourcetools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sourcetools/00new/sourcetools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sourcetools) * installing *source* package ‘xtable’ ... ** this is package ‘xtable’ version ‘1.8-4’ ** package ‘xtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xtable) begin installing package ‘foreach’ begin installing package ‘highr’ * installing *source* package ‘RColorBrewer’ ... ** this is package ‘RColorBrewer’ version ‘1.1-3’ ** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RColorBrewer) begin installing package ‘processx’ * installing *source* package ‘askpass’ ... ** this is package ‘askpass’ version ‘1.2.1’ ** package ‘askpass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphbvBeA/R.INSTALL35f0a0648e7a13/askpass/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c askpass.c -o askpass.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o askpass.so askpass.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphbvBeA/R.INSTALL35f0a0648e7a13/askpass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-askpass/00new/askpass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (askpass) begin installing package ‘Biobase’ * installing *source* package ‘glue’ ... ** this is package ‘glue’ version ‘1.8.0’ ** package ‘glue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiwGzEz/R.INSTALL35ee02195f499e/glue/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trim.c -o trim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o glue.so glue.o init.o trim.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiwGzEz/R.INSTALL35ee02195f499e/glue/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-glue/00new/glue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glue) begin installing package ‘S4Vectors’ * installing *source* package ‘crayon’ ... ** this is package ‘crayon’ version ‘1.5.3’ ** package ‘crayon’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crayon) begin installing package ‘tinytex’ * installing *source* package ‘fastmap’ ... ** this is package ‘fastmap’ version ‘1.2.0’ ** package ‘fastmap’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLrqKQh/R.INSTALL35ed6a6225b0bf/fastmap/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fastmap.cpp -o fastmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fastmap.so fastmap.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLrqKQh/R.INSTALL35ed6a6225b0bf/fastmap/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fastmap/00new/fastmap/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastmap) begin installing package ‘openssl’ * installing *source* package ‘lambda.r’ ... ** this is package ‘lambda.r’ version ‘1.2.4’ ** package ‘lambda.r’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lambda.r) begin installing package ‘diffobj’ * installing *source* package ‘MALDIquant’ ... ** this is package ‘MALDIquant’ version ‘1.22.3’ ** package ‘MALDIquant’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8QApmy/R.INSTALL35e2ec6db04ea7/MALDIquant/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colMedians.c -o colMedians.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c localMaxima.c -o localMaxima.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lowerConvexHull.c -o lowerConvexHull.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c morphologicalFilters.c -o morphologicalFilters.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c snip.c -o snip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o MALDIquant.so colMedians.o init.o localMaxima.o lowerConvexHull.o morphologicalFilters.o snip.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8QApmy/R.INSTALL35e2ec6db04ea7/MALDIquant/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-MALDIquant/00new/MALDIquant/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘approxfun’ from package ‘stats’ in package ‘MALDIquant’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MALDIquant) begin installing package ‘futile.logger’ * installing *source* package ‘munsell’ ... ** this is package ‘munsell’ version ‘0.5.1’ ** package ‘munsell’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (munsell) * installing *source* package ‘highr’ ... ** this is package ‘highr’ version ‘0.11’ ** package ‘highr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highr) * installing *source* package ‘foreach’ ... ** this is package ‘foreach’ version ‘1.5.2’ ** package ‘foreach’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (foreach) begin installing package ‘doParallel’ * installing *source* package ‘yaml’ ... ** this is package ‘yaml’ version ‘2.3.10’ ** package ‘yaml’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1FDqqC/R.INSTALL35d72b40fe961c/yaml/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api.c -o api.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dumper.c -o dumper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c emitter.c -o emitter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c implicit.c -o implicit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loader.c -o loader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parser.c -o parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_emit.c -o r_emit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_ext.c -o r_ext.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_parse.c -o r_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reader.c -o reader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c scanner.c -o scanner.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1FDqqC/R.INSTALL35d72b40fe961c/yaml/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-yaml/00new/yaml/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml) begin installing package ‘knitr’ * installing *source* package ‘tinytex’ ... ** this is package ‘tinytex’ version ‘0.54’ ** package ‘tinytex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) * installing *source* package ‘matrixStats’ ... ** this is package ‘matrixStats’ version ‘1.5.0’ ** package ‘matrixStats’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIJjZaE/R.INSTALL35bee87887ad94/matrixStats/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c 000.init.c -o 000.init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c allocMatrix2.c -o allocMatrix2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c binCounts.c -o binCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c binMeans.c -o binMeans.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colCounts.c -o colCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colOrderStats.c -o colOrderStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colRanges.c -o colRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diff2.c -o diff2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c indexByRow.c -o indexByRow.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c logSumExp.c -o logSumExp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mean2.c -o mean2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c naming.c -o naming.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c productExpSumLog.c -o productExpSumLog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c psortKM.c -o psortKM.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCounts.c -o rowCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCummaxs.c -o rowCummaxs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCummins.c -o rowCummins.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCumprods.c -o rowCumprods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCumsums.c -o rowCumsums.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowDiffs.c -o rowDiffs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowLogSumExp.c -o rowLogSumExp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMads.c -o rowMads.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMeans2.c -o rowMeans2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMedians.c -o rowMedians.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowOrderStats.c -o rowOrderStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowRanges.c -o rowRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowRanksWithTies.c -o rowRanksWithTies.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowSums2.c -o rowSums2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowVars.c -o rowVars.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c signTabulate.c -o signTabulate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sum2.c -o sum2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c validateIndices.c -o validateIndices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weightedMean.c -o weightedMean.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weightedMedian.c -o weightedMedian.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c x_OP_y.c -o x_OP_y.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o naming.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIJjZaE/R.INSTALL35bee87887ad94/matrixStats/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-matrixStats/00new/matrixStats/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (matrixStats) begin installing package ‘MatrixGenerics’ * installing *source* package ‘digest’ ... ** this is package ‘digest’ version ‘0.6.37’ ** package ‘digest’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwyTWjz/R.INSTALL35d7de26511ef3/digest/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SpookyV2.cpp -o SpookyV2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3.c -o blake3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_dispatch.c -o blake3_dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_portable.c -o blake3_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c crc32.c -o crc32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c crc32c.cpp -o crc32c.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c crc32c_portable.cpp -o crc32c_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest.c -o digest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest2int.c -o digest2int.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pmurhash.c -o pmurhash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c raes.c -o raes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha2.c -o sha2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c spooky_serialize.cpp -o spooky_serialize.o spooky_serialize.cpp:25:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 25 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xxhash.c -o xxhash.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o crc32c.o crc32c_portable.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwyTWjz/R.INSTALL35d7de26511ef3/digest/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) * installing *source* package ‘doParallel’ ... ** this is package ‘doParallel’ version ‘1.0.17’ ** package ‘doParallel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doParallel) * installing *source* package ‘futile.logger’ ... ** this is package ‘futile.logger’ version ‘1.4.3’ ** package ‘futile.logger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (futile.logger) * installing *source* package ‘cli’ ... ** this is package ‘cli’ version ‘3.6.3’ ** package ‘cli’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqrkHSN/R.INSTALL35cf674db6d24e/cli/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c ansi.c -o ansi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c diff.c -o diff.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c inst.c -o inst.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress-unix.c -o keypress-unix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress-win.c -o keypress-win.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress.c -o keypress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c progress-altrep.c -o progress-altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c progress.c -o progress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c thread.c -o thread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c tty.c -o tty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vt.c -o vt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vtparse.c -o vtparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vtparse_table.c -o vtparse_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c win-utf8.c -o win-utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c winfiles.c -o winfiles.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o -lpthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqrkHSN/R.INSTALL35cf674db6d24e/cli/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cli/00new/cli/libs ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cli) begin installing package ‘desc’ * installing *source* package ‘commonmark’ ... ** this is package ‘commonmark’ version ‘1.9.2’ ** package ‘commonmark’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFbpEcX/R.INSTALL35edda13be65f6/commonmark/src' rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions/tasklist.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions.c -o extensions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c wrapper.c -o wrapper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/cmark.c -o cmark/cmark.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/node.c -o cmark/node.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/iterator.c -o cmark/iterator.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/blocks.c -o cmark/blocks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/inlines.c -o cmark/inlines.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/scanners.c -o cmark/scanners.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/utf8.c -o cmark/utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/buffer.c -o cmark/buffer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/references.c -o cmark/references.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/render.c -o cmark/render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/man.c -o cmark/man.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/xml.c -o cmark/xml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/html.c -o cmark/html.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/commonmark.c -o cmark/commonmark.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/latex.c -o cmark/latex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/arena.c -o cmark/arena.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/linked_list.c -o cmark/linked_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/plugin.c -o cmark/plugin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/registry.c -o cmark/registry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/syntax_extension.c -o cmark/syntax_extension.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/plaintext.c -o cmark/plaintext.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/footnotes.c -o cmark/footnotes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cmark/map.c -o cmark/map.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/autolink.c -o extensions/autolink.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/core-extensions.c -o extensions/core-extensions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/ext_scanners.c -o extensions/ext_scanners.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/strikethrough.c -o extensions/strikethrough.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/table.c -o extensions/table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/tagfilter.c -o extensions/tagfilter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c extensions/tasklist.c -o extensions/tasklist.o ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions/tasklist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFbpEcX/R.INSTALL35edda13be65f6/commonmark/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-commonmark/00new/commonmark/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (commonmark) * installing *source* package ‘XML’ ... ** this is package ‘XML’ version ‘3.99-0.18’ ** package ‘XML’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to enable C11 features... none needed checking how to run the C preprocessor... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -E checking for sed... /usr/bin/sed checking for pkg-config... /usr/bin/pkg-config checking for xml2-config... /usr/bin/xml2-config USE_XML2 = yes SED_EXTENDED_ARG: -E Minor 9, Patch 14 for 2.9.14 Located parser file -I/usr/include/libxml2/parser.h Checking for 1.8: -I/usr/include/libxml2 Using libxml2.* checking for gzopen in -lz... yes checking for xmlParseFile in -lxml2... yes checking for xmlHashSize in -lxml2... yes Using built-in xmlHashSize Checking DTD parsing (presence of externalSubset)... checking for xmlHashSize in -lxml2... (cached) yes Found xmlHashSize checking for xmlOutputBufferCreateBuffer in -lxml2... yes have xmlOutputBufferCreateBuffer() checking for xmlDocDumpFormatMemoryEnc in -lxml2... yes checking for libxml/xmlversion.h... yes Expat: FALSE Checking for return type of xmlHashScan element routine. No return value for xmlHashScan xmlNs has a context field Checking for cetype_t enumeration Using recent version of R with cetype_t enumeration type for encoding checking for xmlsec1-config... no nodegc default xml-debug default Version has XML_WITH_ZLIB Version has xmlHasFeature() **************************************** Configuration information: Libxml settings libxml include directory: -I/usr/include/libxml2 libxml library directory: -lxml2 -lz -lxml2 libxml 2: -DLIBXML2=1 Compilation flags: -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 Link flags: -lxml2 -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config.status: creating inst/scripts/RSXML.csh config.status: creating inst/scripts/RSXML.bsh ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZn4kpD/R.INSTALL35bf474c00dfcf/XML/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DocParse.c -o DocParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c EventParse.c -o EventParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ExpatParse.c -o ExpatParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c HTMLParse.c -o HTMLParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NodeGC.c -o NodeGC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RSDTD.c -o RSDTD.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RUtils.c -o RUtils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rcatalog.c -o Rcatalog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Utils.c -o Utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLEventParse.c -o XMLEventParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLHashTree.c -o XMLHashTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLTree.c -o XMLTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fixNS.c -o fixNS.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c libxmlFeatures.c -o libxmlFeatures.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c schema.c -o schema.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xmlsecurity.c -o xmlsecurity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xpath.c -o xpath.o xpath.c:255:15: warning: assigning to 'xmlXPathFunction' (aka 'void (*)(struct _xmlXPathParserContext *, int)') from 'void *' converts between void pointer and function pointer [-Wpedantic] 255 | routine = R_ExternalPtrAddr(el); | ^ ~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o XML.so DocParse.o EventParse.o ExpatParse.o HTMLParse.o NodeGC.o RSDTD.o RUtils.o Rcatalog.o Utils.o XMLEventParse.o XMLHashTree.o XMLTree.o fixNS.o libxmlFeatures.o schema.o xmlsecurity.o xpath.o -lxml2 -lz -lxml2 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZn4kpD/R.INSTALL35bf474c00dfcf/XML/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-XML/00new/XML/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘source’ from package ‘base’ in package ‘XML’ in method for ‘xmlAttrsToDataFrame’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readKeyValueDB’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readSolrDoc’ with signature ‘"AsIs"’: no definition for class “AsIs” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XML) * installing *source* package ‘processx’ ... ** this is package ‘processx’ version ‘3.8.5’ ** package ‘processx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnQfdwR/R.INSTALL35f4e34c55f632/processx/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -Wl,-O1 -Wall tools/px.c -o tools/px clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -Wl,-O1 -I../inst/include -Wall tools/sock.c -o tools/sock clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -Wl,-O1 supervisor/supervisor.c \ supervisor/utils.c -o supervisor/supervisor clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c client.c -o client.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L"/home/hornik/tmp/R-d-clang-xtra/lib" -Wl,-O1 -o client.so base64.o client.o errors.o \ -L"/home/hornik/tmp/R-d-clang-xtra/lib" -lR clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c poll.c -o poll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c processx-connection.c -o processx-connection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c processx-vector.c -o processx-vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c create-time.c -o create-time.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/childlist.c -o unix/childlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/connection.c -o unix/connection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/processx.c -o unix/processx.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/sigchld.c -o unix/sigchld.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/utils.c -o unix/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unix/named_pipe.c -o unix/named_pipe.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnQfdwR/R.INSTALL35f4e34c55f632/processx/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-processx/00new/processx ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (processx) begin installing package ‘callr’ * installing *source* package ‘MatrixGenerics’ ... ** this is package ‘MatrixGenerics’ version ‘1.18.0’ ** package ‘MatrixGenerics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘rowAlls’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAlls’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAnyNAs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAnyNAs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAnys’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAnys’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAvgsPerColSet’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAvgsPerRowSet’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCollapse’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCollapse’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCounts’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCounts’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCummaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCummaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCummins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCummins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCumprods’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCumprods’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCumsums’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCumsums’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowIQRDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colIQRDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowIQRs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colIQRs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowLogSumExps’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colLogSumExps’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMadDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMadDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMeans2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMeans2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowOrderStats’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colOrderStats’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowProds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colProds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowQuantiles’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colQuantiles’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowRanges’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colRanges’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowRanks’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colRanks’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSdDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSdDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSums2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSums2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowTabulates’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colTabulates’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowVarDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colVarDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMeans’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMeans’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedVars’ in package ‘MatrixGenerics’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MatrixGenerics) * installing *source* package ‘openssl’ ... ** this is package ‘openssl’ version ‘2.3.1’ ** package ‘openssl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-l:libssl.so.3 -l:libcrypto.so.3 ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpus8jMn/R.INSTALL35f7c554fe3512/openssl/src' rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bignum.c -o bignum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cert.c -o cert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compatibility.c -o compatibility.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diffie.c -o diffie.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c envelope.c -o envelope.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c error.c -o error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c info.c -o info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keygen.c -o keygen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keys.c -o keys.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c onload.c -o onload.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c openssh.c -o openssh.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c password.c -o password.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pbkdf.c -o pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pem.c -o pem.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs12.c -o pkcs12.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs7.c -o pkcs7.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rand.c -o rand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rsa.c -o rsa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c signing.c -o signing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c stream.c -o stream.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c x25519.c -o x25519.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/blowfish.c -o bcrypt/blowfish.o ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.3 -l:libcrypto.so.3 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpus8jMn/R.INSTALL35f7c554fe3512/openssl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-openssl/00new/openssl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (openssl) begin installing package ‘httr’ * installing *source* package ‘rlang’ ... ** this is package ‘rlang’ version ‘1.1.4’ ** package ‘rlang’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLkv5w8/R.INSTALL35d03d3ea1d913/rlang/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c capture.c -o capture.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c internal.c -o internal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rlang.so capture.o internal.o rlang.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLkv5w8/R.INSTALL35d03d3ea1d913/rlang/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rlang/00new/rlang/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlang) begin installing package ‘lifecycle’ begin installing package ‘htmltools’ begin installing package ‘cachem’ * installing *source* package ‘affyio’ ... ** this is package ‘affyio’ version ‘1.76.0’ ** package ‘affyio’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to accept ISO C89... none needed checking how to run the C preprocessor... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for main in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes checking for pthread_create in -lpthread... yes checking if we can use pthreads... yes checking if PTHREAD_STACK_MIN is defined... yes configure: Enabling threading for affyio configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxbyBab/R.INSTALL35f1e06cdfe964/affyio/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c fread_functions.c -o fread_functions.o fread_functions.c:728:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 728 | void test_parsers_le(){ | ^ | void fread_functions.c:801:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 801 | void test_parsers_be(){ | ^ | void 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c init_package.c -o init_package.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_abatch.c -o read_abatch.o read_abatch.c:656:207: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 656 | Rprintf("Warning: found an empty line where not expected in %s.\nThis means that there is a cel intensity missing from the cel file.\nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^~~ | %zu read_abatch.c:656:212: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 656 | Rprintf("Warning: found an empty line where not expected in %s.\nThis means that there is a cel intensity missing from the cel file.\nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^ | %zu read_abatch.c:665:177: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:665:182: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:677:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:677:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:689:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:689:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:764:209: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 764 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^~~ | %zu read_abatch.c:764:214: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 764 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^ | %zu read_abatch.c:774:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 774 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:774:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 774 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:785:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 785 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:785:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 785 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:795:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 795 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:795:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 795 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:805:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 805 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:805:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 805 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:870:209: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 870 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^~~ | %zu read_abatch.c:870:214: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 870 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~~ ^ | %zu read_abatch.c:879:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 879 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:879:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 879 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:890:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 890 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:890:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 890 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:901:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 901 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:901:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 901 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:913:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 913 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:913:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 913 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:924:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 924 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:924:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 924 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1567:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1567 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1567:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1567 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1578:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1578 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1578:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1578 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1589:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1589 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1589:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1589 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1665:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1665:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1677:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1677:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1689:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1689:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1701:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1701 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1701:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1701 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1769:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1769 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1769:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1769 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1780:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1780 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1780:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1780 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1791:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1791 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1791:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1791 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1801:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1801 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1801:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1801 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu read_abatch.c:1811:176: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1811 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~ | %zu read_abatch.c:1811:181: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 1811 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~~ ^~~~ | %zu 54 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_bpmap.c -o read_bpmap.o read_bpmap.c:849:42: warning: format specifies type 'char *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat] 849 | error("Unable to open the file %s",filename); | ~~ ^~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_cdf_xda.c -o read_cdf_xda.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_cdffile2.c -o read_cdffile2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_celfile_generic.c -o read_celfile_generic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_clf.c -o read_clf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_generic.c -o read_generic.o read_generic.c:1293:42: warning: format specifies type 'double' but the argument has type 'int' [-Wformat] 1293 | Rprintf("Its a float value is %f\n",temp32); | ~~ ^~~~~~ | %d read_generic.c:1293:42: warning: variable 'temp32' is uninitialized when used here [-Wuninitialized] 1293 | Rprintf("Its a float value is %f\n",temp32); | ^~~~~~ read_generic.c:1283:13: note: initialize the variable 'temp32' to silence this warning 1283 | int temp32; | ^ | = 0 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_multichannel_celfile_generic.c -o read_multichannel_celfile_generic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c read_pgf.c -o read_pgf.o read_pgf.c:363:12: warning: unused function 'token_ends_with' [-Wunused-function] 363 | static int token_ends_with(char *token, char *ends_in){ | ^~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o affyio.so fread_functions.o init_package.o read_abatch.o read_bpmap.o read_cdf_xda.o read_cdffile2.o read_celfile_generic.o read_clf.o read_generic.o read_multichannel_celfile_generic.o read_pgf.o -lpthread -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxbyBab/R.INSTALL35f1e06cdfe964/affyio/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-affyio/00new/affyio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (affyio) * installing *source* package ‘Rcpp’ ... ** this is package ‘Rcpp’ version ‘1.0.14’ ** package ‘Rcpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpbqu5me/R.INSTALL35cd97a188db/Rcpp/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c api.cpp -o api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c attributes.cpp -o attributes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c barrier.cpp -o barrier.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c date.cpp -o date.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c module.cpp -o module.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rcpp_init.cpp -o rcpp_init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpbqu5me/R.INSTALL35cd97a188db/Rcpp/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rcpp/00new/Rcpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcpp) begin installing package ‘magick’ begin installing package ‘plyr’ begin installing package ‘later’ begin installing package ‘Rdisop’ * installing *source* package ‘desc’ ... ** this is package ‘desc’ version ‘1.4.3’ ** package ‘desc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (desc) * installing *source* package ‘fs’ ... ** this is package ‘fs’ version ‘1.6.5’ ** package ‘fs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwjMqUn/R.INSTALL35bf3059fd2f2f/fs/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dir.cc -o dir.o In file included from dir.cc:6: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c error.cc -o error.o In file included from error.cc:1: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c file.cc -o file.o In file included from file.cc:10: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fs.cc -o fs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c getmode.cc -o getmode.o In file included from getmode.cc:1: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c id.cc -o id.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cc -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c link.cc -o link.o In file included from link.cc:6: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c path.cc -o path.o In file included from path.cc:9: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c utils.cc -o utils.o In file included from utils.cc:6: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c unix/getmode.cc -o unix/getmode.o In file included from unix/getmode.cc:1: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/setmode.c -o bsd/setmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/strmode.c -o bsd/strmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/reallocarray.c -o bsd/reallocarray.o touch libuv-1.44.2/aclocal.m4 && touch libuv-1.44.2/configure && touch libuv-1.44.2/Makefile.in (cd libuv-1.44.2 \ && CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer" CPPFLAGS="-I/usr/local/include" CFLAGS="-g -O3 -Wall -pedantic -fpic -fvisibility=hidden -std=c99" AR="ar" RANLIB="ranlib" LDFLAGS="-Wl,-O1" ./configure --quiet) make --directory=libuv-1.44.2 \ HAVE_DTRACE=0 make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpwjMqUn/R.INSTALL35bf3059fd2f2f/fs/src/libuv-1.44.2' CC src/libuv_la-fs-poll.lo CC src/libuv_la-idna.lo CC src/libuv_la-inet.lo CC src/libuv_la-random.lo CC src/libuv_la-strscpy.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-timer.lo CC src/libuv_la-uv-data-getter-setters.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/libuv_la-strtok.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-random-devurandom.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-linux-core.lo CC src/unix/libuv_la-linux-inotify.lo CC src/unix/libuv_la-linux-syscalls.lo CC src/unix/libuv_la-procfs-exepath.lo CC src/unix/libuv_la-proctitle.lo CC src/unix/libuv_la-random-getrandom.lo CC src/unix/libuv_la-random-sysctl-linux.lo CC src/unix/libuv_la-epoll.lo CCLD libuv.la make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpwjMqUn/R.INSTALL35bf3059fd2f2f/fs/src/libuv-1.44.2' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fs.so dir.o error.o file.o fs.o getmode.o id.o init.o link.o path.o utils.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.44.2/.libs/libuv.a -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwjMqUn/R.INSTALL35bf3059fd2f2f/fs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fs) * installing *source* package ‘lifecycle’ ... ** this is package ‘lifecycle’ version ‘1.0.4’ ** package ‘lifecycle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lifecycle) begin installing package ‘gtable’ begin installing package ‘vctrs’ * installing *source* package ‘cachem’ ... ** this is package ‘cachem’ version ‘1.1.0’ ** package ‘cachem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLog0bv/R.INSTALL361181787a941c/cachem/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cachem.so cache.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLog0bv/R.INSTALL361181787a941c/cachem/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cachem/00new/cachem/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cachem) begin installing package ‘memoise’ * installing *source* package ‘knitr’ ... ** this is package ‘knitr’ version ‘1.49’ ** package ‘knitr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitr) * installing *source* package ‘Biobase’ ... ** this is package ‘Biobase’ version ‘2.66.0’ ** package ‘Biobase’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppQTGsH/R.INSTALL35f51cee96b57/Biobase/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rinit.c -o Rinit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c envir.c -o envir.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matchpt.c -o matchpt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMedians.c -o rowMedians.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sublist_extract.c -o sublist_extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppQTGsH/R.INSTALL35f51cee96b57/Biobase/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Biobase/00new/Biobase/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Biobase) begin installing package ‘affy’ begin installing package ‘pcaMethods’ * installing *source* package ‘htmltools’ ... ** this is package ‘htmltools’ version ‘0.5.8.1’ ** package ‘htmltools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpn4EVfA/R.INSTALL361183d609148/htmltools/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c template.c -o template.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o htmltools.so init.o template.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpn4EVfA/R.INSTALL361183d609148/htmltools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-htmltools/00new/htmltools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmltools) begin installing package ‘sass’ begin installing package ‘fontawesome’ begin installing package ‘jquerylib’ begin installing package ‘crosstalk’ * installing *source* package ‘callr’ ... ** this is package ‘callr’ version ‘3.7.6’ ** package ‘callr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (callr) begin installing package ‘pkgbuild’ * installing *source* package ‘memoise’ ... ** this is package ‘memoise’ version ‘2.0.1’ ** package ‘memoise’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memoise) * installing *source* package ‘httr’ ... ** this is package ‘httr’ version ‘1.4.7’ ** package ‘httr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (httr) * installing *source* package ‘diffobj’ ... ** this is package ‘diffobj’ version ‘0.3.5’ ** package ‘diffobj’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBGA3Xs/R.INSTALL35f9db6d435141/diffobj/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diff.c -o diff.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diffobj.c -o diffobj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o diffobj.so diff.o diffobj.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBGA3Xs/R.INSTALL35f9db6d435141/diffobj/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-diffobj/00new/diffobj/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffobj) begin installing package ‘waldo’ * installing *source* package ‘gtable’ ... ** this is package ‘gtable’ version ‘0.3.6’ ** package ‘gtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtable) * installing *source* package ‘farver’ ... ** this is package ‘farver’ version ‘2.1.2’ ** package ‘farver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmps7WBql/R.INSTALL35bf2d82498a3/farver/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ColorSpace.cpp -o ColorSpace.o ColorSpace.cpp:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Comparison.cpp -o Comparison.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Conversion.cpp -o Conversion.o Conversion.cpp:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c encode.cpp -o encode.o In file included from encode.cpp:1: ./encode.h:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c farver.cpp -o farver.o In file included from farver.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmps7WBql/R.INSTALL35bf2d82498a3/farver/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-farver/00new/farver/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (farver) begin installing package ‘scales’ * installing *source* package ‘jquerylib’ ... ** this is package ‘jquerylib’ version ‘0.1.4’ ** package ‘jquerylib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jquerylib) * installing *source* package ‘plyr’ ... ** this is package ‘plyr’ version ‘1.8.9’ ** package ‘plyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLYSYvW/R.INSTALL36125c2a10580d/plyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loop_apply.c -o loop_apply.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c split-numeric.cpp -o split-numeric.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLYSYvW/R.INSTALL36125c2a10580d/plyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-plyr/00new/plyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plyr) begin installing package ‘mzID’ * installing *source* package ‘fontawesome’ ... ** this is package ‘fontawesome’ version ‘0.5.3’ ** package ‘fontawesome’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontawesome) * installing *source* package ‘segmented’ ... ** this is package ‘segmented’ version ‘2.1-3’ ** package ‘segmented’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (segmented) * installing *source* package ‘waldo’ ... ** this is package ‘waldo’ version ‘0.6.1’ ** package ‘waldo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (waldo) * installing *source* package ‘pkgbuild’ ... ** this is package ‘pkgbuild’ version ‘1.4.5’ ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgbuild) begin installing package ‘pkgload’ * installing *source* package ‘crosstalk’ ... ** this is package ‘crosstalk’ version ‘1.2.1’ ** package ‘crosstalk’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crosstalk) * installing *source* package ‘later’ ... ** this is package ‘later’ version ‘1.4.1’ ** package ‘later’ successfully unpacked and MD5 sums checked ** using staged installation Running configure script -latomic linker flag not needed. Found UBSAN. Will skip tests that raise false positives. ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpyo9YJu/R.INSTALL3612593ba2760d/later/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c callback_registry.cpp -o callback_registry.o In file included from callback_registry.cpp:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c debug.cpp -o debug.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fd.cpp -o fd.o In file included from fd.cpp:7: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later.cpp -o later.o In file included from later.cpp:1: In file included from ./later.h:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later_posix.cpp -o later_posix.o In file included from later_posix.cpp:9: In file included from ./later.h:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later_win32.cpp -o later_win32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timer_posix.cpp -o timer_posix.o In file included from timer_posix.cpp:6: In file included from ./timer_posix.h:8: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timestamp_unix.cpp -o timestamp_unix.o In file included from timestamp_unix.cpp:5: In file included from ./timeconv.h:9: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timestamp_win32.cpp -o timestamp_win32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tinycthread.c -o tinycthread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wref.c -o wref.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o later.so RcppExports.o callback_registry.o debug.o fd.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o wref.o -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpyo9YJu/R.INSTALL3612593ba2760d/later/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-later/00new/later/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (later) begin installing package ‘promises’ * installing *source* package ‘affy’ ... ** this is package ‘affy’ version ‘1.84.0’ ** package ‘affy’ successfully unpacked and MD5 sums checked ** using staged installation creating cache ./config.cache checking how to run the C preprocessor... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -E checking for main in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes updating cache ./config.cache creating ./config.status creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyHlDcf/R.INSTALL3616244a9bf3f4/affy/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/preprocessCore/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c chipbackground.c -o chipbackground.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/preprocessCore/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c getall_locations.c -o getall_locations.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/preprocessCore/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c mas5calls.c -o mas5calls.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/preprocessCore/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c rma2.c -o rma2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/preprocessCore/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -fpic -g -O3 -Wall -pedantic -c rma_common.c -o rma_common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o affy.so chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyHlDcf/R.INSTALL3616244a9bf3f4/affy/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-affy/00new/affy/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (affy) * installing *source* package ‘mzID’ ... ** this is package ‘mzID’ version ‘1.44.0’ ** package ‘mzID’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mzID) * installing *source* package ‘BH’ ... ** this is package ‘BH’ version ‘1.87.0-1’ ** package ‘BH’ successfully unpacked and MD5 sums checked ** using staged installation ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BH) begin installing package ‘BiocParallel’ * installing *source* package ‘pkgload’ ... ** this is package ‘pkgload’ version ‘1.4.0’ ** package ‘pkgload’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgload) begin installing package ‘testthat’ * installing *source* package ‘limma’ ... ** this is package ‘limma’ version ‘3.62.1’ ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptN8Exa/R.INSTALL35f1934649ef18/limma/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c normexp.c -o normexp.o normexp.c:18:8: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 18 | void ex(){} | ^ | void normexp.c:154:10: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 154 | void ex(); | ^ | void normexp.c:166:78: warning: passing 'void (*)()' to parameter of type 'void *' converts between void pointer and function pointer [-Wpedantic] 166 | nmmin(3, par, parsOut, Fmin, normexp_m2loglik_saddle, fail, abstol, intol, &ex, alpha, beta, gamma, trace, fncount, maxit); | ^~~ /home/hornik/tmp/R-d-clang-xtra/include/R_ext/Applic.h:72:51: note: passing argument to parameter 'ex' here 72 | int *fail, double abstol, double intol, void *ex, | ^ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weighted_lowess.c -o weighted_lowess.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o limma.so init.o normexp.o weighted_lowess.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptN8Exa/R.INSTALL35f1934649ef18/limma/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-limma/00new/limma/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (limma) * installing *source* package ‘scales’ ... ** this is package ‘scales’ version ‘1.3.0’ ** package ‘scales’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scales) * installing *source* package ‘pcaMethods’ ... ** this is package ‘pcaMethods’ version ‘1.98.0’ ** package ‘pcaMethods’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqsqEMH/R.INSTALL3616233bd559f4/pcaMethods/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c nipals.cpp -o nipals.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o pcaMethods.so RcppExports.o nipals.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqsqEMH/R.INSTALL3616233bd559f4/pcaMethods/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-pcaMethods/00new/pcaMethods/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘loadings’ in package ‘pcaMethods’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pcaMethods) * installing *source* package ‘data.table’ ... ** this is package ‘data.table’ version ‘1.16.4’ ** package ‘data.table’ successfully unpacked and MD5 sums checked ** using staged installation zlib 1.3.1 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzIsi4R/R.INSTALL35f0456b901955/data.table/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c assign.c -o assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c between.c -o between.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c bmerge.c -o bmerge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c chmatch.c -o chmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c cj.c -o cj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c coalesce.c -o coalesce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c dogroups.c -o dogroups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fastmean.c -o fastmean.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fcast.c -o fcast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fifelse.c -o fifelse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fmelt.c -o fmelt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c forder.c -o forder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frank.c -o frank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fread.c -o fread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c freadR.c -o freadR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c froll.c -o froll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frollR.c -o frollR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frolladaptive.c -o frolladaptive.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fsort.c -o fsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwrite.c -o fwrite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwriteR.c -o fwriteR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c gsumm.c -o gsumm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c idatetime.c -o idatetime.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c ijoin.c -o ijoin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c inrange.c -o inrange.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nafill.c -o nafill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c negate.c -o negate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nqrecreateindices.c -o nqrecreateindices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c openmp-utils.c -o openmp-utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c programming.c -o programming.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c quickselect.c -o quickselect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c rbindlist.c -o rbindlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c reorder.c -o reorder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c shift.c -o shift.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c snprintf.c -o snprintf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c subset.c -o subset.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c types.c -o types.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c uniqlist.c -o uniqlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c vecseq.c -o vecseq.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c wrappers.c -o wrappers.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o idatetime.o ijoin.o init.o inrange.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR PKG_CFLAGS = -fopenmp PKG_LIBS = -fopenmp -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzIsi4R/R.INSTALL35f0456b901955/data.table/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) * installing *source* package ‘Rdisop’ ... ** this is package ‘Rdisop’ version ‘1.66.0’ ** package ‘Rdisop’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJlNsVO/R.INSTALL36125d62775407/Rdisop/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c disop.cpp -o disop.o disop.cpp:106:8: warning: unused variable 'parityeven' [-Wunused-variable] 106 | bool parityeven = !parityodd; | ^~~~~~~~~~ disop.cpp:191:6: warning: unused variable 'number_molecules_shown' [-Wunused-variable] 191 | int number_molecules_shown = 100; | ^~~~~~~~~~~~~~~~~~~~~~ In file included from disop.cpp:28: ./imslib/src/ims/decomp/decomputils.h:92:53: warning: unused typedef 'weight_type' [-Wunused-local-typedef] 92 | typedef typename DecompositionWeights::weight_type weight_type; | ^ disop.cpp:174:42: warning: unused typedef 'decomposition_type' [-Wunused-local-typedef] 174 | typedef decompositions_t::value_type decomposition_type; | ^ disop.cpp:169:39: warning: unused typedef 'mass_type' [-Wunused-local-typedef] 169 | typedef distribution_t::mass_type mass_type; | ^ disop.cpp:171:47: warning: unused typedef 'nominal_mass_type' [-Wunused-local-typedef] 171 | typedef distribution_t::nominal_mass_type nominal_mass_type; | ^ disop.cpp:377:40: warning: unused typedef 'mass_type' [-Wunused-local-typedef] 377 | typedef distribution_t::mass_type mass_type; | ^ disop.cpp:626:43: warning: unused typedef 'scorer_type' [-Wunused-local-typedef] 626 | typedef DistributionProbabilityScorer scorer_type; | ^ disop.cpp:709:32: warning: unused typedef 'elements_type' [-Wunused-local-typedef] 709 | typedef alphabet_t::container elements_type; | ^ disop.cpp:814:33: warning: unused typedef 'elements_type' [-Wunused-local-typedef] 814 | typedef alphabet_t::container elements_type; | ^ 10 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/element.cpp -o imslib/src/ims/element.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/composedelement.cpp -o imslib/src/ims/composedelement.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/isotopedistribution.cpp -o imslib/src/ims/isotopedistribution.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/alphabet.cpp -o imslib/src/ims/alphabet.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/weights.cpp -o imslib/src/ims/weights.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/distributedalphabet.cpp -o imslib/src/ims/distributedalphabet.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/transformation.cpp -o imslib/src/ims/transformation.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/isotopespecies.cpp -o imslib/src/ims/isotopespecies.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/alphabettextparser.cpp -o imslib/src/ims/base/parser/alphabettextparser.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/distributedalphabettextparser.cpp -o imslib/src/ims/base/parser/distributedalphabettextparser.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/massestextparser.cpp -o imslib/src/ims/base/parser/massestextparser.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/moleculesequenceparser.cpp -o imslib/src/ims/base/parser/moleculesequenceparser.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/standardmoleculesequenceparser.cpp -o imslib/src/ims/base/parser/standardmoleculesequenceparser.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/keggligandcompoundsparser.cpp -o imslib/src/ims/base/parser/keggligandcompoundsparser.o imslib/src/ims/base/parser/keggligandcompoundsparser.cpp:53:31: warning: '&&' within '||' [-Wlogical-op-parentheses] 53 | for (; letter_pos < last_pos && | ~~~~~~~~~~~~~~~~~~~~~~^~ 54 | ( std::isalpha(sequence[letter_pos]) && std::isupper(sequence[letter_pos])) || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ imslib/src/ims/base/parser/keggligandcompoundsparser.cpp:53:31: note: place parentheses around the '&&' expression to silence this warning 53 | for (; letter_pos < last_pos && | ^ | ( 54 | ( std::isalpha(sequence[letter_pos]) && std::isupper(sequence[letter_pos])) || | ) 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/base/parser/moleculeionchargemodificationparser.cpp -o imslib/src/ims/base/parser/moleculeionchargemodificationparser.o imslib/src/ims/base/parser/moleculeionchargemodificationparser.cpp:102:18: warning: variable 'i' set but not used [-Wunused-but-set-variable] 102 | for (size_type i = 0; letter_pos < len && | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/calib/linepairstabber.cpp -o imslib/src/ims/calib/linepairstabber.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/calib/matchmatrix.cpp -o imslib/src/ims/calib/matchmatrix.o imslib/src/ims/calib/matchmatrix.cpp:84:6: warning: variable 'score' set but not used [-Wunused-but-set-variable] 84 | int score = 0; | ^ imslib/src/ims/calib/matchmatrix.cpp:106:6: warning: variable 'score' set but not used [-Wunused-but-set-variable] 106 | int score = 0; | ^ 2 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/calib/linearpointsetmatcher.cpp -o imslib/src/ims/calib/linearpointsetmatcher.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/decomp/realmassdecomposer.cpp -o imslib/src/ims/decomp/realmassdecomposer.o In file included from imslib/src/ims/decomp/realmassdecomposer.cpp:9: ./imslib/src/ims/decomp/decomputils.h:92:53: warning: unused typedef 'weight_type' [-Wunused-local-typedef] 92 | typedef typename DecompositionWeights::weight_type weight_type; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/utils/distribution.cpp -o imslib/src/ims/utils/distribution.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/distributionprobabilityscorer.cpp -o imslib/src/ims/distributionprobabilityscorer.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/characteralphabet.cpp -o imslib/src/ims/characteralphabet.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I./imslib/src/ -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imslib/src/ims/nitrogenrulefilter.cpp -o imslib/src/ims/nitrogenrulefilter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Rdisop.so disop.o imslib/src/ims/element.o imslib/src/ims/composedelement.o imslib/src/ims/isotopedistribution.o imslib/src/ims/alphabet.o imslib/src/ims/weights.o imslib/src/ims/distributedalphabet.o imslib/src/ims/transformation.o imslib/src/ims/isotopespecies.o imslib/src/ims/base/parser/alphabettextparser.o imslib/src/ims/base/parser/distributedalphabettextparser.o imslib/src/ims/base/parser/massestextparser.o imslib/src/ims/base/parser/moleculesequenceparser.o imslib/src/ims/base/parser/standardmoleculesequenceparser.o imslib/src/ims/base/parser/keggligandcompoundsparser.o imslib/src/ims/base/parser/moleculeionchargemodificationparser.o imslib/src/ims/calib/linepairstabber.o imslib/src/ims/calib/matchmatrix.o imslib/src/ims/calib/linearpointsetmatcher.o imslib/src/ims/decomp/realmassdecomposer.o imslib/src/ims/utils/distribution.o imslib/src/ims/distributionprobabilityscorer.o imslib/src/ims/characteralphabet.o imslib/src/ims/nitrogenrulefilter.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJlNsVO/R.INSTALL36125d62775407/Rdisop/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rdisop/00new/Rdisop/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rdisop) * installing *source* package ‘promises’ ... ** this is package ‘promises’ version ‘1.3.2’ ** package ‘promises’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpW2Ju0S/R.INSTALL361d0248e2a365/promises/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c promise_task.cpp -o promise_task.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o promises.so RcppExports.o promise_task.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpW2Ju0S/R.INSTALL361d0248e2a365/promises/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-promises/00new/promises/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (promises) begin installing package ‘httpuv’ * installing *source* package ‘kernlab’ ... ** this is package ‘kernlab’ version ‘0.9-33’ ** package ‘kernlab’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYnzAik/R.INSTALL35cf3e771375c5/kernlab/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c brweight.cpp -o brweight.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ctable.cpp -o ctable.o ctable.cpp:60:9: warning: variable 'lcp_idx' set but not used [-Wunused-but-set-variable] 60 | UInt32 lcp_idx = 0, lcp_prev_idx = 0; | ^ ctable.cpp:60:22: warning: variable 'lcp_prev_idx' set but not used [-Wunused-but-set-variable] 60 | UInt32 lcp_idx = 0, lcp_prev_idx = 0; | ^ 2 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cweight.cpp -o cweight.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dbreakpt.c -o dbreakpt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dcauchy.c -o dcauchy.o dcauchy.c:91:29: warning: variable 'nsteps' set but not used [-Wunused-but-set-variable] 91 | int search, interp, nbrpt, nsteps = 1, i, inc = 1; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dgpnrm.c -o dgpnrm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dgpstep.c -o dgpstep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dprecond.c -o dprecond.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dprsrch.c -o dprsrch.o dprsrch.c:93:25: warning: variable 'nsteps' set but not used [-Wunused-but-set-variable] 93 | int search = 1, nbrpt, nsteps = 0, i, inc = 1; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dspcg.c -o dspcg.o dspcg.c:115:44: warning: variable 'iters' set but not used [-Wunused-but-set-variable] 115 | int i, j, nfaces, nfree, inc = 1, infotr, iters = 0, itertr; | ^ dspcg.c:116:40: warning: variable 'alpha' set but not used [-Wunused-but-set-variable] 116 | double gfnorm, gfnormf, stol = 1e-16, alpha; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dtron.c -o dtron.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dtrpcg.c -o dtrpcg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dtrqsol.c -o dtrqsol.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c esa.cpp -o esa.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c expdecayweight.cpp -o expdecayweight.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c inductionsort.cpp -o inductionsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c kspectrumweight.cpp -o kspectrumweight.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c lcp.cpp -o lcp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c misc.c -o misc.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c msufsort.cpp -o msufsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c solvebqp.c -o solvebqp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c stringk.c -o stringk.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stringkernel.cpp -o stringkernel.o In file included from stringkernel.cpp:53: ./stringkernel.h:106:7: warning: private field '_verb' is not used [-Wunused-private-field] 106 | int _verb; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c svm.cpp -o svm.o svm.cpp:1474:6: warning: variable 'iter' set but not used [-Wunused-but-set-variable] 1474 | int iter = 0, counter = min(l*2, 2000) + 1; | ^ svm.cpp:1549:9: warning: variable 'obj' set but not used [-Wunused-but-set-variable] 1549 | double obj = 0; | ^ svm.cpp:1556:6: warning: variable 'nSV' set but not used [-Wunused-but-set-variable] 1556 | int nSV = 0, nFREE = 0; | ^ svm.cpp:1556:15: warning: variable 'nFREE' set but not used [-Wunused-but-set-variable] 1556 | int nSV = 0, nFREE = 0; | ^ svm.cpp:1857:6: warning: variable 'iter' set but not used [-Wunused-but-set-variable] 1857 | int iter = 0; | ^ svm.cpp:2152:6: warning: 'Solver_B_linear::Solve' hides overloaded virtual function [-Woverloaded-virtual] 2152 | int Solve(int l, svm_node * const * x_, double *b_, schar *y_, | ^ svm.cpp:1709:15: note: hidden overloaded virtual function 'Solver_B::Solve' declared here: different number of parameters (11 vs 12) 1709 | virtual void Solve(int l, const Kernel& Q, double *b_, schar *y_, | ^ svm.cpp:2431:7: warning: 'Solver_MB::Solve' hides overloaded virtual function [-Woverloaded-virtual] 2431 | void Solve(int l, const Kernel& Q, double lin, double *alpha_, | ^ svm.cpp:1709:15: note: hidden overloaded virtual function 'Solver_B::Solve' declared here: different number of parameters (11 vs 12) 1709 | virtual void Solve(int l, const Kernel& Q, double *b_, schar *y_, | ^ svm.cpp:2665:6: warning: variable 'iter' set but not used [-Wunused-but-set-variable] 2665 | int iter = 0; | ^ svm.cpp:3626:7: warning: variable 'totaliter' set but not used [-Wunused-but-set-variable] 3626 | int totaliter = 0; | ^ svm.cpp:3715:7: warning: variable 'totaliter' set but not used [-Wunused-but-set-variable] 3715 | int totaliter = 0; | ^ svm.cpp:3758:9: warning: variable 'sum_alpha' set but not used [-Wunused-but-set-variable] 3758 | double sum_alpha = 0; | ^ svm.cpp:3888:17: warning: variable 's' set but not used [-Wunused-but-set-variable] 3888 | const char* s; | ^ svm.cpp:4110:11: warning: variable 'sum_alpha' set but not used [-Wunused-but-set-variable] 4110 | double sum_alpha = 0; | ^ svm.cpp:4189:17: warning: variable 's' set but not used [-Wunused-but-set-variable] 4189 | const char* s; | ^ 14 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c wkasailcp.cpp -o wkasailcp.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c wmsufsort.cpp -o wmsufsort.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o kernlab.so brweight.o ctable.o cweight.o dbreakpt.o dcauchy.o dgpnrm.o dgpstep.o dprecond.o dprsrch.o dspcg.o dtron.o dtrpcg.o dtrqsol.o esa.o expdecayweight.o inductionsort.o init.o kspectrumweight.o lcp.o misc.o msufsort.o solvebqp.o stringk.o stringkernel.o svm.o wkasailcp.o wmsufsort.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYnzAik/R.INSTALL35cf3e771375c5/kernlab/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-kernlab/00new/kernlab/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘pattern’ in package ‘kernlab’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kernlab) * installing *source* package ‘S4Vectors’ ... ** this is package ‘S4Vectors’ version ‘0.44.0’ ** package ‘S4Vectors’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppafpmJ/R.INSTALL35f5d27367f9ba/S4Vectors/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c AEbufs.c -o AEbufs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DataFrame_class.c -o DataFrame_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Hits_class.c -o Hits_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c LLint_class.c -o LLint_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c List_class.c -o List_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_S4Vectors.c -o R_init_S4Vectors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rle_class.c -o Rle_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rle_utils.c -o Rle_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SEXP_utils.c -o SEXP_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SimpleList_class.c -o SimpleList_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c character_utils.c -o character_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c eval_utils.c -o eval_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash_utils.c -o hash_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integer_utils.c -o integer_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c logical_utils.c -o logical_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c map_ranges_to_runs.c -o map_ranges_to_runs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c raw_utils.c -o raw_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c safe_arithm.c -o safe_arithm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort_utils.c -o sort_utils.o sort_utils.c:263:13: warning: unused function 'sort_uchar_array' [-Wunused-function] 263 | static void sort_uchar_array(unsigned char *x, int nelt, int desc) | ^~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c subsetting_utils.c -o subsetting_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vector_utils.c -o vector_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o S4Vectors.so AEbufs.o DataFrame_class.o Hits_class.o LLint_class.o List_class.o R_init_S4Vectors.o Rle_class.o Rle_utils.o SEXP_utils.o SimpleList_class.o anyMissing.o character_utils.o eval_utils.o hash_utils.o integer_utils.o logical_utils.o map_ranges_to_runs.o raw_utils.o safe_arithm.o sort_utils.o subsetting_utils.o vector_utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppafpmJ/R.INSTALL35f5d27367f9ba/S4Vectors/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-S4Vectors/00new/S4Vectors/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘normalizeSingleBracketReplacementValue’ with signature ‘"List"’: no definition for class “List” Creating a new generic function for ‘unname’ in package ‘S4Vectors’ Creating a new generic function for ‘expand.grid’ in package ‘S4Vectors’ Creating a new generic function for ‘findMatches’ in package ‘S4Vectors’ Creating a generic function for ‘setequal’ from package ‘base’ in package ‘S4Vectors’ in method for ‘coerce’ with signature ‘"Hits","DFrame"’: no definition for class “DFrame” Creating a generic function for ‘as.factor’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘tabulate’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘cov’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘cor’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘substr’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘substring’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘chartr’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘tolower’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘toupper’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘sub’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘gsub’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘nlevels’ from package ‘base’ in package ‘S4Vectors’ in method for ‘coerce’ with signature ‘"data.table","DFrame"’: no definition for class “data.table” Creating a generic function for ‘complete.cases’ from package ‘stats’ in package ‘S4Vectors’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (S4Vectors) begin installing package ‘IRanges’ begin installing package ‘MsCoreUtils’ begin installing package ‘UCSC.utils’ * installing *source* package ‘vctrs’ ... ** this is package ‘vctrs’ version ‘0.6.5’ ** package ‘vctrs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXxoycI/R.INSTALL36156f3a6afe51/vctrs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-lazy-character.c -o altrep-lazy-character.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-rle.c -o altrep-rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep.c -o altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg-counter.c -o arg-counter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg.c -o arg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assert.c -o assert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c bind.c -o bind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c-unchop.c -o c-unchop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c.c -o c.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callables.c -o callables.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-bare.c -o cast-bare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-dispatch.c -o cast-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast.c -o cast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c compare.c -o compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c complete.c -o complete.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dictionary.c -o dictionary.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dim.c -o dim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c empty.c -o empty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c equal.c -o equal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c expand.c -o expand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fill.c -o fill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c globals.c -o globals.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c group.c -o group.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c growable.c -o growable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interval.c -o interval.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match-joint.c -o match-joint.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match.c -o match.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c missing.c -o missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c names.c -o names.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-collate.c -o order-collate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-groups.c -o order-groups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-sortedness.c -o order-sortedness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-truelength.c -o order-truelength.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order.c -o order.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c poly-op.c -o poly-op.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy-restore.c -o proxy-restore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy.c -o proxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype-common.c -o ptype-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype.c -o ptype.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2-dispatch.c -o ptype2-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2.c -o ptype2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rank.c -o rank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rep.c -o rep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang-dev.c -o rlang-dev.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c runs.c -o runs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c set.c -o set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c shape.c -o shape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size-common.c -o size-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size.c -o size.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-array.c -o slice-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign-array.c -o slice-assign-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign.c -o slice-assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-chop.c -o slice-chop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-interleave.c -o slice-interleave.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice.c -o slice.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript-loc.c -o subscript-loc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript.c -o subscript.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c translate.c -o translate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-data-frame.c -o type-data-frame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-date-time.c -o type-date-time.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-factor.c -o type-factor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-info.c -o type-info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-integer64.c -o type-integer64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-tibble.c -o type-tibble.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2-s3.c -o typeof2-s3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2.c -o typeof2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unspecified.c -o unspecified.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils-dispatch.c -o utils-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vctrs-core.c -o vctrs-core.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o init.o interval.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order-truelength.o order.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o vctrs-core.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXxoycI/R.INSTALL36156f3a6afe51/vctrs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) begin installing package ‘hms’ begin installing package ‘pillar’ begin installing package ‘tidyselect’ begin installing package ‘purrr’ begin installing package ‘igraph’ * installing *source* package ‘hms’ ... ** this is package ‘hms’ version ‘1.1.3’ ** package ‘hms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hms) begin installing package ‘progress’ * installing *source* package ‘BiocParallel’ ... ** this is package ‘BiocParallel’ version ‘1.40.0’ ** package ‘BiocParallel’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking for library containing shm_open... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/mman.h... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwJzi2d/R.INSTALL361d7c34deb30c/BiocParallel/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/BH/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/BH/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ipcmutex.cpp -o ipcmutex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o BiocParallel.so cpp11.o ipcmutex.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwJzi2d/R.INSTALL361d7c34deb30c/BiocParallel/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-BiocParallel/00new/BiocParallel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocParallel) * installing *source* package ‘tidyselect’ ... ** this is package ‘tidyselect’ version ‘1.2.1’ ** package ‘tidyselect’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package ‘UCSC.utils’ ... ** this is package ‘UCSC.utils’ version ‘1.2.0’ ** package ‘UCSC.utils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (UCSC.utils) * installing *source* package ‘progress’ ... ** this is package ‘progress’ version ‘1.2.3’ ** package ‘progress’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (progress) * installing *source* package ‘purrr’ ... ** this is package ‘purrr’ version ‘1.0.2’ ** package ‘purrr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpY7or1C/R.INSTALL36289141e0643/purrr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c backports.c -o backports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c flatten.c -o flatten.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c map.c -o map.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c pluck.c -o pluck.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o purrr.so backports.o cleancall.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpY7or1C/R.INSTALL36289141e0643/purrr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-purrr/00new/purrr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (purrr) * installing *source* package ‘MsCoreUtils’ ... ** this is package ‘MsCoreUtils’ version ‘1.18.0’ ** package ‘MsCoreUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmhL02B/R.INSTALL3628317bc1c2dc/MsCoreUtils/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c between.c -o between.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c closest.c -o closest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c impNeighbourAvg.c -o impNeighbourAvg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c join.c -o join.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c localMaxima.c -o localMaxima.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lowerConvexHull.c -o lowerConvexHull.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c maxi.c -o maxi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c morphologicalFilters.c -o morphologicalFilters.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c snip.c -o snip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sumi.c -o sumi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c which.c -o which.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o MsCoreUtils.so between.o closest.o impNeighbourAvg.o init.o join.o localMaxima.o lowerConvexHull.o maxi.o morphologicalFilters.o snip.o sumi.o which.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmhL02B/R.INSTALL3628317bc1c2dc/MsCoreUtils/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-MsCoreUtils/00new/MsCoreUtils/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsCoreUtils) begin installing package ‘MetaboCoreUtils’ * installing *source* package ‘pillar’ ... ** this is package ‘pillar’ version ‘1.10.1’ ** package ‘pillar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pillar) begin installing package ‘tibble’ * installing *source* package ‘magick’ ... ** this is package ‘magick’ version ‘2.8.5’ ** package ‘magick’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 Using PKG_LIBS=-lMagick++-7.Q16 -lMagickWand-7.Q16 -lMagickCore-7.Q16 ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp79uwv9/R.INSTALL3612585bb37601/magick/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c animation.cpp -o animation.o In file included from animation.cpp:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c attributes.cpp -o attributes.o In file included from attributes.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c base.cpp -o base.o In file included from base.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c color.cpp -o color.o In file included from color.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c composite.cpp -o composite.o In file included from composite.cpp:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c config.cc -o config.o In file included from config.cc:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c convolve.cpp -o convolve.o In file included from convolve.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c device.cpp -o device.o In file included from device.cpp:9: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c edges.cpp -o edges.o In file included from edges.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c edit.cpp -o edit.o In file included from edit.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fonts.cpp -o fonts.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c options.cpp -o options.o In file included from options.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c properties.cpp -o properties.o In file included from properties.cpp:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c resize.cpp -o resize.o In file included from resize.cpp:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c segment.cpp -o segment.o In file included from segment.cpp:1: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu/ImageMagick-7 -I/usr/include/ImageMagick-7 -fopenmp -DMAGICKCORE_HDRI_ENABLE=0 -DMAGICKCORE_QUANTUM_DEPTH=16 -DMAGICKCORE_CHANNEL_MASK_DEPTH=32 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c transformations.cpp -o transformations.o In file included from transformations.cpp:6: ./magick_types.h:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :7:9: note: previous definition is here 7 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o magick.so RcppExports.o animation.o attributes.o base.o color.o composite.o config.o convolve.o device.o edges.o edit.o fonts.o options.o properties.o resize.o segment.o transformations.o -lMagick++-7.Q16 -lMagickWand-7.Q16 -lMagickCore-7.Q16 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp79uwv9/R.INSTALL3612585bb37601/magick/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-magick/00new/magick/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magick) begin installing package ‘animation’ * installing *source* package ‘tibble’ ... ** this is package ‘tibble’ version ‘3.2.1’ ** package ‘tibble’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4OkYBJ/R.INSTALL362f9f39ae8520/tibble/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attributes.c -o attributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matrixToDataFrame.c -o matrixToDataFrame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4OkYBJ/R.INSTALL362f9f39ae8520/tibble/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tibble/00new/tibble/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibble) begin installing package ‘ggplot2’ begin installing package ‘dplyr’ * installing *source* package ‘MetaboCoreUtils’ ... ** this is package ‘MetaboCoreUtils’ version ‘1.14.0’ ** package ‘MetaboCoreUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MetaboCoreUtils) * installing *source* package ‘stringi’ ... ** this is package ‘stringi’ version ‘1.8.4’ ** package ‘stringi’ successfully unpacked and MD5 sums checked ** using staged installation checking for R_HOME... /home/hornik/tmp/R-d-clang-xtra checking for R... /home/hornik/tmp/R-d-clang-xtra/bin/R checking for endianness... little checking for cat... /usr/bin/cat checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking whether the C++ compiler supports the 'long long' type... yes checking whether the compiler implements namespaces... yes checking whether the compiler supports the Standard Template Library... yes checking whether std::map is available... yes checking for pkg-config... /usr/bin/pkg-config checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 72.1 checking for ICU4C >= 61... yes checking for additional CPPFLAGS, LDFLAGS, and LIBS required... done checking whether an ICU4C-based project can be built... yes checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes checking the capabilities of the ICU data library (ucol)... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for elf.h... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/uconfig_local.h config.status: creating src/install.libs.R *** stringi configure summary: ICU_FOUND=1 STRINGI_CXXSTD= STRINGI_CXXFLAGS= -fpic STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H STRINGI_LDFLAGS= -L/usr/lib/x86_64-linux-gnu STRINGI_LIBS= -licui18n -licuuc -licudata *** Compiler settings used: CXX=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 LD=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 CXXFLAGS=-g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw CPPFLAGS=-I/usr/local/include LDFLAGS= LIBS= ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXOoD6y/R.INSTALL35bf195a6f8203/stringi/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_brkiter.cpp -o stri_brkiter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_collator.cpp -o stri_collator.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_common.cpp -o stri_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_compare.cpp -o stri_compare.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_base.cpp -o stri_container_base.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listint.cpp -o stri_container_listint.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listraw.cpp -o stri_container_listraw.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listutf8.cpp -o stri_container_listutf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_regex.cpp -o stri_container_regex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_usearch.cpp -o stri_container_usearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf16.cpp -o stri_container_utf16.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf8.cpp -o stri_container_utf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_detection.cpp -o stri_encoding_detection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_management.cpp -o stri_encoding_management.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_escape.cpp -o stri_escape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_exception.cpp -o stri_exception.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_ICU_settings.cpp -o stri_ICU_settings.o In file included from stri_ICU_settings.cpp:37: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:381:12: note: previous definition is here 381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_join.cpp -o stri_join.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_length.cpp -o stri_length.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_pad.cpp -o stri_pad.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_prepare_arg.cpp -o stri_prepare_arg.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_random.cpp -o stri_random.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_reverse.cpp -o stri_reverse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_count.cpp -o stri_search_class_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_detect.cpp -o stri_search_class_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_extract.cpp -o stri_search_class_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_locate.cpp -o stri_search_class_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_replace.cpp -o stri_search_class_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_split.cpp -o stri_search_class_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_subset.cpp -o stri_search_class_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_trim.cpp -o stri_search_class_trim.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_common.cpp -o stri_search_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_count.cpp -o stri_search_coll_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_split.cpp -o stri_search_coll_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_in.cpp -o stri_search_in.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_other_split.cpp -o stri_search_other_split.o stri_search_other_split.cpp:202:24: warning: variable 'k' set but not used [-Wunused-but-set-variable] 202 | R_len_t jlast, k=1; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_count.cpp -o stri_search_regex_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_match.cpp -o stri_search_regex_match.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_split.cpp -o stri_search_regex_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sort.cpp -o stri_sort.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sprintf.cpp -o stri_sprintf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_stats.cpp -o stri_stats.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_string8.cpp -o stri_string8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_stringi.cpp -o stri_stringi.o In file included from stri_stringi.cpp:39: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:381:12: note: previous definition is here 381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sub.cpp -o stri_sub.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_test.cpp -o stri_test.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_zone.cpp -o stri_time_zone.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_calendar.cpp -o stri_time_calendar.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_symbols.cpp -o stri_time_symbols.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_format.cpp -o stri_time_format.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_casemap.cpp -o stri_trans_casemap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_other.cpp -o stri_trans_other.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_normalization.cpp -o stri_trans_normalization.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_ucnv.cpp -o stri_ucnv.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_uloc.cpp -o stri_uloc.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_utils.cpp -o stri_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_wrap.cpp -o stri_wrap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXOoD6y/R.INSTALL35bf195a6f8203/stringi/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-stringi/00new/stringi ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringi) begin installing package ‘stringr’ * installing *source* package ‘animation’ ... ** this is package ‘animation’ version ‘2.7’ ** package ‘animation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (animation) * installing *source* package ‘stringr’ ... ** this is package ‘stringr’ version ‘1.5.1’ ** package ‘stringr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringr) begin installing package ‘reshape2’ * installing *source* package ‘reshape2’ ... ** this is package ‘reshape2’ version ‘1.4.4’ ** package ‘reshape2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpV2fi0J/R.INSTALL363a05e82d246/reshape2/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c melt.cpp -o melt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o reshape2.so RcppExports.o melt.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpV2fi0J/R.INSTALL363a05e82d246/reshape2/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-reshape2/00new/reshape2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reshape2) * installing *source* package ‘testthat’ ... ** this is package ‘testthat’ version ‘3.2.2’ ** package ‘testthat’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCkWQqe/R.INSTALL361f98cfc5de1/testthat/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reassign.c -o reassign.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-catch.cpp -o test-catch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-example.cpp -o test-example.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-runner.cpp -o test-runner.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCkWQqe/R.INSTALL361f98cfc5de1/testthat/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-testthat/00new/testthat/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (testthat) * installing *source* package ‘dplyr’ ... ** this is package ‘dplyr’ version ‘1.1.4’ ** package ‘dplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPIPLJk/R.INSTALL3636d34e4b157a/dplyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c chop.cpp -o chop.o In file included from chop.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c filter.cpp -o filter.o In file included from filter.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c funs.cpp -o funs.o In file included from funs.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c group_by.cpp -o group_by.o In file included from group_by.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c group_data.cpp -o group_data.o In file included from group_data.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imports.cpp -o imports.o In file included from imports.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mask.cpp -o mask.o In file included from mask.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mutate.cpp -o mutate.o In file included from mutate.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c reconstruct.cpp -o reconstruct.o In file included from reconstruct.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c slice.cpp -o slice.o In file included from slice.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c summarise.cpp -o summarise.o In file included from summarise.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPIPLJk/R.INSTALL3636d34e4b157a/dplyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) begin installing package ‘tidyr’ * installing *source* package ‘httpuv’ ... ** this is package ‘httpuv’ version ‘1.6.15’ ** package ‘httpuv’ successfully unpacked and MD5 sums checked ** using staged installation ** Using libuv found by pkg-config in /usr ** PKG_CFLAGS= ** PKG_LIBS=-luv -lpthread -ldl -lrt ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLpcNCu/R.INSTALL36253b26153873/httpuv/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c callback.cpp -o callback.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c callbackqueue.cpp -o callbackqueue.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c filedatasource-unix.cpp -o filedatasource-unix.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c filedatasource-win.cpp -o filedatasource-win.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fs.cpp -o fs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c gzipdatasource.cpp -o gzipdatasource.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c http.cpp -o http.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c httprequest.cpp -o httprequest.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c httpresponse.cpp -o httpresponse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c httpuv.cpp -o httpuv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mime.cpp -o mime.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c socket.cpp -o socket.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c staticpath.cpp -o staticpath.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c thread.cpp -o thread.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timegm.cpp -o timegm.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c utils.cpp -o utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c uvutil.cpp -o uvutil.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c webapplication.cpp -o webapplication.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c websockets-base.cpp -o websockets-base.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c websockets-hixie76.cpp -o websockets-hixie76.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c websockets-hybi03.cpp -o websockets-hybi03.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c websockets-ietf.cpp -o websockets-ietf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c websockets.cpp -o websockets.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c winutils.cpp -o winutils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c http-parser/http_parser.c -o http-parser/http_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c sha1/sha1.c -o sha1/sha1.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c base64/base64.cpp -o base64/base64.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o httpuv.so RcppExports.o callback.o callbackqueue.o filedatasource-unix.o filedatasource-win.o fs.o gzipdatasource.o http.o httprequest.o httpresponse.o httpuv.o md5.o mime.o socket.o staticpath.o thread.o timegm.o utils.o uvutil.o webapplication.o websockets-base.o websockets-hixie76.o websockets-hybi03.o websockets-ietf.o websockets.o winutils.o -luv -lpthread -ldl -lrt ./http-parser/http_parser.o ./sha1/sha1.o ./base64/base64.o -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLpcNCu/R.INSTALL36253b26153873/httpuv/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-httpuv/00new/httpuv/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (httpuv) * installing *source* package ‘tidyr’ ... ** this is package ‘tidyr’ version ‘1.3.1’ ** package ‘tidyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHplk7A/R.INSTALL36458d40094a72/tidyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c melt.cpp -o melt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c simplifyPieces.cpp -o simplifyPieces.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tidyr.so cpp11.o melt.o simplifyPieces.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHplk7A/R.INSTALL36458d40094a72/tidyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) * installing *source* package ‘ggplot2’ ... ** this is package ‘ggplot2’ version ‘3.5.1’ ** package ‘ggplot2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplot2) begin installing package ‘vsn’ * installing *source* package ‘vsn’ ... ** this is package ‘vsn’ version ‘3.74.0’ ** package ‘vsn’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1P9NQQ/R.INSTALL364d9ca27aaf6/vsn/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vsn.c -o vsn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vsn2.c -o vsn2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vsn.so init.o vsn.o vsn2.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1P9NQQ/R.INSTALL364d9ca27aaf6/vsn/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vsn/00new/vsn/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vsn) * installing *source* package ‘sass’ ... ** this is package ‘sass’ version ‘0.4.9’ ** package ‘sass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs /home/hornik/tmp/R-d-clang-xtra/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' Makevars:12: warning: ignoring old recipe for target 'shlib-clean' using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4zvdsC/R.INSTALL3618804e8341dd/sass/src' /home/hornik/tmp/R-d-clang-xtra/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' Makevars:12: warning: ignoring old recipe for target 'shlib-clean' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compile.c -o compile.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o MAKEFLAGS= CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer" CFLAGS="-g -O3 -Wall -pedantic" CXX="clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17" AR="ar" LDFLAGS="-Wl,-O1" make -C libsass make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmp4zvdsC/R.INSTALL3618804e8341dd/sass/src/libsass' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/position.o src/position.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/lexer.o src/lexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser.o src/parser.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser_selectors.o src/parser_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/prelexer.o src/prelexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval.o src/eval.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval_selectors.o src/eval_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/expand.o src/expand.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/listize.o src/listize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/cssize.o src/cssize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extender.o src/extender.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extension.o src/extension.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/stylesheet.o src/stylesheet.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/output.o src/output.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/inspect.o src/inspect.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/emitter.o src/emitter.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp mkdir lib ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o a - src/cencode.o a - src/ast.o a - src/ast_values.o a - src/ast_supports.o a - src/ast_sel_cmp.o a - src/ast_sel_unify.o a - src/ast_sel_super.o a - src/ast_sel_weave.o a - src/ast_selectors.o a - src/context.o a - src/constants.o a - src/fn_utils.o a - src/fn_miscs.o a - src/fn_maps.o a - src/fn_lists.o a - src/fn_colors.o a - src/fn_numbers.o a - src/fn_strings.o a - src/fn_selectors.o a - src/color_maps.o a - src/environment.o a - src/ast_fwd_decl.o a - src/bind.o a - src/file.o a - src/util.o a - src/util_string.o a - src/json.o a - src/units.o a - src/values.o a - src/plugins.o a - src/source.o a - src/position.o a - src/lexer.o a - src/parser.o a - src/parser_selectors.o a - src/prelexer.o a - src/eval.o a - src/eval_selectors.o a - src/expand.o a - src/listize.o a - src/cssize.o a - src/extender.o a - src/extension.o a - src/stylesheet.o a - src/output.o a - src/inspect.o a - src/emitter.o a - src/check_nesting.o a - src/remove_placeholders.o a - src/sass.o a - src/sass_values.o a - src/sass_context.o a - src/sass_functions.o a - src/sass2scss.o a - src/backtrace.o a - src/operators.o a - src/ast2c.o a - src/c2ast.o a - src/to_value.o a - src/source_map.o a - src/error_handling.o a - src/memory/allocator.o a - src/memory/shared_ptr.o a - src/utf8_string.o a - src/base64vlq.o make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4zvdsC/R.INSTALL3618804e8341dd/sass/src/libsass' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sass.so compile.o init.o ./libsass/lib/libsass.a -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4zvdsC/R.INSTALL3618804e8341dd/sass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sass/00new/sass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sass) begin installing package ‘bslib’ * installing *source* package ‘IRanges’ ... ** this is package ‘IRanges’ version ‘2.40.1’ ** package ‘IRanges’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7A5Rbf/R.INSTALL36282f48f9fb61/IRanges/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedAtomicList_utils.c -o CompressedAtomicList_utils.o In file included from CompressedAtomicList_utils.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedIRangesList_class.c -o CompressedIRangesList_class.o In file included from CompressedIRangesList_class.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedList_class.c -o CompressedList_class.o In file included from CompressedList_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Grouping_class.c -o Grouping_class.o In file included from Grouping_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IPosRanges_comparison.c -o IPosRanges_comparison.o In file included from IPosRanges_comparison.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_class.c -o IRanges_class.o In file included from IRanges_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_constructor.c -o IRanges_constructor.o In file included from IRanges_constructor.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NCList.c -o NCList.o In file included from NCList.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void NCList.c:114:56: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 114 | static NCListWalkingStackElt *pop_NCListWalkingStackElt() | ^ | void NCList.c:122:57: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 122 | static NCListWalkingStackElt *peek_NCListWalkingStackElt() | ^ | void NCList.c:127:40: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 127 | static void extend_NCList_walking_stack() | ^ | void NCList.c:172:41: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 172 | static const NCList *move_to_right_uncle() | ^ | void NCList.c:225:36: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 225 | static const NCList *next_bottom_up() | ^ | void NCList.c:356:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 356 | SEXP C_new_NCList() | ^ | void NCList.c:446:41: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 446 | static void extend_NCList_building_stack() | ^ | void NCList.c:202:22: warning: unused function 'next_top_down' [-Wunused-function] 202 | static const NCList *next_top_down(const NCList *nclist) | ^~~~~~~~~~~~~ NCList.c:1173:13: warning: function 'NCList_get_y_overlaps_rec' is not needed and will not be emitted [-Wunneeded-internal-declaration] 1173 | static void NCList_get_y_overlaps_rec(const NCList *x_nclist, | ^~~~~~~~~~~~~~~~~~~~~~~~~ 10 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_IRanges.c -o R_init_IRanges.o In file included from R_init_IRanges.c:1: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Ranges_class.c -o Ranges_class.o In file included from Ranges_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RleViews_utils.c -o RleViews_utils.o In file included from RleViews_utils.c:1: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SimpleIRangesList_class.c -o SimpleIRangesList_class.o In file included from SimpleIRangesList_class.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coverage_methods.c -o coverage_methods.o In file included from coverage_methods.c:11: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c extractListFragments.c -o extractListFragments.o In file included from extractListFragments.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c inter_range_methods.c -o inter_range_methods.o In file included from inter_range_methods.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o IRanges.so CompressedAtomicList_utils.o CompressedIRangesList_class.o CompressedList_class.o Grouping_class.o IPosRanges_comparison.o IRanges_class.o IRanges_constructor.o NCList.o R_init_IRanges.o Ranges_class.o RleViews_utils.o S4Vectors_stubs.o SimpleIRangesList_class.o coverage_methods.o extractListFragments.o inter_range_methods.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7A5Rbf/R.INSTALL36282f48f9fb61/IRanges/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-IRanges/00new/IRanges/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘drop’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘IRanges’ Creating a generic function for ‘chartr’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘toupper’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘tolower’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘sub’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘gsub’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘startsWith’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘endsWith’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘IRanges’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IRanges) begin installing package ‘XVector’ begin installing package ‘S4Arrays’ begin installing package ‘GenomeInfoDb’ begin installing package ‘Spectra’ * installing *source* package ‘bslib’ ... ** this is package ‘bslib’ version ‘0.8.0’ ** package ‘bslib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bslib) begin installing package ‘shiny’ begin installing package ‘rmarkdown’ * installing *source* package ‘rmarkdown’ ... ** this is package ‘rmarkdown’ version ‘2.29’ ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) begin installing package ‘htmlwidgets’ * installing *source* package ‘GenomeInfoDb’ ... ** this is package ‘GenomeInfoDb’ version ‘1.42.1’ ** package ‘GenomeInfoDb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomeInfoDb) * installing *source* package ‘htmlwidgets’ ... ** this is package ‘htmlwidgets’ version ‘1.6.4’ ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmlwidgets) begin installing package ‘DT’ begin installing package ‘plotly’ * installing *source* package ‘XVector’ ... ** this is package ‘XVector’ version ‘0.46.0’ ** package ‘XVector’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpR01A1p/R.INSTALL3657c42127834/XVector/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o In file included from Ocopy_byteblocks.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RDS_random_access.c -o RDS_random_access.o In file included from RDS_random_access.c:7: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void RDS_random_access.c:793:11: warning: variable 'x_type' set but not used [-Wunused-but-set-variable] 793 | SEXPTYPE x_type; | ^ RDS_random_access.c:796:18: warning: unused variable 'ans' [-Wunused-variable] 796 | SEXP subscript, ans; | ^~~ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_XVector.c -o R_init_XVector.o In file included from R_init_XVector.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedDouble_class.c -o SharedDouble_class.o In file included from SharedDouble_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedInteger_class.c -o SharedInteger_class.o In file included from SharedInteger_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedRaw_class.c -o SharedRaw_class.o In file included from SharedRaw_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void SharedRaw_class.c:396:13: warning: variable 'src_tag' set but not used [-Wunused-but-set-variable] 396 | SEXP dest, src_tag; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedVector_class.c -o SharedVector_class.o In file included from SharedVector_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void SharedVector_class.c:69:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 69 | SEXP externalptr_new() | ^ | void SharedVector_class.c:110:31: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 110 | Rprintf(" x address: %p\n", x); | ~~ ^ SharedVector_class.c:114:41: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 114 | Rprintf(" R_ExternalPtrTag(x): %p\n", s); | ~~ ^ SharedVector_class.c:118:47: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 118 | Rprintf(" R_ExternalPtrProtected(x): %p\n", s); | ~~ ^ 5 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XDouble_class.c -o XDouble_class.o In file included from XDouble_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XInteger_class.c -o XInteger_class.o In file included from XInteger_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XRawList_comparison.c -o XRawList_comparison.o In file included from XRawList_comparison.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XRaw_class.c -o XRaw_class.o In file included from XRaw_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XVectorList_class.c -o XVectorList_class.o In file included from XVectorList_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XVector_class.c -o XVector_class.o In file included from XVector_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c io_utils.c -o io_utils.o In file included from io_utils.c:7: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c slice_methods.c -o slice_methods.o In file included from slice_methods.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vector_copy.c -o vector_copy.o In file included from vector_copy.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c view_summarization_methods.c -o view_summarization_methods.o In file included from view_summarization_methods.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o XVector.so IRanges_stubs.o Ocopy_byteblocks.o RDS_random_access.o R_init_XVector.o S4Vectors_stubs.o SharedDouble_class.o SharedInteger_class.o SharedRaw_class.o SharedVector_class.o XDouble_class.o XInteger_class.o XRawList_comparison.o XRaw_class.o XVectorList_class.o XVector_class.o io_utils.o slice_methods.o vector_copy.o view_summarization_methods.o -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpR01A1p/R.INSTALL3657c42127834/XVector/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-XVector/00new/XVector/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XVector) begin installing package ‘GenomicRanges’ * installing *source* package ‘S4Arrays’ ... ** this is package ‘S4Arrays’ version ‘1.6.0’ ** package ‘S4Arrays’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBNyY9f/R.INSTALL3657c744b1f042/S4Arrays/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_S4Arrays.c -o R_init_S4Arrays.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c abind.c -o abind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c array_selection.c -o array_selection.o array_selection.c:91:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 91 | static char *errmsg_buf() | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dim_tuning_utils.c -o dim_tuning_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowsum.c -o rowsum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o S4Arrays.so R_init_S4Arrays.o S4Vectors_stubs.o abind.o array_selection.o dim_tuning_utils.o rowsum.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBNyY9f/R.INSTALL3657c744b1f042/S4Arrays/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-S4Arrays/00new/S4Arrays/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘rowsum’ in package ‘S4Arrays’ Creating a new generic function for ‘abind’ in package ‘S4Arrays’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (S4Arrays) begin installing package ‘SparseArray’ * installing *source* package ‘Spectra’ ... ** this is package ‘Spectra’ version ‘1.16.0’ ** package ‘Spectra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘entropy’ in package ‘Spectra’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Spectra) * installing *source* package ‘DT’ ... ** this is package ‘DT’ version ‘0.33’ ** package ‘DT’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DT) * installing *source* package ‘Rhdf5lib’ ... ** this is package ‘Rhdf5lib’ version ‘1.28.0’ ** package ‘Rhdf5lib’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to enable C11 features... none needed checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed COMPILER = clang-19 checking whether C compiler accepts -w... yes checking whether to use -Wl,-rpath setting... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for zlib.h... yes ON_BUILDER=false ON_BUILDER=false checking for szlib.h... yes checking for libaec.h... yes checking for SZ_BufftoBuffCompress in -lsz... yes checking for aec_buffer_encode in -lsz... yes checking for curl/curl.h... yes checking for openssl/evp.h... yes checking for openssl/hmac.h... yes checking for openssl/sha.h... yes checking for curl_global_init in -lcurl... yes checking for EVP_sha256 in -lcrypto... yes S3_VFD=--enable-ros3-vfd configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src' gunzip -dc hdf5small_cxx_hl_1.10.7.tar.gz | tar xf -; cd hdf5; \ ./configure --with-pic --enable-shared=no --enable-cxx --enable-hl \ --enable-tests=no --enable-tools=no \ --with-szlib=yes --with-zlib=yes \ --enable-ros3-vfd \ --enable-sharedlib-rpath \ CC='clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer' CXX='clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17' \ CPPFLAGS='-I/usr/local/include' \ CFLAGS='-g -O3 -Wall -pedantic -w -fpic' \ CXXFLAGS='-w -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -fpic' \ AR='ar' RANLIB='ranlib' \ LDFLAGS='-Wl,-O1'; \ make lib checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking shell variables initial values... done checking if basename works... yes checking if xargs works... yes checking for cached host... none checking for config x86_64-pc-linux-gnu... no checking for config x86_64-pc-linux-gnu... no checking for config pc-linux-gnu... no checking for config pc-linux-gnu... no checking for config x86_64-linux-gnu... no checking for config x86_64-linux-gnu... no checking for config x86_64-pc... no checking for config linux-gnu... found compiler 'clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer' is clang-19.1.6 compiler 'gfortran' is GNU gfortran-14.2.0 compiler 'clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti 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GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for shl_load... no checking for shl_load in -ldld... no checking for dlopen... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking how to run the C++ preprocessor... clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -E checking for ld used by clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to produce PIC... -fPIC -DPIC checking if clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 PIC flag -fPIC -DPIC works... yes checking if clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 static flag -static works... no checking if clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 supports -c -o file.o... yes checking if clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 supports -c -o file.o... (cached) yes checking whether the clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if we should install only statically linked executables... no checking if -Wl,-rpath should be used to link shared libs in nondefault directories... yes checking for ceil in -lm... yes checking for dlopen in -ldl... yes checking for egrep... (cached) /usr/bin/grep -E checking for sys/resource.h... yes checking for sys/time.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/ioctl.h... yes checking for sys/stat.h... (cached) yes checking for sys/socket.h... yes checking for sys/types.h... 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checking size of uint_least64_t... 8 checking size of int_fast64_t... 8 checking size of uint_fast64_t... 8 checking size of size_t... 8 checking size of ssize_t... 8 checking size of ptrdiff_t... 8 checking size of off_t... 8 checking size of bool... 1 checking size of time_t... 8 checking if dev_t is scalar... yes checking for dmalloc library... suppressed checking for zlib.h... yes checking for compress2 in -lz... yes checking for compress2... yes checking for szlib.h... yes checking for libaec.h... yes checking for aec_encode in -laec... yes checking for SZ_BufftoBuffCompress in -lsz... yes checking for szlib encoder... no checking for thread safe support... no checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer options needed to detect all undeclared functions... none needed checking whether CLOCK_MONOTONIC is declared... yes checking for tm_gmtoff in struct tm... yes checking for global timezone variable... yes checking for st_blocks in struct stat... no checking for _getvideoconfig... no checking for gettextinfo... no checking for GetConsoleScreenBufferInfo... no checking for getpwuid... yes checking for _scrsize... no checking for ioctl... yes checking for struct videoconfig... no checking for struct text_info... no checking for TIOCGWINSZ... yes checking for TIOCGETD... yes checking for library containing clock_gettime... none required checking for alarm... yes checking for clock_gettime... yes checking for difftime... yes checking for fcntl... yes checking for flock... yes checking for fork... yes checking for frexpf... yes checking for frexpl... yes checking for gethostname... yes checking for getrusage... yes checking for gettimeofday... yes checking for lstat... yes checking for rand_r... yes checking for random... yes checking for setsysinfo... no checking for signal... yes checking for longjmp... yes checking for setjmp... yes checking for siglongjmp... yes checking for sigsetjmp... no checking for sigprocmask... yes checking for snprintf... yes checking for srandom... yes checking for strdup... yes checking for symlink... yes checking for system... yes checking for strtoll... yes checking for strtoull... yes checking for tmpfile... yes checking for asprintf... yes checking for vasprintf... yes checking for vsnprintf... yes checking for waitpid... yes checking for roundf... yes checking for lroundf... yes checking for llroundf... yes checking for round... yes checking for lround... yes checking for llround... yes checking for an ANSI C-conforming const... yes checking if the compiler understands __inline__... yes checking if the compiler understands __inline... yes checking if the compiler understands inline... yes checking for __attribute__ extension... yes checking for __func__ extension... yes checking for __FUNCTION__ extension... yes checking for C99 designated initialization support... yes checking how to print long long... %ld and %lu checking enable debugging symbols... no checking enable asserts... no checking enable developer warnings... no checking profiling... no checking optimization level... high checking enable file locking... best-effort checking for internal debug output... none checking whether function stack tracking is enabled... no checking for API tracing... no checking whether a memory checking tool will be used... no checking whether internal memory allocation sanity checking is used... no checking for parallel support files... skipped checking whether O_DIRECT is declared... yes checking for posix_memalign... yes checking if the direct I/O virtual file driver (VFD) is enabled... no checking if the Mirror virtual file driver (VFD) is enabled... no checking for curl/curl.h... yes checking for openssl/evp.h... yes checking for openssl/hmac.h... yes checking for openssl/sha.h... yes checking for curl_global_init in -lcurl... yes checking for EVP_sha256 in -lcrypto... yes checking if the Read-Only S3 virtual file driver (VFD) is enabled... yes checking for libhdfs... suppressed checking for custom examples path definition... ${prefix}/share/hdf5_examples checking for custom plugin default path definition... /usr/local/hdf5/lib/plugin checking whether exception handling functions is checked during data conversions... yes checking whether data accuracy is guaranteed during data conversions... yes checking if the machine has window style path name... no checking if using special algorithm to convert long double to (unsigned) long values... no checking if using special algorithm to convert (unsigned) long to long double values... no checking if correctly converting long double to (unsigned) long long values... yes checking if correctly converting (unsigned) long long to long double values... yes checking if the system is IBM ppc64le and cannot correctly convert some long double values... no checking additional programs should be built... no checking if deprecated public symbols are available... yes checking which version of public symbols to use by default... v110 checking whether to perform strict file format checks... no checking for pread... yes checking for pwrite... yes checking whether to use pread/pwrite instead of read/write in certain VFDs... yes checking whether to have library information embedded in the executables... yes checking if alignment restrictions are strictly enforced... no configure: creating ./config.lt config.lt: creating libtool checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating src/libhdf5.settings config.status: creating Makefile config.status: creating src/Makefile config.status: creating utils/Makefile config.status: creating utils/mirror_vfd/Makefile config.status: creating bin/h5cc config.status: creating bin/Makefile config.status: creating c++/Makefile config.status: creating c++/src/Makefile config.status: creating c++/src/h5c++ config.status: creating hl/Makefile config.status: creating hl/src/Makefile config.status: creating hl/c++/Makefile config.status: creating hl/c++/src/Makefile config.status: creating src/H5config.h config.status: executing pubconf commands creating src/H5pubconf.h Post process src/libhdf5.settings config.status: executing depfiles commands config.status: executing libtool commands config.status: executing .classes commands SUMMARY OF THE HDF5 CONFIGURATION ================================= General Information: ------------------- HDF5 Version: 1.10.7 Configured on: Mon Jan 13 05:12:00 CET 2025 Configured by: hornik@anduin2 Host system: x86_64-pc-linux-gnu Uname information: Linux anduin2 6.11.10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1 (2024-11-23) x86_64 GNU/Linux Byte sex: little-endian Installation point: /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hdf5 Compiling Options: ------------------ Build Mode: production Debugging Symbols: no Asserts: no Profiling: no Optimization Level: high Linking Options: ---------------- Libraries: static Statically Linked Executables: LDFLAGS: -Wl,-O1 H5_LDFLAGS: AM_LDFLAGS: Extra libraries: -lcrypto -lcurl -lsz -laec -lz -ldl -lm Archiver: ar AR_FLAGS: cr Ranlib: ranlib Languages: ---------- C: yes C Compiler: /usr/bin/clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer ( 19.1.6) CPPFLAGS: -I/usr/local/include H5_CPPFLAGS: -D_GNU_SOURCE -D_POSIX_C_SOURCE=200809L -DNDEBUG -UH5_DEBUG_API AM_CPPFLAGS: C Flags: -g -O3 -Wall -pedantic -w -fpic H5 C Flags: -std=c99 -Warray-bounds -Wcast-qual -Wconversion -Wdouble-promotion -Wformat=2 -Wframe-larger-than=16384 -Wimplicit-fallthrough -Wno-c++-compat -Wno-format-nonliteral -Wnull-dereference -Wunused-const-variable -Wwrite-strings -Wvolatile-register-var -Wno-self-assign-overloaded -Wno-unknown-warning-option -Wno-missing-noreturn -O3 -Werror=bad-function-cast -Werror=implicit-function-declaration -Werror=incompatible-pointer-types -Werror=missing-declarations -Werror=packed -Werror=shadow -Werror=switch -Wno-error=incompatible-pointer-types-discards-qualifiers -Wunused-function -Wunused-variable -Wunused-parameter -Wcast-align -Wformat AM C Flags: Shared C Library: no Static C Library: yes Fortran: no C++: yes C++ Compiler: /usr/bin/clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 C++ Flags: -w -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -fpic H5 C++ Flags: -std=c++11 -Warray-bounds -Wcast-qual -Wconversion -Wdouble-promotion -Wformat=2 -Wframe-larger-than=16384 -Wimplicit-fallthrough -Wno-c++-compat -Wno-format-nonliteral -Wnull-dereference -Wunused-const-variable -Wwrite-strings -Wvolatile-register-var -Wno-self-assign-overloaded -Wno-unknown-warning-option -O3 -Werror=bad-function-cast -Werror=implicit-function-declaration -Werror=incompatible-pointer-types -Werror=missing-declarations -Werror=packed -Werror=shadow -Werror=switch -Wno-error=incompatible-pointer-types-discards-qualifiers -Wunused-function -Wunused-variable -Wunused-parameter -Wcast-align -Wformat AM C++ Flags: Shared C++ Library: no Static C++ Library: yes Java: no Features: --------- Parallel HDF5: no Parallel Filtered Dataset Writes: no Large Parallel I/O: no High-level library: yes Build HDF5 Tests: no Build HDF5 Tools: no Threadsafety: no Default API mapping: v110 With deprecated public symbols: yes I/O filters (external): deflate(zlib),szip(no encoder) MPE: no Direct VFD: no Mirror VFD: no (Read-Only) S3 VFD: yes (Read-Only) HDFS VFD: no dmalloc: no Packages w/ extra debug output: none API tracing: no Using memory checker: no Memory allocation sanity checks: no Function stack tracing: no Use file locking: best-effort Strict file format checks: no Optimization instrumentation: no make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5' for d in src . c++ hl; do \ if test $d != .; then \ (cd $d && make lib) || exit 1; \ fi; \ done make[3]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src' make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src' CC H5.lo CC H5checksum.lo CC H5dbg.lo CC H5system.lo CC H5timer.lo CC H5trace.lo CC H5A.lo CC H5Abtree2.lo CC H5Adense.lo CC H5Adeprec.lo CC H5Aint.lo CC H5Atest.lo CC H5AC.lo CC H5ACdbg.lo CC H5ACproxy_entry.lo CC H5B.lo CC H5Bcache.lo CC H5Bdbg.lo CC H5B2.lo CC H5B2cache.lo CC H5B2dbg.lo CC H5B2hdr.lo CC H5B2int.lo CC H5B2internal.lo CC H5B2leaf.lo CC H5B2stat.lo CC H5B2test.lo CC H5C.lo CC H5Cdbg.lo CC H5Cepoch.lo CC H5Cimage.lo CC H5Clog.lo CC H5Clog_json.lo CC H5Clog_trace.lo CC H5Cprefetched.lo CC H5Cquery.lo CC H5Ctag.lo CC H5Ctest.lo CC H5CS.lo CC H5CX.lo CC H5D.lo CC H5Dbtree.lo CC H5Dbtree2.lo CC H5Dchunk.lo CC H5Dcompact.lo CC H5Dcontig.lo CC H5Ddbg.lo CC H5Ddeprec.lo CC H5Dearray.lo CC H5Defl.lo CC H5Dfarray.lo CC H5Dfill.lo CC H5Dint.lo CC H5Dio.lo CC H5Dlayout.lo CC H5Dnone.lo CC H5Doh.lo CC H5Dscatgath.lo CC H5Dselect.lo CC H5Dsingle.lo CC H5Dtest.lo CC H5Dvirtual.lo CC H5E.lo CC H5Edeprec.lo CC H5Eint.lo CC H5EA.lo CC H5EAcache.lo CC H5EAdbg.lo CC H5EAdblkpage.lo CC H5EAdblock.lo CC H5EAhdr.lo CC H5EAiblock.lo CC H5EAint.lo CC H5EAsblock.lo CC H5EAstat.lo CC H5EAtest.lo CC H5F.lo CC H5Faccum.lo CC H5Fcwfs.lo CC H5Fdbg.lo CC H5Fdeprec.lo CC H5Fefc.lo CC H5Ffake.lo CC H5Fint.lo CC H5Fio.lo CC H5Fmount.lo CC H5Fquery.lo CC H5Fsfile.lo CC H5Fspace.lo CC H5Fsuper.lo CC H5Fsuper_cache.lo CC H5Ftest.lo CC H5FA.lo CC H5FAcache.lo CC H5FAdbg.lo CC H5FAdblock.lo CC H5FAdblkpage.lo CC H5FAhdr.lo CC H5FAint.lo CC H5FAstat.lo CC H5FAtest.lo CC H5FD.lo CC H5FDcore.lo CC H5FDfamily.lo CC H5FDhdfs.lo CC H5FDint.lo CC H5FDlog.lo CC H5FDmulti.lo CC H5FDsec2.lo CC H5FDspace.lo CC H5FDsplitter.lo CC H5FDstdio.lo CC H5FDtest.lo CC H5FL.lo CC H5FO.lo CC H5FS.lo CC H5FScache.lo CC H5FSdbg.lo CC H5FSint.lo CC H5FSsection.lo CC H5FSstat.lo CC H5FStest.lo CC H5G.lo CC H5Gbtree2.lo CC H5Gcache.lo CC H5Gcompact.lo CC H5Gdense.lo CC H5Gdeprec.lo CC H5Gent.lo CC H5Gint.lo CC H5Glink.lo CC H5Gloc.lo CC H5Gname.lo CC H5Gnode.lo CC H5Gobj.lo CC H5Goh.lo CC H5Groot.lo CC H5Gstab.lo CC H5Gtest.lo CC H5Gtraverse.lo CC H5HF.lo CC H5HFbtree2.lo CC H5HFcache.lo CC H5HFdbg.lo CC H5HFdblock.lo CC H5HFdtable.lo CC H5HFhdr.lo CC H5HFhuge.lo CC H5HFiblock.lo CC H5HFiter.lo CC H5HFman.lo CC H5HFsection.lo CC H5HFspace.lo CC H5HFstat.lo CC H5HFtest.lo CC H5HFtiny.lo CC H5HG.lo CC H5HGcache.lo CC H5HGdbg.lo CC H5HGquery.lo CC H5HL.lo CC H5HLcache.lo CC H5HLdbg.lo CC H5HLint.lo CC H5HLprfx.lo CC H5HLdblk.lo CC H5HP.lo CC H5I.lo CC H5Itest.lo CC H5L.lo CC H5Lexternal.lo CC H5make_libsettings.o CCLD H5make_libsettings LD_LIBRARY_PATH="$LD_LIBRARY_PATH`echo -Wl,-O1 | \ sed -e 's/-L/:/g' -e 's/ //g'`" \ ./H5make_libsettings > H5lib_settings.c || \ (test $HDF5_Make_Ignore && echo "*** Error ignored") || \ (rm -f H5lib_settings.c ; exit 1) CC H5lib_settings.lo CC H5MF.lo CC H5MFaggr.lo CC H5MFdbg.lo CC H5MFsection.lo CC H5MM.lo CC H5MP.lo CC H5MPtest.lo CC H5O.lo CC H5Odeprec.lo CC H5Oainfo.lo CC H5Oalloc.lo CC H5Oattr.lo CC H5Oattribute.lo CC H5Obogus.lo CC H5Obtreek.lo CC H5Ocache.lo CC H5Ocache_image.lo CC H5Ochunk.lo CC H5Ocont.lo CC H5Ocopy.lo CC H5Odbg.lo CC H5Odrvinfo.lo CC H5Odtype.lo CC H5Oefl.lo CC H5Ofill.lo CC H5Oflush.lo CC H5Ofsinfo.lo CC H5Oginfo.lo CC H5Oint.lo CC H5Olayout.lo CC H5Olinfo.lo CC H5Olink.lo CC H5Omessage.lo CC H5Omtime.lo CC H5Oname.lo CC H5Onull.lo CC H5Opline.lo CC H5Orefcount.lo CC H5Osdspace.lo CC H5Oshared.lo CC H5Oshmesg.lo CC H5Ostab.lo CC H5Otest.lo CC H5Ounknown.lo CC H5P.lo CC H5Pacpl.lo CC H5Pdapl.lo CC H5Pdcpl.lo CC H5Pdeprec.lo CC H5Pdxpl.lo CC H5Pencdec.lo CC H5Pfapl.lo CC H5Pfcpl.lo CC H5Pfmpl.lo CC H5Pgcpl.lo CC H5Pint.lo CC H5Plapl.lo CC H5Plcpl.lo CC H5Pocpl.lo CC H5Pocpypl.lo CC H5Pstrcpl.lo CC H5Ptest.lo CC H5PB.lo CC H5PL.lo CC H5PLint.lo CC H5PLpath.lo CC H5PLplugin_cache.lo CC H5R.lo CC H5Rint.lo CC H5Rdeprec.lo CC H5UC.lo CC H5RS.lo CC H5S.lo CC H5Sall.lo CC H5Sdbg.lo CC H5Shyper.lo CC H5Snone.lo CC H5Spoint.lo CC H5Sselect.lo CC H5Stest.lo CC H5SL.lo CC H5SM.lo CC H5SMbtree2.lo CC H5SMcache.lo CC H5SMmessage.lo CC H5SMtest.lo CC H5ST.lo CC H5T.lo CC H5Tarray.lo CC H5Tbit.lo CC H5Tcommit.lo CC H5Tcompound.lo CC H5Tconv.lo CC H5Tcset.lo CC H5Tdbg.lo CC H5Tdeprec.lo CC H5Tenum.lo CC H5Tfields.lo CC H5Tfixed.lo CC H5Tfloat.lo CC H5detect.o CCLD H5detect LD_LIBRARY_PATH="$LD_LIBRARY_PATH`echo -Wl,-O1 | \ sed -e 's/-L/:/g' -e 's/ //g'`" \ ./H5detect > H5Tinit.c || \ (test $HDF5_Make_Ignore && echo "*** Error ignored") || \ (rm -f H5Tinit.c ; exit 1) CC H5Tinit.lo CC H5Tnative.lo CC H5Toffset.lo CC H5Toh.lo CC H5Topaque.lo CC H5Torder.lo CC H5Tpad.lo CC H5Tprecis.lo CC H5Tstrpad.lo CC H5Tvisit.lo CC H5Tvlen.lo CC H5TS.lo CC H5VM.lo CC H5WB.lo CC H5Z.lo CC H5Zdeflate.lo CC H5Zfletcher32.lo CC H5Znbit.lo CC H5Zshuffle.lo CC H5Zscaleoffset.lo CC H5Zszip.lo CC H5Ztrans.lo CC H5FDros3.lo CC H5FDs3comms.lo CCLD libhdf5.la make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src' make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src' make[3]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++' make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++' make[4]: Nothing to be done for 'build-lib'. make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++' + cd src + make lib make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src' make[5]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src' CXX H5Exception.lo CXX H5IdComponent.lo CXX H5DataSpace.lo CXX H5PropList.lo CXX H5Library.lo CXX H5FaccProp.lo CXX H5FcreatProp.lo CXX H5LcreatProp.lo CXX H5LaccProp.lo CXX H5DaccProp.lo CXX H5DxferProp.lo CXX H5DcreatProp.lo CXX H5Location.lo CXX H5AbstractDs.lo CXX H5Attribute.lo CXX H5Object.lo CXX H5OcreatProp.lo CXX H5DataType.lo CXX H5AtomType.lo CXX H5PredType.lo CXX H5EnumType.lo CXX H5IntType.lo CXX H5FloatType.lo CXX H5StrType.lo CXX H5ArrayType.lo CXX H5VarLenType.lo CXX H5CompType.lo CXX H5DataSet.lo CXX H5CommonFG.lo CXX H5Group.lo CXX H5File.lo CXXLD libhdf5_cpp.la make[5]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src' make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src' make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++' make[3]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl' make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl' make[4]: Nothing to be done for 'build-lib'. make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl' + cd src + make lib make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/src' make[5]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/src' CC H5DO.lo CC H5DS.lo CC H5IM.lo CC H5LT.lo CC H5LTanalyze.lo CC H5LTparse.lo CC H5PT.lo CC H5TB.lo CC H5LD.lo CCLD libhdf5_hl.la make[5]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/src' make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/src' + cd c++ + make lib make[4]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++' make[5]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++' make[5]: Nothing to be done for 'build-lib'. make[5]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++' + cd src + make lib make[5]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++/src' make[6]: Entering directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++/src' CXX H5PacketTable.lo CXXLD libhdf5_hl_cpp.la make[6]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++/src' make[5]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++/src' make[4]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl/c++' make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/hl' make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5' mkdir -p "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "hdf5/src"/*.h "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "hdf5/c++/src"/*.h "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "hdf5/hl/src"/*.h "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "hdf5/hl/c++/src"/*.h "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "hdf5/src"/libhdf5.settings "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" mkdir -p "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/" cp "hdf5/src/.libs/libhdf5.a" "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/" cp "hdf5/c++/src/.libs/libhdf5_cpp.a" "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/" cp "hdf5/hl/src/.libs/libhdf5_hl.a" "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/" cp "hdf5/hl/c++/src/.libs/libhdf5_hl_cpp.a" "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/" clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I"/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rhdf5lib.c -o Rhdf5lib.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Rhdf5lib.so Rhdf5lib.o /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/libhdf5.a -lsz -laec -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rhdf5lib/00new/Rhdf5lib/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rhdf5lib) begin installing package ‘mzR’ * installing *source* package ‘plotly’ ... ** this is package ‘plotly’ version ‘4.10.4’ ** package ‘plotly’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotly) begin installing package ‘mixtools’ * installing *source* package ‘shiny’ ... ** this is package ‘shiny’ version ‘1.10.0’ ** package ‘shiny’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny) * installing *source* package ‘GenomicRanges’ ... ** this is package ‘GenomicRanges’ version ‘1.58.0’ ** package ‘GenomicRanges’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpE2f11Y/R.INSTALL365dac26ac8d1/GenomicRanges/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c transcript_utils.c -o transcript_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o GenomicRanges.so IRanges_stubs.o R_init_GenomicRanges.o S4Vectors_stubs.o transcript_utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpE2f11Y/R.INSTALL365dac26ac8d1/GenomicRanges/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-GenomicRanges/00new/GenomicRanges/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomicRanges) begin installing package ‘AnnotationFilter’ * installing *source* package ‘SparseArray’ ... ** this is package ‘SparseArray’ version ‘1.6.0’ ** package ‘SparseArray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPRAHDY/R.INSTALL365e9e755eb8cb/SparseArray/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c ExtendableJaggedArray.c -o ExtendableJaggedArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c OPBufTree.c -o OPBufTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c R_init_SparseArray.c -o R_init_SparseArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Rvector_summarization.c -o Rvector_summarization.o Rvector_summarization.c:1360:12: warning: unused function 'any_NA_list_elt' [-Wunused-function] 1360 | static int any_NA_list_elt(SEXP x) | ^~~~~~~~~~~~~~~ Rvector_summarization.c:1370:12: warning: unused function 'count_NA_list_elts' [-Wunused-function] 1370 | static int count_NA_list_elts(SEXP x) | ^~~~~~~~~~~~~~~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Rvector_utils.c -o Rvector_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SBT_utils.c -o SBT_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SVT_SparseArray_class.c -o SVT_SparseArray_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Arith_methods.c -o SparseArray_Arith_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Compare_methods.c -o SparseArray_Compare_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Complex_methods.c -o SparseArray_Complex_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Logic_methods.c -o SparseArray_Logic_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Math_methods.c -o SparseArray_Math_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_abind.c -o SparseArray_abind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_aperm.c -o SparseArray_aperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_dim_tuning.c -o SparseArray_dim_tuning.o SparseArray_dim_tuning.c:141:37: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 141 | static SEXP make_scalar_lacunar_leaf() | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_matrixStats.c -o SparseArray_matrixStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_misc_methods.c -o SparseArray_misc_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subassignment.c -o SparseArray_subassignment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subassignment_OLD.c -o SparseArray_subassignment_OLD.o SparseArray_subassignment_OLD.c:245:19: warning: unused function 'descend_to_bottom_by_coords0' [-Wunused-function] 245 | static inline int descend_to_bottom_by_coords0(SEXP SVT, SEXP SVT0, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subsetting.c -o SparseArray_subsetting.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_summarization.c -o SparseArray_summarization.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseMatrix_mult.c -o SparseMatrix_mult.o SparseMatrix_mult.c:306:13: warning: unused function 'crossprod2_doubleSV_doublemat' [-Wunused-function] 306 | static void crossprod2_doubleSV_doublemat( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SparseMatrix_mult.c:346:13: warning: unused function 'crossprod2_doublemat_doubleSV' [-Wunused-function] 346 | static void crossprod2_doublemat_doubleSV( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec.c -o SparseVec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Arith.c -o SparseVec_Arith.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Compare.c -o SparseVec_Compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Logic.c -o SparseVec_Logic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Math.c -o SparseVec_Math.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_dotprod.c -o SparseVec_dotprod.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c XVector_stubs.c -o XVector_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c argcheck_utils.c -o argcheck_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c coerceVector2.c -o coerceVector2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c leaf_utils.c -o leaf_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c randomSparseArray.c -o randomSparseArray.o randomSparseArray.c:42:19: warning: unused function 'binary_find_interval' [-Wunused-function] 42 | static inline int binary_find_interval(double u, | ^~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c readSparseCSV.c -o readSparseCSV.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c rowsum_methods.c -o rowsum_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c sparseMatrix_utils.c -o sparseMatrix_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c test.c -o test.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c thread_control.c -o thread_control.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o SparseArray.so ExtendableJaggedArray.o IRanges_stubs.o OPBufTree.o R_init_SparseArray.o Rvector_summarization.o Rvector_utils.o S4Vectors_stubs.o SBT_utils.o SVT_SparseArray_class.o SparseArray_Arith_methods.o SparseArray_Compare_methods.o SparseArray_Complex_methods.o SparseArray_Logic_methods.o SparseArray_Math_methods.o SparseArray_abind.o SparseArray_aperm.o SparseArray_dim_tuning.o SparseArray_matrixStats.o SparseArray_misc_methods.o SparseArray_subassignment.o SparseArray_subassignment_OLD.o SparseArray_subsetting.o SparseArray_summarization.o SparseMatrix_mult.o SparseVec.o SparseVec_Arith.o SparseVec_Compare.o SparseVec_Logic.o SparseVec_Math.o SparseVec_dotprod.o XVector_stubs.o argcheck_utils.o coerceVector2.o leaf_utils.o randomSparseArray.o readSparseCSV.o rowsum_methods.o sparseMatrix_utils.o test.o thread_control.o -fopenmp -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPRAHDY/R.INSTALL365e9e755eb8cb/SparseArray/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-SparseArray/00new/SparseArray/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SparseArray) begin installing package ‘DelayedArray’ * installing *source* package ‘mixtools’ ... ** this is package ‘mixtools’ version ‘2.0.0’ ** package ‘mixtools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLhYRYO/R.INSTALL366367e3336f5/mixtools/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDEloc2.c -o KDEloc2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDElocscale.c -o KDElocscale.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDErepeated.c -o KDErepeated.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDErepeatedbw.c -o KDErepeatedbw.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDEsymloc.c -o KDEsymloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDEsymloc1comp.c -o KDEsymloc1comp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c KDEsymloc2.c -o KDEsymloc2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c multinompost.c -o multinompost.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mvwkde.c -o mvwkde.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c new_svalues.c -o new_svalues.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c normpost.c -o normpost.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c npMSL.c -o npMSL.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sd.c -o sd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c z.c -o z.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mixtools.so KDEloc2.o KDElocscale.o KDErepeated.o KDErepeatedbw.o KDEsymloc.o KDEsymloc1comp.o KDEsymloc2.o init.o multinompost.o mvwkde.o new_svalues.o normpost.o npMSL.o sd.o z.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLhYRYO/R.INSTALL366367e3336f5/mixtools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mixtools/00new/mixtools/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mixtools) * installing *source* package ‘AnnotationFilter’ ... ** this is package ‘AnnotationFilter’ version ‘1.30.0’ ** package ‘AnnotationFilter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AnnotationFilter) * installing *source* package ‘igraph’ ... ** this is package ‘igraph’ version ‘2.1.3’ ** package ‘igraph’ successfully unpacked and MD5 sums checked ** using staged installation libxml2 include directories: -I/usr/include/libxml2 libxml2 library link flags: -lxml2 Using installed GLPK ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaOYtye/R.INSTALL3628941040410d/igraph/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpprinterface.cpp -o cpprinterface.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rinterface.c -o rinterface.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rinterface_extra.c -o rinterface_extra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rrandom.c -o rrandom.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c simpleraytracer.cpp -o simpleraytracer.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dgetv0.f -o vendor/arpack/dgetv0.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dlaqrb.f -o vendor/arpack/dlaqrb.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dmout.f -o vendor/arpack/dmout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaitr.f -o vendor/arpack/dnaitr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnapps.f -o vendor/arpack/dnapps.o ./vendor/arpack/dnapps.f:342:19: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, h(i+1,i), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ ./vendor/arpack/dnapps.f:593:10: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #10: incompatible dummy data object shapes call dgemv ('N', n, kplusp-i+1, one, v, ldv, ^ ./vendor/arpack/dnapps.f:584:11: previous reference to 'dgemv' & call dgemv ('N', n, kplusp, one, v, ldv, q(1,kev+1), 1, zero, ^ ./vendor/arpack/dnapps.f:624:10: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, q(kplusp,kev), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ ./vendor/arpack/dnapps.f:626:10: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, h(kev+1,kev), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaup2.f -o vendor/arpack/dnaup2.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaupd.f -o vendor/arpack/dnaupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnconv.f -o vendor/arpack/dnconv.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dneigh.f -o vendor/arpack/dneigh.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dneupd.f -o vendor/arpack/dneupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dngets.f -o vendor/arpack/dngets.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaitr.f -o vendor/arpack/dsaitr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsapps.f -o vendor/arpack/dsapps.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaup2.f -o vendor/arpack/dsaup2.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaupd.f -o vendor/arpack/dsaupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsconv.f -o vendor/arpack/dsconv.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dseigt.f -o vendor/arpack/dseigt.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsesrt.f -o vendor/arpack/dsesrt.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dseupd.f -o vendor/arpack/dseupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsgets.f -o vendor/arpack/dsgets.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsortc.f -o vendor/arpack/dsortc.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsortr.f -o vendor/arpack/dsortr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstatn.f -o vendor/arpack/dstatn.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstats.f -o vendor/arpack/dstats.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstqrb.f -o vendor/arpack/dstqrb.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dvout.f -o vendor/arpack/dvout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/ivout.f -o vendor/arpack/ivout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/second.f -o vendor/arpack/second.o flang-new-19 -fpic -g -O2 -c vendor/arpack/wrap.f -o vendor/arpack/wrap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/betweenness.c -o vendor/cigraph/src/centrality/betweenness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/centrality_other.c -o vendor/cigraph/src/centrality/centrality_other.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/centralization.c -o vendor/cigraph/src/centrality/centralization.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/closeness.c -o vendor/cigraph/src/centrality/closeness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/coreness.c -o vendor/cigraph/src/centrality/coreness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/eigenvector.c -o vendor/cigraph/src/centrality/eigenvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/hub_authority.c -o vendor/cigraph/src/centrality/hub_authority.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/pagerank.c -o vendor/cigraph/src/centrality/pagerank.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack.cpp -o vendor/cigraph/src/centrality/prpack.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_base_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_result.cpp -o vendor/cigraph/src/centrality/prpack/prpack_result.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_solver.cpp -o vendor/cigraph/src/centrality/prpack/prpack_solver.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_utils.cpp -o vendor/cigraph/src/centrality/prpack/prpack_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/truss.cpp -o vendor/cigraph/src/centrality/truss.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/cliquer.c -o vendor/cigraph/src/cliques/cliquer/cliquer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/cliquer_graph.c -o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/reorder.c -o vendor/cigraph/src/cliques/cliquer/reorder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer_wrapper.c -o vendor/cigraph/src/cliques/cliquer_wrapper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliques.c -o vendor/cigraph/src/cliques/cliques.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/glet.c -o vendor/cigraph/src/cliques/glet.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/maximal_cliques.c -o vendor/cigraph/src/cliques/maximal_cliques.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/community_misc.c -o vendor/cigraph/src/community/community_misc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/edge_betweenness.c -o vendor/cigraph/src/community/edge_betweenness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/fast_modularity.c -o vendor/cigraph/src/community/fast_modularity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/fluid.c -o vendor/cigraph/src/community/fluid.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap.cc -o vendor/cigraph/src/community/infomap/infomap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap_FlowGraph.cc -o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap_Greedy.cc -o vendor/cigraph/src/community/infomap/infomap_Greedy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/label_propagation.c -o vendor/cigraph/src/community/label_propagation.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/leading_eigenvector.c -o vendor/cigraph/src/community/leading_eigenvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/leiden.c -o vendor/cigraph/src/community/leiden.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/louvain.c -o vendor/cigraph/src/community/louvain.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/modularity.c -o vendor/cigraph/src/community/modularity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/optimal_modularity.c -o vendor/cigraph/src/community/optimal_modularity.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/NetDataTypes.cpp -o vendor/cigraph/src/community/spinglass/NetDataTypes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/NetRoutines.cpp -o vendor/cigraph/src/community/spinglass/NetRoutines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/clustertool.cpp -o vendor/cigraph/src/community/spinglass/clustertool.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/pottsmodel_2.cpp -o vendor/cigraph/src/community/spinglass/pottsmodel_2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/voronoi.c -o vendor/cigraph/src/community/voronoi.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap.cpp -o vendor/cigraph/src/community/walktrap/walktrap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_communities.cpp -o vendor/cigraph/src/community/walktrap/walktrap_communities.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_graph.cpp -o vendor/cigraph/src/community/walktrap/walktrap_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_heap.cpp -o vendor/cigraph/src/community/walktrap/walktrap_heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/cohesive_blocks.c -o vendor/cigraph/src/connectivity/cohesive_blocks.o vendor/cigraph/src/connectivity/cohesive_blocks.c:300:30: warning: variable 'kept' set but not used [-Wunused-but-set-variable] 300 | igraph_integer_t no, kept = 0; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/components.c -o vendor/cigraph/src/connectivity/components.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/reachability.c -o vendor/cigraph/src/connectivity/reachability.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/separators.c -o vendor/cigraph/src/connectivity/separators.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/adjacency.c -o vendor/cigraph/src/constructors/adjacency.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/atlas.c -o vendor/cigraph/src/constructors/atlas.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/basic_constructors.c -o vendor/cigraph/src/constructors/basic_constructors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/circulant.c -o vendor/cigraph/src/constructors/circulant.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/de_bruijn.c -o vendor/cigraph/src/constructors/de_bruijn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/famous.c -o vendor/cigraph/src/constructors/famous.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/full.c -o vendor/cigraph/src/constructors/full.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/generalized_petersen.c -o vendor/cigraph/src/constructors/generalized_petersen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/kautz.c -o vendor/cigraph/src/constructors/kautz.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/lattices.c -o vendor/cigraph/src/constructors/lattices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/lcf.c -o vendor/cigraph/src/constructors/lcf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/linegraph.c -o vendor/cigraph/src/constructors/linegraph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/prufer.c -o vendor/cigraph/src/constructors/prufer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/regular.c -o vendor/cigraph/src/constructors/regular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/trees.c -o vendor/cigraph/src/constructors/trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/array.c -o vendor/cigraph/src/core/array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/bitset.c -o vendor/cigraph/src/core/bitset.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/bitset_list.c -o vendor/cigraph/src/core/bitset_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/buckets.c -o vendor/cigraph/src/core/buckets.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/cutheap.c -o vendor/cigraph/src/core/cutheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/dqueue.c -o vendor/cigraph/src/core/dqueue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/error.c -o vendor/cigraph/src/core/error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/estack.c -o vendor/cigraph/src/core/estack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/fixed_vectorlist.c -o vendor/cigraph/src/core/fixed_vectorlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/genheap.c -o vendor/cigraph/src/core/genheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/grid.c -o vendor/cigraph/src/core/grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/heap.c -o vendor/cigraph/src/core/heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/indheap.c -o vendor/cigraph/src/core/indheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/interruption.c -o vendor/cigraph/src/core/interruption.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/marked_queue.c -o vendor/cigraph/src/core/marked_queue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/matrix.c -o vendor/cigraph/src/core/matrix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/matrix_list.c -o vendor/cigraph/src/core/matrix_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/memory.c -o vendor/cigraph/src/core/memory.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/printing.c -o vendor/cigraph/src/core/printing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/progress.c -o vendor/cigraph/src/core/progress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/psumtree.c -o vendor/cigraph/src/core/psumtree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/set.c -o vendor/cigraph/src/core/set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/sparsemat.c -o vendor/cigraph/src/core/sparsemat.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/stack.c -o vendor/cigraph/src/core/stack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/statusbar.c -o vendor/cigraph/src/core/statusbar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/strvector.c -o vendor/cigraph/src/core/strvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/trie.c -o vendor/cigraph/src/core/trie.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector.c -o vendor/cigraph/src/core/vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector_list.c -o vendor/cigraph/src/core/vector_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector_ptr.c -o vendor/cigraph/src/core/vector_ptr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/flow.c -o vendor/cigraph/src/flow/flow.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/flow_conversion.c -o vendor/cigraph/src/flow/flow_conversion.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/st-cuts.c -o vendor/cigraph/src/flow/st-cuts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/barabasi.c -o vendor/cigraph/src/games/barabasi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/callaway_traits.c -o vendor/cigraph/src/games/callaway_traits.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/chung_lu.c -o vendor/cigraph/src/games/chung_lu.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/citations.c -o vendor/cigraph/src/games/citations.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/correlated.c -o vendor/cigraph/src/games/correlated.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/degree_sequence.c -o vendor/cigraph/src/games/degree_sequence.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:271:19: warning: variable 'cost' set but not used [-Wunused-but-set-variable] 271 | unsigned long cost = 0; | ^ vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:290:12: warning: variable 'avg_K' set but not used [-Wunused-but-set-variable] 290 | double avg_K = 0; | ^ vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:291:12: warning: variable 'avg_T' set but not used [-Wunused-but-set-variable] 291 | double avg_T = 0; | ^ 3 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/dotproduct.c -o vendor/cigraph/src/games/dotproduct.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/erdos_renyi.c -o vendor/cigraph/src/games/erdos_renyi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/establishment.c -o vendor/cigraph/src/games/establishment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/forestfire.c -o vendor/cigraph/src/games/forestfire.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/grg.c -o vendor/cigraph/src/games/grg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/growing_random.c -o vendor/cigraph/src/games/growing_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/islands.c -o vendor/cigraph/src/games/islands.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/k_regular.c -o vendor/cigraph/src/games/k_regular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/preference.c -o vendor/cigraph/src/games/preference.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/recent_degree.c -o vendor/cigraph/src/games/recent_degree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/sbm.c -o vendor/cigraph/src/games/sbm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/static_fitness.c -o vendor/cigraph/src/games/static_fitness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/tree.c -o vendor/cigraph/src/games/tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/watts_strogatz.c -o vendor/cigraph/src/games/watts_strogatz.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/adjlist.c -o vendor/cigraph/src/graph/adjlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/attributes.c -o vendor/cigraph/src/graph/attributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/basic_query.c -o vendor/cigraph/src/graph/basic_query.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/caching.c -o vendor/cigraph/src/graph/caching.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/cattributes.c -o vendor/cigraph/src/graph/cattributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/graph_list.c -o vendor/cigraph/src/graph/graph_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/iterators.c -o vendor/cigraph/src/graph/iterators.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/type_common.c -o vendor/cigraph/src/graph/type_common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/type_indexededgelist.c -o vendor/cigraph/src/graph/type_indexededgelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/visitors.c -o vendor/cigraph/src/graph/visitors.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/hrg/hrg.cc -o vendor/cigraph/src/hrg/hrg.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/hrg/hrg_types.cc -o vendor/cigraph/src/hrg/hrg_types.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/glpk_support.c -o vendor/cigraph/src/internal/glpk_support.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/hacks.c -o vendor/cigraph/src/internal/hacks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/lsap.c -o vendor/cigraph/src/internal/lsap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/qsort.c -o vendor/cigraph/src/internal/qsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/qsort_r.c -o vendor/cigraph/src/internal/qsort_r.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/utils.c -o vendor/cigraph/src/internal/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/zeroin.c -o vendor/cigraph/src/internal/zeroin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dimacs.c -o vendor/cigraph/src/io/dimacs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dl.c -o vendor/cigraph/src/io/dl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dot.c -o vendor/cigraph/src/io/dot.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/edgelist.c -o vendor/cigraph/src/io/edgelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/gml-tree.c -o vendor/cigraph/src/io/gml-tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/gml.c -o vendor/cigraph/src/io/gml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/graphdb.c -o vendor/cigraph/src/io/graphdb.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/graphml.c -o vendor/cigraph/src/io/graphml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/leda.c -o vendor/cigraph/src/io/leda.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/lgl.c -o vendor/cigraph/src/io/lgl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/ncol.c -o vendor/cigraph/src/io/ncol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/pajek.c -o vendor/cigraph/src/io/pajek.o vendor/cigraph/src/io/pajek.c:524:22: warning: variable 'notop' set but not used [-Wunused-but-set-variable] 524 | igraph_integer_t notop = 0, nobottom = 0; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/parse_utils.c -o vendor/cigraph/src/io/parse_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss.cc -o vendor/cigraph/src/isomorphism/bliss.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/defs.cc -o vendor/cigraph/src/isomorphism/bliss/defs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/graph.cc -o vendor/cigraph/src/isomorphism/bliss/graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/heap.cc -o vendor/cigraph/src/isomorphism/bliss/heap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/orbit.cc -o vendor/cigraph/src/isomorphism/bliss/orbit.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/partition.cc -o vendor/cigraph/src/isomorphism/bliss/partition.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/uintseqhash.cc -o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/utils.cc -o vendor/cigraph/src/isomorphism/bliss/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/isoclasses.c -o vendor/cigraph/src/isomorphism/isoclasses.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/isomorphism_misc.c -o vendor/cigraph/src/isomorphism/isomorphism_misc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/lad.c -o vendor/cigraph/src/isomorphism/lad.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/queries.c -o vendor/cigraph/src/isomorphism/queries.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/vf2.c -o vendor/cigraph/src/isomorphism/vf2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/circular.c -o vendor/cigraph/src/layout/circular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/davidson_harel.c -o vendor/cigraph/src/layout/davidson_harel.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/DensityGrid.cpp -o vendor/cigraph/src/layout/drl/DensityGrid.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/DensityGrid_3d.cpp -o vendor/cigraph/src/layout/drl/DensityGrid_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_graph.cpp -o vendor/cigraph/src/layout/drl/drl_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_graph_3d.cpp -o vendor/cigraph/src/layout/drl/drl_graph_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_layout.cpp -o vendor/cigraph/src/layout/drl/drl_layout.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_layout_3d.cpp -o vendor/cigraph/src/layout/drl/drl_layout_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_parse.cpp -o vendor/cigraph/src/layout/drl/drl_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/fruchterman_reingold.c -o vendor/cigraph/src/layout/fruchterman_reingold.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/gem.c -o vendor/cigraph/src/layout/gem.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/graphopt.c -o vendor/cigraph/src/layout/graphopt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/kamada_kawai.c -o vendor/cigraph/src/layout/kamada_kawai.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/large_graph.c -o vendor/cigraph/src/layout/large_graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_bipartite.c -o vendor/cigraph/src/layout/layout_bipartite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_grid.c -o vendor/cigraph/src/layout/layout_grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_random.c -o vendor/cigraph/src/layout/layout_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/mds.c -o vendor/cigraph/src/layout/mds.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/merge_dla.c -o vendor/cigraph/src/layout/merge_dla.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/merge_grid.c -o vendor/cigraph/src/layout/merge_grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/reingold_tilford.c -o vendor/cigraph/src/layout/reingold_tilford.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/sugiyama.c -o vendor/cigraph/src/layout/sugiyama.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/umap.c -o vendor/cigraph/src/layout/umap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/arpack.c -o vendor/cigraph/src/linalg/arpack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/blas.c -o vendor/cigraph/src/linalg/blas.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/eigen.c -o vendor/cigraph/src/linalg/eigen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/lapack.c -o vendor/cigraph/src/linalg/lapack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/complex.c -o vendor/cigraph/src/math/complex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/safe_intop.c -o vendor/cigraph/src/math/safe_intop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/utils.c -o vendor/cigraph/src/math/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/bipartite.c -o vendor/cigraph/src/misc/bipartite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/chordality.c -o vendor/cigraph/src/misc/chordality.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/cocitation.c -o vendor/cigraph/src/misc/cocitation.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/coloring.c -o vendor/cigraph/src/misc/coloring.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/conversion.c -o vendor/cigraph/src/misc/conversion.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/cycle_bases.c -o vendor/cigraph/src/misc/cycle_bases.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/misc/degree_sequence.cpp -o vendor/cigraph/src/misc/degree_sequence.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/embedding.c -o vendor/cigraph/src/misc/embedding.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/feedback_arc_set.c -o vendor/cigraph/src/misc/feedback_arc_set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/graphicality.c -o vendor/cigraph/src/misc/graphicality.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/matching.c -o vendor/cigraph/src/misc/matching.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/microscopic_update.c -o vendor/cigraph/src/misc/microscopic_update.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/mixing.c -o vendor/cigraph/src/misc/mixing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/motifs.c -o vendor/cigraph/src/misc/motifs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/misc/order_cycle.cpp -o vendor/cigraph/src/misc/order_cycle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/other.c -o vendor/cigraph/src/misc/other.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/power_law_fit.c -o vendor/cigraph/src/misc/power_law_fit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/scan.c -o vendor/cigraph/src/misc/scan.o vendor/cigraph/src/misc/scan.c:76:23: warning: unused function 'igraph_i_trans4_il_simplify' [-Wunused-function] 76 | static igraph_error_t igraph_i_trans4_il_simplify(const igraph_t *graph, igraph_inclist_t *il, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/sir.c -o vendor/cigraph/src/misc/sir.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/spanning_trees.c -o vendor/cigraph/src/misc/spanning_trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/add_edge.c -o vendor/cigraph/src/operators/add_edge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/complementer.c -o vendor/cigraph/src/operators/complementer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/compose.c -o vendor/cigraph/src/operators/compose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/connect_neighborhood.c -o vendor/cigraph/src/operators/connect_neighborhood.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/contract.c -o vendor/cigraph/src/operators/contract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/difference.c -o vendor/cigraph/src/operators/difference.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/disjoint_union.c -o vendor/cigraph/src/operators/disjoint_union.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/intersection.c -o vendor/cigraph/src/operators/intersection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/join.c -o vendor/cigraph/src/operators/join.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/misc_internal.c -o vendor/cigraph/src/operators/misc_internal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/permute.c -o vendor/cigraph/src/operators/permute.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/reverse.c -o vendor/cigraph/src/operators/reverse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/rewire.c -o vendor/cigraph/src/operators/rewire.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/rewire_edges.c -o vendor/cigraph/src/operators/rewire_edges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/simplify.c -o vendor/cigraph/src/operators/simplify.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/subgraph.c -o vendor/cigraph/src/operators/subgraph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/union.c -o vendor/cigraph/src/operators/union.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/all_shortest_paths.c -o vendor/cigraph/src/paths/all_shortest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/astar.c -o vendor/cigraph/src/paths/astar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/bellman_ford.c -o vendor/cigraph/src/paths/bellman_ford.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/dijkstra.c -o vendor/cigraph/src/paths/dijkstra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/distances.c -o vendor/cigraph/src/paths/distances.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/eulerian.c -o vendor/cigraph/src/paths/eulerian.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/floyd_warshall.c -o vendor/cigraph/src/paths/floyd_warshall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/histogram.c -o vendor/cigraph/src/paths/histogram.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/johnson.c -o vendor/cigraph/src/paths/johnson.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/random_walk.c -o vendor/cigraph/src/paths/random_walk.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/shortest_paths.c -o vendor/cigraph/src/paths/shortest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/simple_paths.c -o vendor/cigraph/src/paths/simple_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/sparsifier.c -o vendor/cigraph/src/paths/sparsifier.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/unweighted.c -o vendor/cigraph/src/paths/unweighted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/voronoi.c -o vendor/cigraph/src/paths/voronoi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/widest_paths.c -o vendor/cigraph/src/paths/widest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/basic_properties.c -o vendor/cigraph/src/properties/basic_properties.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/complete.c -o vendor/cigraph/src/properties/complete.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/constraint.c -o vendor/cigraph/src/properties/constraint.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/convergence_degree.c -o vendor/cigraph/src/properties/convergence_degree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/dag.c -o vendor/cigraph/src/properties/dag.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/degrees.c -o vendor/cigraph/src/properties/degrees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/ecc.c -o vendor/cigraph/src/properties/ecc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/girth.c -o vendor/cigraph/src/properties/girth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/loops.c -o vendor/cigraph/src/properties/loops.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/multiplicity.c -o vendor/cigraph/src/properties/multiplicity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/neighborhood.c -o vendor/cigraph/src/properties/neighborhood.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/perfect.c -o vendor/cigraph/src/properties/perfect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/spectral.c -o vendor/cigraph/src/properties/spectral.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/trees.c -o vendor/cigraph/src/properties/trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/triangles.c -o vendor/cigraph/src/properties/triangles.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/random.c -o vendor/cigraph/src/random/random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_glibc2.c -o vendor/cigraph/src/random/rng_glibc2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_mt19937.c -o vendor/cigraph/src/random/rng_mt19937.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_pcg32.c -o vendor/cigraph/src/random/rng_pcg32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_pcg64.c -o vendor/cigraph/src/random/rng_pcg64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/version.c -o vendor/cigraph/src/version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_add.c -o vendor/cigraph/vendor/cs/cs_add.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_amd.c -o vendor/cigraph/vendor/cs/cs_amd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_chol.c -o vendor/cigraph/vendor/cs/cs_chol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_cholsol.c -o vendor/cigraph/vendor/cs/cs_cholsol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_compress.c -o vendor/cigraph/vendor/cs/cs_compress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_counts.c -o vendor/cigraph/vendor/cs/cs_counts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_cumsum.c -o vendor/cigraph/vendor/cs/cs_cumsum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dfs.c -o vendor/cigraph/vendor/cs/cs_dfs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dmperm.c -o vendor/cigraph/vendor/cs/cs_dmperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_droptol.c -o vendor/cigraph/vendor/cs/cs_droptol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dropzeros.c -o vendor/cigraph/vendor/cs/cs_dropzeros.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dupl.c -o vendor/cigraph/vendor/cs/cs_dupl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_entry.c -o vendor/cigraph/vendor/cs/cs_entry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ereach.c -o vendor/cigraph/vendor/cs/cs_ereach.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_etree.c -o vendor/cigraph/vendor/cs/cs_etree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_fkeep.c -o vendor/cigraph/vendor/cs/cs_fkeep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_gaxpy.c -o vendor/cigraph/vendor/cs/cs_gaxpy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_happly.c -o vendor/cigraph/vendor/cs/cs_happly.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_house.c -o vendor/cigraph/vendor/cs/cs_house.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ipvec.c -o vendor/cigraph/vendor/cs/cs_ipvec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_leaf.c -o vendor/cigraph/vendor/cs/cs_leaf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_load.c -o vendor/cigraph/vendor/cs/cs_load.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lsolve.c -o vendor/cigraph/vendor/cs/cs_lsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ltsolve.c -o vendor/cigraph/vendor/cs/cs_ltsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lu.c -o vendor/cigraph/vendor/cs/cs_lu.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lusol.c -o vendor/cigraph/vendor/cs/cs_lusol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_malloc.c -o vendor/cigraph/vendor/cs/cs_malloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_maxtrans.c -o vendor/cigraph/vendor/cs/cs_maxtrans.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_multiply.c -o vendor/cigraph/vendor/cs/cs_multiply.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_norm.c -o vendor/cigraph/vendor/cs/cs_norm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_permute.c -o vendor/cigraph/vendor/cs/cs_permute.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_pinv.c -o vendor/cigraph/vendor/cs/cs_pinv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_post.c -o vendor/cigraph/vendor/cs/cs_post.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_print.c -o vendor/cigraph/vendor/cs/cs_print.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_pvec.c -o vendor/cigraph/vendor/cs/cs_pvec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_qr.c -o vendor/cigraph/vendor/cs/cs_qr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_qrsol.c -o vendor/cigraph/vendor/cs/cs_qrsol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_randperm.c -o vendor/cigraph/vendor/cs/cs_randperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_reach.c -o vendor/cigraph/vendor/cs/cs_reach.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_scatter.c -o vendor/cigraph/vendor/cs/cs_scatter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_scc.c -o vendor/cigraph/vendor/cs/cs_scc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_schol.c -o vendor/cigraph/vendor/cs/cs_schol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_spsolve.c -o vendor/cigraph/vendor/cs/cs_spsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_sqr.c -o vendor/cigraph/vendor/cs/cs_sqr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_symperm.c -o vendor/cigraph/vendor/cs/cs_symperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_tdfs.c -o vendor/cigraph/vendor/cs/cs_tdfs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_transpose.c -o vendor/cigraph/vendor/cs/cs_transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_updown.c -o vendor/cigraph/vendor/cs/cs_updown.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_usolve.c -o vendor/cigraph/vendor/cs/cs_usolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_util.c -o vendor/cigraph/vendor/cs/cs_util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_utsolve.c -o vendor/cigraph/vendor/cs/cs_utsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-advance-128.c -o vendor/cigraph/vendor/pcg/pcg-advance-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-advance-64.c -o vendor/cigraph/vendor/pcg/pcg-advance-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-128.c -o vendor/cigraph/vendor/pcg/pcg-output-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-32.c -o vendor/cigraph/vendor/pcg/pcg-output-32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-64.c -o vendor/cigraph/vendor/pcg/pcg-output-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-rngs-128.c -o vendor/cigraph/vendor/pcg/pcg-rngs-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-rngs-64.c -o vendor/cigraph/vendor/pcg/pcg-rngs-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/gss.c -o vendor/cigraph/vendor/plfit/gss.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/hzeta.c -o vendor/cigraph/vendor/plfit/hzeta.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/kolmogorov.c -o vendor/cigraph/vendor/plfit/kolmogorov.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/lbfgs.c -o vendor/cigraph/vendor/plfit/lbfgs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/mt.c -o vendor/cigraph/vendor/plfit/mt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/options.c -o vendor/cigraph/vendor/plfit/options.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/platform.c -o vendor/cigraph/vendor/plfit/platform.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/plfit.c -o vendor/cigraph/vendor/plfit/plfit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/plfit_error.c -o vendor/cigraph/vendor/plfit/plfit_error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/rbinom.c -o vendor/cigraph/vendor/plfit/rbinom.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/sampling.c -o vendor/cigraph/vendor/plfit/sampling.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/dl-lexer.c -o vendor/io/dl-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/dl-parser.c -o vendor/io/dl-parser.o src/vendor/io/dl-parser.c:1376:9: warning: variable 'igraph_dl_yynerrs' set but not used [-Wunused-but-set-variable] 1376 | int yynerrs = 0; | ^ vendor/io/dl-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_dl_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/gml-lexer.c -o vendor/io/gml-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/gml-parser.c -o vendor/io/gml-parser.o src/vendor/io/gml-parser.c:1294:9: warning: variable 'igraph_gml_yynerrs' set but not used [-Wunused-but-set-variable] 1294 | int yynerrs = 0; | ^ vendor/io/gml-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_gml_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/lgl-lexer.c -o vendor/io/lgl-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/lgl-parser.c -o vendor/io/lgl-parser.o src/vendor/io/lgl-parser.c:1246:9: warning: variable 'igraph_lgl_yynerrs' set but not used [-Wunused-but-set-variable] 1246 | int yynerrs = 0; | ^ vendor/io/lgl-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_lgl_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/ncol-lexer.c -o vendor/io/ncol-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/ncol-parser.c -o vendor/io/ncol-parser.o src/vendor/io/ncol-parser.c:1239:9: warning: variable 'igraph_ncol_yynerrs' set but not used [-Wunused-but-set-variable] 1239 | int yynerrs = 0; | ^ vendor/io/ncol-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_ncol_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/pajek-lexer.c -o vendor/io/pajek-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/pajek-parser.c -o vendor/io/pajek-parser.o src/vendor/io/pajek-parser.c:1531:9: warning: variable 'igraph_pajek_yynerrs' set but not used [-Wunused-but-set-variable] 1531 | int yynerrs = 0; | ^ vendor/io/pajek-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_pajek_yynerrs | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Color.cpp -o vendor/simpleraytracer/Color.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Light.cpp -o vendor/simpleraytracer/Light.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Point.cpp -o vendor/simpleraytracer/Point.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Ray.cpp -o vendor/simpleraytracer/Ray.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/RayTracer.cpp -o vendor/simpleraytracer/RayTracer.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/RayVector.cpp -o vendor/simpleraytracer/RayVector.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Shape.cpp -o vendor/simpleraytracer/Shape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Sphere.cpp -o vendor/simpleraytracer/Sphere.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Triangle.cpp -o vendor/simpleraytracer/Triangle.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/unit_limiter.cpp -o vendor/simpleraytracer/unit_limiter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/R.c -o vendor/uuid/R.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/clear.c -o vendor/uuid/clear.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/compare.c -o vendor/uuid/compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/copy.c -o vendor/uuid/copy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/gen_uuid.c -o vendor/uuid/gen_uuid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/isnull.c -o vendor/uuid/isnull.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/pack.c -o vendor/uuid/pack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/parse.c -o vendor/uuid/parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/unpack.c -o vendor/uuid/unpack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/unparse.c -o vendor/uuid/unparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/mini-gmp/mini-gmp.c -o vendor/cigraph/vendor/mini-gmp/mini-gmp.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o igraph.so cpp11.o cpprinterface.o init.o rinterface.o rinterface_extra.o rrandom.o simpleraytracer.o vendor/arpack/dgetv0.o vendor/arpack/dlaqrb.o vendor/arpack/dmout.o vendor/arpack/dnaitr.o vendor/arpack/dnapps.o vendor/arpack/dnaup2.o vendor/arpack/dnaupd.o vendor/arpack/dnconv.o vendor/arpack/dneigh.o vendor/arpack/dneupd.o vendor/arpack/dngets.o vendor/arpack/dsaitr.o vendor/arpack/dsapps.o vendor/arpack/dsaup2.o vendor/arpack/dsaupd.o vendor/arpack/dsconv.o vendor/arpack/dseigt.o vendor/arpack/dsesrt.o vendor/arpack/dseupd.o vendor/arpack/dsgets.o vendor/arpack/dsortc.o vendor/arpack/dsortr.o vendor/arpack/dstatn.o vendor/arpack/dstats.o vendor/arpack/dstqrb.o vendor/arpack/dvout.o vendor/arpack/ivout.o vendor/arpack/second.o vendor/arpack/wrap.o vendor/cigraph/src/centrality/betweenness.o vendor/cigraph/src/centrality/centrality_other.o vendor/cigraph/src/centrality/centralization.o vendor/cigraph/src/centrality/closeness.o vendor/cigraph/src/centrality/coreness.o vendor/cigraph/src/centrality/eigenvector.o vendor/cigraph/src/centrality/hub_authority.o vendor/cigraph/src/centrality/pagerank.o vendor/cigraph/src/centrality/prpack.o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o vendor/cigraph/src/centrality/prpack/prpack_result.o vendor/cigraph/src/centrality/prpack/prpack_solver.o vendor/cigraph/src/centrality/prpack/prpack_utils.o vendor/cigraph/src/centrality/truss.o vendor/cigraph/src/cliques/cliquer/cliquer.o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o vendor/cigraph/src/cliques/cliquer/reorder.o vendor/cigraph/src/cliques/cliquer_wrapper.o vendor/cigraph/src/cliques/cliques.o vendor/cigraph/src/cliques/glet.o vendor/cigraph/src/cliques/maximal_cliques.o vendor/cigraph/src/community/community_misc.o vendor/cigraph/src/community/edge_betweenness.o vendor/cigraph/src/community/fast_modularity.o vendor/cigraph/src/community/fluid.o vendor/cigraph/src/community/infomap/infomap.o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o vendor/cigraph/src/community/infomap/infomap_Greedy.o vendor/cigraph/src/community/label_propagation.o vendor/cigraph/src/community/leading_eigenvector.o vendor/cigraph/src/community/leiden.o vendor/cigraph/src/community/louvain.o vendor/cigraph/src/community/modularity.o vendor/cigraph/src/community/optimal_modularity.o vendor/cigraph/src/community/spinglass/NetDataTypes.o vendor/cigraph/src/community/spinglass/NetRoutines.o vendor/cigraph/src/community/spinglass/clustertool.o vendor/cigraph/src/community/spinglass/pottsmodel_2.o vendor/cigraph/src/community/voronoi.o vendor/cigraph/src/community/walktrap/walktrap.o vendor/cigraph/src/community/walktrap/walktrap_communities.o vendor/cigraph/src/community/walktrap/walktrap_graph.o vendor/cigraph/src/community/walktrap/walktrap_heap.o vendor/cigraph/src/connectivity/cohesive_blocks.o vendor/cigraph/src/connectivity/components.o vendor/cigraph/src/connectivity/reachability.o vendor/cigraph/src/connectivity/separators.o vendor/cigraph/src/constructors/adjacency.o vendor/cigraph/src/constructors/atlas.o vendor/cigraph/src/constructors/basic_constructors.o vendor/cigraph/src/constructors/circulant.o vendor/cigraph/src/constructors/de_bruijn.o vendor/cigraph/src/constructors/famous.o vendor/cigraph/src/constructors/full.o vendor/cigraph/src/constructors/generalized_petersen.o vendor/cigraph/src/constructors/kautz.o vendor/cigraph/src/constructors/lattices.o vendor/cigraph/src/constructors/lcf.o vendor/cigraph/src/constructors/linegraph.o vendor/cigraph/src/constructors/prufer.o vendor/cigraph/src/constructors/regular.o vendor/cigraph/src/constructors/trees.o vendor/cigraph/src/core/array.o vendor/cigraph/src/core/bitset.o vendor/cigraph/src/core/bitset_list.o vendor/cigraph/src/core/buckets.o vendor/cigraph/src/core/cutheap.o vendor/cigraph/src/core/dqueue.o vendor/cigraph/src/core/error.o vendor/cigraph/src/core/estack.o vendor/cigraph/src/core/fixed_vectorlist.o vendor/cigraph/src/core/genheap.o vendor/cigraph/src/core/grid.o vendor/cigraph/src/core/heap.o vendor/cigraph/src/core/indheap.o vendor/cigraph/src/core/interruption.o vendor/cigraph/src/core/marked_queue.o vendor/cigraph/src/core/matrix.o vendor/cigraph/src/core/matrix_list.o vendor/cigraph/src/core/memory.o vendor/cigraph/src/core/printing.o vendor/cigraph/src/core/progress.o vendor/cigraph/src/core/psumtree.o vendor/cigraph/src/core/set.o vendor/cigraph/src/core/sparsemat.o vendor/cigraph/src/core/stack.o vendor/cigraph/src/core/statusbar.o vendor/cigraph/src/core/strvector.o vendor/cigraph/src/core/trie.o vendor/cigraph/src/core/vector.o vendor/cigraph/src/core/vector_list.o vendor/cigraph/src/core/vector_ptr.o vendor/cigraph/src/flow/flow.o vendor/cigraph/src/flow/flow_conversion.o vendor/cigraph/src/flow/st-cuts.o vendor/cigraph/src/games/barabasi.o vendor/cigraph/src/games/callaway_traits.o vendor/cigraph/src/games/chung_lu.o vendor/cigraph/src/games/citations.o vendor/cigraph/src/games/correlated.o vendor/cigraph/src/games/degree_sequence.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o vendor/cigraph/src/games/dotproduct.o vendor/cigraph/src/games/erdos_renyi.o vendor/cigraph/src/games/establishment.o vendor/cigraph/src/games/forestfire.o vendor/cigraph/src/games/grg.o vendor/cigraph/src/games/growing_random.o vendor/cigraph/src/games/islands.o 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vendor/cigraph/vendor/cs/cs_util.o vendor/cigraph/vendor/cs/cs_utsolve.o vendor/cigraph/vendor/pcg/pcg-advance-128.o vendor/cigraph/vendor/pcg/pcg-advance-64.o vendor/cigraph/vendor/pcg/pcg-output-128.o vendor/cigraph/vendor/pcg/pcg-output-32.o vendor/cigraph/vendor/pcg/pcg-output-64.o vendor/cigraph/vendor/pcg/pcg-rngs-128.o vendor/cigraph/vendor/pcg/pcg-rngs-64.o vendor/cigraph/vendor/plfit/gss.o vendor/cigraph/vendor/plfit/hzeta.o vendor/cigraph/vendor/plfit/kolmogorov.o vendor/cigraph/vendor/plfit/lbfgs.o vendor/cigraph/vendor/plfit/mt.o vendor/cigraph/vendor/plfit/options.o vendor/cigraph/vendor/plfit/platform.o vendor/cigraph/vendor/plfit/plfit.o vendor/cigraph/vendor/plfit/plfit_error.o vendor/cigraph/vendor/plfit/rbinom.o vendor/cigraph/vendor/plfit/sampling.o vendor/io/dl-lexer.o vendor/io/dl-parser.o vendor/io/gml-lexer.o vendor/io/gml-parser.o vendor/io/lgl-lexer.o vendor/io/lgl-parser.o vendor/io/ncol-lexer.o vendor/io/ncol-parser.o vendor/io/pajek-lexer.o vendor/io/pajek-parser.o vendor/simpleraytracer/Color.o vendor/simpleraytracer/Light.o vendor/simpleraytracer/Point.o vendor/simpleraytracer/Ray.o vendor/simpleraytracer/RayTracer.o vendor/simpleraytracer/RayVector.o vendor/simpleraytracer/Shape.o vendor/simpleraytracer/Sphere.o vendor/simpleraytracer/Triangle.o vendor/simpleraytracer/unit_limiter.o vendor/uuid/R.o vendor/uuid/clear.o vendor/uuid/compare.o vendor/uuid/copy.o vendor/uuid/gen_uuid.o vendor/uuid/isnull.o vendor/uuid/pack.o vendor/uuid/parse.o vendor/uuid/unpack.o vendor/uuid/unparse.o vendor/cigraph/vendor/mini-gmp/mini-gmp.o -lxml2 -lglpk -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaOYtye/R.INSTALL3628941040410d/igraph/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-igraph/00new/igraph/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (igraph) * installing *source* package ‘DelayedArray’ ... ** this is package ‘DelayedArray’ version ‘0.32.0’ ** package ‘DelayedArray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPZ4l7V/R.INSTALL36662a22a0cb5/DelayedArray/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_DelayedArray.c -o R_init_DelayedArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compress_atomic_vector.c -o compress_atomic_vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o compress_atomic_vector.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPZ4l7V/R.INSTALL36662a22a0cb5/DelayedArray/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-DelayedArray/00new/DelayedArray/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘apply’ in package ‘DelayedArray’ Creating a new generic function for ‘sweep’ in package ‘DelayedArray’ Creating a new generic function for ‘scale’ in package ‘DelayedArray’ Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DelayedArray) begin installing package ‘SummarizedExperiment’ * installing *source* package ‘SummarizedExperiment’ ... ** this is package ‘SummarizedExperiment’ version ‘1.36.0’ ** package ‘SummarizedExperiment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SummarizedExperiment) begin installing package ‘MultiAssayExperiment’ begin installing package ‘MsFeatures’ * installing *source* package ‘MsFeatures’ ... ** this is package ‘MsFeatures’ version ‘1.14.0’ ** package ‘MsFeatures’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsFeatures) * installing *source* package ‘MultiAssayExperiment’ ... ** this is package ‘MultiAssayExperiment’ version ‘1.32.0’ ** package ‘MultiAssayExperiment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultiAssayExperiment) begin installing package ‘QFeatures’ * installing *source* package ‘QFeatures’ ... ** this is package ‘QFeatures’ version ‘1.16.0’ ** package ‘QFeatures’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘sweep’ in package ‘QFeatures’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (QFeatures) begin installing package ‘MsExperiment’ begin installing package ‘PSMatch’ * installing *source* package ‘PSMatch’ ... ** this is package ‘PSMatch’ version ‘1.10.0’ ** package ‘PSMatch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PSMatch) * installing *source* package ‘MsExperiment’ ... ** this is package ‘MsExperiment’ version ‘1.8.0’ ** package ‘MsExperiment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsExperiment) * installing *source* package ‘mzR’ ... ** this is package ‘mzR’ version ‘2.40.0’ ** package ‘mzR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpId0qZF/R.INSTALL36634b5b74f0e/mzR/src' rm -f RcppPwiz.o RcppPwizModule.o RcppIdent.o RcppIdentModule.o ./boost/libs/system/src/error_code.o ./boost/libs/regex/src/posix_api.o ./boost/libs/regex/src/regex_debug.o ./boost/libs/regex/src/regex.o ./boost/libs/regex/src/wide_posix_api.o ./boost/libs/regex/src/static_mutex.o ./boost/libs/iostreams/src/zlib.o ./boost/libs/iostreams/src/file_descriptor.o 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./pwiz/data/msdata/ChromatogramList_mz5.o ./pwiz/data/msdata/examples.o ./pwiz/data/msdata/Serializer_mzML.o ./pwiz/data/msdata/Serializer_MSn.o ./pwiz/data/msdata/Reader.o ./pwiz/data/msdata/Serializer_mz5.o ./pwiz/data/msdata/Serializer_MGF.o ./pwiz/data/msdata/Serializer_mzXML.o ./pwiz/data/msdata/SpectrumListBase.o ./pwiz/data/msdata/SpectrumList_MGF.o ./pwiz/data/msdata/SpectrumList_mzML.o ./pwiz/data/msdata/SpectrumList_MSn.o ./pwiz/data/msdata/SpectrumList_mz5.o ./pwiz/data/msdata/BinaryDataEncoder.o ./pwiz/data/msdata/Diff.o ./pwiz/data/msdata/MSData.o ./pwiz/data/msdata/References.o ./pwiz/data/msdata/SpectrumList_mzXML.o ./pwiz/data/msdata/IO.o ./pwiz/data/msdata/SpectrumList_BTDX.o ./pwiz/data/msdata/SpectrumInfo.o ./pwiz/data/msdata/LegacyAdapter.o ./pwiz/data/msdata/SpectrumIterator.o ./pwiz/data/msdata/MSDataFile.o ./pwiz/data/msdata/MSNumpress.o ./pwiz/data/msdata/SpectrumListCache.o ./pwiz/data/msdata/Index_mzML.o ./pwiz/data/msdata/SpectrumWorkerThreads.o ./pwiz/data/identdata/IdentDataFile.o ./pwiz/data/identdata/IdentData.o ./pwiz/data/identdata/DefaultReaderList.o ./pwiz/data/identdata/Reader.o ./pwiz/data/identdata/Serializer_protXML.o ./pwiz/data/identdata/Serializer_pepXML.o ./pwiz/data/identdata/Serializer_mzid.o ./pwiz/data/identdata/IO.o ./pwiz/data/identdata/References.o ./pwiz/data/identdata/MascotReader.o ./pwiz/data/proteome/Modification.o ./pwiz/data/proteome/Digestion.o ./pwiz/data/proteome/Peptide.o ./pwiz/data/proteome/AminoAcid.o ./pwiz/utility/minimxml/XMLWriter.o ./pwiz/utility/minimxml/SAXParser.o ./pwiz/utility/chemistry/Chemistry.o ./pwiz/utility/chemistry/ChemistryData.o ./pwiz/utility/chemistry/MZTolerance.o ./pwiz/utility/misc/IntegerSet.o ./pwiz/utility/misc/Base64.o ./pwiz/utility/misc/BinaryData.o ./pwiz/utility/misc/IterationListener.o ./pwiz/utility/misc/MSIHandler.o ./pwiz/utility/misc/Filesystem.o ./pwiz/utility/misc/TabReader.o ./pwiz/utility/misc/random_access_compressed_ifstream.o ./pwiz/utility/misc/SHA1.o ./pwiz/utility/misc/SHA1Calculator.o ./pwiz/utility/misc/sha1calc.o ./pwiz/utility/misc/String.o ./RcppExports.o ./boost/libs/thread/src/pthread/once.o ./boost/libs/thread/src/pthread/thread.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppPwiz.cpp -o RcppPwiz.o In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ RcppPwiz.cpp:408:57: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 408 | Rprintf("Index whichScan out of bounds [1 ... %d].\n", n_scans); | ~~ ^~~~~~~ | %zu RcppPwiz.cpp:778:10: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical] 778 | if ( (precursorScanNum[i] > 0) | (precursorMZ[i] > 0) ) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | || RcppPwiz.cpp:778:10: note: cast one or both operands to int to silence this warning RcppPwiz.cpp:854:63: warning: format specifies type 'int' but the argument has type 'size_t' (aka 'unsigned long') [-Wformat] 854 | Rprintf("Index whichChrom out of bounds [0 ... %d].\n", (clp->size())-1); | ~~ ^~~~~~~~~~~~~~~ | %zu In file included from RcppPwiz.cpp:1: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppPwizModule.cpp -o RcppPwizModule.o In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:12: In file included from ./pwiz/data/msdata/MSDataFile.hpp:30: In file included from ./pwiz/data/msdata/Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from RcppPwizModule.cpp:2: In file included from ./RcppPwiz.h:20: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppIdent.cpp -o RcppIdent.o In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:11: In file included from ./pwiz/data/identdata/IdentDataFile.hpp:29: In file included from ./pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from RcppIdent.cpp:1: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppIdentModule.cpp -o RcppIdentModule.o In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:11: In file included from ./pwiz/data/identdata/IdentDataFile.hpp:29: In file included from ./pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from RcppIdentModule.cpp:2: In file included from ./RcppIdent.h:14: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/system/src/error_code.cpp -o boost/libs/system/src/error_code.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/regex/src/posix_api.cpp -o boost/libs/regex/src/posix_api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/regex/src/regex_debug.cpp -o boost/libs/regex/src/regex_debug.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/regex/src/regex.cpp -o boost/libs/regex/src/regex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/regex/src/wide_posix_api.cpp -o boost/libs/regex/src/wide_posix_api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/regex/src/static_mutex.cpp -o boost/libs/regex/src/static_mutex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/iostreams/src/zlib.cpp -o boost/libs/iostreams/src/zlib.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/iostreams/src/file_descriptor.cpp -o boost/libs/iostreams/src/file_descriptor.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/operations.cpp -o boost/libs/filesystem/src/operations.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/directory.cpp -o boost/libs/filesystem/src/directory.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/exception.cpp -o boost/libs/filesystem/src/exception.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/path.cpp -o boost/libs/filesystem/src/path.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/unique_path.cpp -o boost/libs/filesystem/src/unique_path.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/filesystem/src/utf8_codecvt_facet.cpp -o boost/libs/filesystem/src/utf8_codecvt_facet.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/chrono/src/chrono.cpp -o boost/libs/chrono/src/chrono.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/chrono/src/process_cpu_clocks.cpp -o boost/libs/chrono/src/process_cpu_clocks.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/chrono/src/thread_clock.cpp -o boost/libs/chrono/src/thread_clock.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Version.cpp -o pwiz/data/msdata/Version.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/Version.cpp -o pwiz/data/identdata/Version.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/MemoryIndex.cpp -o pwiz/data/common/MemoryIndex.o In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/MemoryIndex.cpp:25: In file included from pwiz/data/common/MemoryIndex.hpp:26: In file included from pwiz/data/common/Index.hpp:30: In file included from ./boost/shared_ptr.hpp:17: In file included from ./boost/smart_ptr/shared_ptr.hpp:17: In file included from ./boost/smart_ptr/detail/shared_count.hpp:27: In file included from ./boost/smart_ptr/detail/sp_counted_impl.hpp:27: In file included from ./boost/checked_delete.hpp:15: ./boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'pwiz::data::MemoryIndex::Impl' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] 36 | delete x; | ^ ./boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete' requested here 154 | boost::checked_delete( p ); | ^ ./boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count' requested here 279 | boost::detail::shared_count( p ).swap( pn ); | ^ ./boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct' requested here 373 | boost::detail::sp_pointer_construct( this, p, pn ); | ^ pwiz/data/common/MemoryIndex.cpp:73:44: note: in instantiation of function template specialization 'boost::shared_ptr::shared_ptr' requested here 73 | PWIZ_API_DECL MemoryIndex::MemoryIndex() : impl_(new Impl) {} | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/CVTranslator.cpp -o pwiz/data/common/CVTranslator.o In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/common/CVTranslator.cpp:145:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ pwiz/data/common/CVTranslator.cpp:145:53: note: place parentheses around the '&&' expression to silence this warning 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ^ | ( ) pwiz/data/common/CVTranslator.cpp:146:40: warning: '&&' within '||' [-Wlogical-op-parentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~ 146 | key=="pi_" && value==MS_PI && cvid==UO_pi || // MS_PI==photoionization, UO_pi==3.14 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ pwiz/data/common/CVTranslator.cpp:146:40: note: place parentheses around the '&&' expression to silence this warning 146 | key=="pi_" && value==MS_PI && cvid==UO_pi || // MS_PI==photoionization, UO_pi==3.14 | ^ | ( ) pwiz/data/common/CVTranslator.cpp:147:40: warning: '&&' within '||' [-Wlogical-op-parentheses] 146 | key=="pi_" && value==MS_PI && cvid==UO_pi || // MS_PI==photoionization, UO_pi==3.14 | ~~ 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ pwiz/data/common/CVTranslator.cpp:147:40: note: place parentheses around the '&&' expression to silence this warning 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ^ | ( ) pwiz/data/common/CVTranslator.cpp:148:40: warning: '&&' within '||' [-Wlogical-op-parentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~ 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ pwiz/data/common/CVTranslator.cpp:148:40: note: place parentheses around the '&&' expression to silence this warning 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ^ | ( ) In file included from pwiz/data/common/CVTranslator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/cv.cpp -o pwiz/data/common/cv.o In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/common/cv.cpp:35: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/common/cv.cpp:34: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/ParamTypes.cpp -o pwiz/data/common/ParamTypes.o In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/common/ParamTypes.cpp:212:37: warning: unused variable 'it' [-Wunused-variable] 212 | vector::const_iterator it; | ^~ In file included from pwiz/data/common/ParamTypes.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/BinaryIndexStream.cpp -o pwiz/data/common/BinaryIndexStream.o In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/BinaryIndexStream.cpp:25: In file included from pwiz/data/common/BinaryIndexStream.hpp:26: In file included from pwiz/data/common/Index.hpp:30: In file included from ./boost/shared_ptr.hpp:17: In file included from ./boost/smart_ptr/shared_ptr.hpp:17: In file included from ./boost/smart_ptr/detail/shared_count.hpp:27: In file included from ./boost/smart_ptr/detail/sp_counted_impl.hpp:27: In file included from ./boost/checked_delete.hpp:15: ./boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'pwiz::data::BinaryIndexStream::Impl' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] 36 | delete x; | ^ ./boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete' requested here 154 | boost::checked_delete( p ); | ^ ./boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count' requested here 279 | boost::detail::shared_count( p ).swap( pn ); | ^ ./boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct' requested here 373 | boost::detail::sp_pointer_construct( this, p, pn ); | ^ pwiz/data/common/BinaryIndexStream.cpp:417:82: note: in instantiation of function template specialization 'boost::shared_ptr::shared_ptr' requested here 417 | PWIZ_API_DECL BinaryIndexStream::BinaryIndexStream(shared_ptr isPtr) : impl_(new Impl(isPtr)) {} | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/diff_std.cpp -o pwiz/data/common/diff_std.o In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/common/diff_std.cpp:27: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/common/Unimod.cpp -o pwiz/data/common/Unimod.o In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:19: In file included from ./boost_aux/boost/enum/base.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:19: In file included from ./boost_aux/boost/enum/base.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/common/Unimod.cpp:27: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const std::basic_string &, boost::algorithm::detail::token_finderF>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/common/Unimod.cpp:131:22: note: in instantiation of function template specialization 'boost::algorithm::split>, const std::basic_string &, boost::algorithm::detail::is_classifiedF>' requested here 131 | bal::split(formulaTokens, itr->second, bal::is_space()); | ^ In file included from pwiz/data/common/Unimod.cpp:25: In file included from pwiz/data/common/Unimod.hpp:31: In file included from ./boost_aux/boost/enum.hpp:20: In file included from ./boost_aux/boost/enum/bitfield.hpp:22: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const std::basic_string &, boost::algorithm::detail::token_finderF>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/common/Unimod.cpp:131:22: note: in instantiation of function template specialization 'boost::algorithm::split>, const std::basic_string &, boost::algorithm::detail::is_classifiedF>' requested here 131 | bal::split(formulaTokens, itr->second, bal::is_space()); | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/Configuration_mz5.cpp -o pwiz/data/msdata/mz5/Configuration_mz5.o In file included from pwiz/data/msdata/mz5/Configuration_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/mz5/Configuration_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/mz5/Configuration_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) 3 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/Connection_mz5.cpp -o pwiz/data/msdata/mz5/Connection_mz5.o In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/mz5/Connection_mz5.cpp:30: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/Datastructures_mz5.cpp -o pwiz/data/msdata/mz5/Datastructures_mz5.o In file included from pwiz/data/msdata/mz5/Datastructures_mz5.cpp:25: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/mz5/Datastructures_mz5.cpp:25: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/mz5/Datastructures_mz5.cpp:25: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) 3 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp -o pwiz/data/msdata/mz5/ReferenceRead_mz5.o In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.cpp:27: In file included from pwiz/data/msdata/mz5/../SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/mz5/../SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/ReferenceWrite_mz5.cpp -o pwiz/data/msdata/mz5/ReferenceWrite_mz5.o In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.cpp:24: In file included from pwiz/data/msdata/mz5/ReferenceWrite_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) 3 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/mz5/Translator_mz5.cpp -o pwiz/data/msdata/mz5/Translator_mz5.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/DefaultReaderList.cpp -o pwiz/data/msdata/DefaultReaderList.o In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:29: In file included from pwiz/data/msdata/DefaultReaderList.hpp:29: In file included from pwiz/data/msdata/Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/DefaultReaderList.cpp:30: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/ChromatogramList_mzML.cpp -o pwiz/data/msdata/ChromatogramList_mzML.o In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mzML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/ChromatogramList_mz5.cpp -o pwiz/data/msdata/ChromatogramList_mz5.o In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:28: In file included from pwiz/data/msdata/ChromatogramList_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/ChromatogramList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/examples.cpp -o pwiz/data/msdata/examples.o In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/examples.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Serializer_mzML.cpp -o pwiz/data/msdata/Serializer_mzML.o In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mzML.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Serializer_MSn.cpp -o pwiz/data/msdata/Serializer_MSn.o In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:28: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:28: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Serializer_MSn.cpp:25: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ pwiz/data/msdata/Serializer_MSn.cpp:44:11: warning: unused variable 'sizeChargeMSn' [-Wunused-const-variable] 44 | const int sizeChargeMSn = 12; // struct Charge{ int z; double mass; } | ^~~~~~~~~~~~~ pwiz/data/msdata/Serializer_MSn.cpp:45:11: warning: unused variable 'sizePeakMSn' [-Wunused-const-variable] 45 | const int sizePeakMSn = 12; // struct Peak{ double mz; float intensity; } | ^~~~~~~~~~~ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Reader.cpp -o pwiz/data/msdata/Reader.o In file included from pwiz/data/msdata/Reader.cpp:26: In file included from pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Reader.cpp:26: In file included from pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Reader.cpp:26: In file included from pwiz/data/msdata/Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Serializer_mz5.cpp -o pwiz/data/msdata/Serializer_mz5.o In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:28: In file included from pwiz/data/msdata/Serializer_mz5.hpp:32: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/Serializer_mz5.cpp:29: In file included from pwiz/data/msdata/SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/Serializer_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Serializer_MGF.cpp -o pwiz/data/msdata/Serializer_MGF.o In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:29: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:30: In file included from ./boost/variant/detail/initializer.hpp:21: In file included from ./boost/detail/reference_content.hpp:19: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 27 | : T::type | ^ ./boost/mpl/not.hpp:41:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd>' requested here 41 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::mpl::not_>' requested here 27 | : T::type | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:25:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>>' requested here 25 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T1)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:50:7: note: in instantiation of template class 'boost::mpl::aux::and_impl, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>, mpl_::bool_, mpl_::bool_, mpl_::bool_>' requested here 50 | : aux::and_impl< | ^ ./boost/mpl/iter_fold_if.hpp:42:11: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all) 42 | : and_< | ^ ./boost/mpl/iter_fold_if.hpp:85:9: note: in instantiation of template class 'boost::mpl::aux::iter_fold_if_impl, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect, boost::mpl::l_iter>>, mpl_::na, boost::mpl::always>>' requested here 85 | aux::iter_fold_if_impl< | ^ ./boost/mpl/iter_fold_if.hpp:102:20: note: in instantiation of member class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>::result_' requested here 102 | typename result_::state | ^ ./boost/variant/variant.hpp:190:27: note: in instantiation of template class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>' requested here 190 | typedef typename mpl::iter_fold_if< | ^ ./boost/variant/variant.hpp:1250:39: note: in instantiation of template class 'boost::detail::variant::find_fallback_type, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>' requested here 1250 | typedef typename detail::variant::find_fallback_type< | ^ ./boost/spirit/home/support/info.hpp:69:20: note: in instantiation of template class 'boost::variant, boost::recursive_wrapper, boost::recursive_wrapper>, boost::recursive_wrapper>>' requested here 69 | value_type value; | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:29: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:21: In file included from ./boost/spirit/home/karma/binary.hpp:13: In file included from ./boost/spirit/home/karma/binary/binary.hpp:15: In file included from ./boost/spirit/home/support/detail/endian.hpp:19: In file included from ./boost/endian/arithmetic.hpp:30: In file included from ./boost/endian/buffers.hpp:30: In file included from ./boost/endian/detail/endian_store.hpp:12: In file included from ./boost/endian/detail/is_trivially_copyable.hpp:11: ./boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins] 29 | BOOST_HAS_TRIVIAL_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN' 193 | # define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Serializer_mzXML.cpp -o pwiz/data/msdata/Serializer_mzXML.o In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:33: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:33: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Serializer_mzXML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumListBase.cpp -o pwiz/data/msdata/SpectrumListBase.o In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ ./boost/type_traits/has_trivial_constructor.hpp:51:68: note: in instantiation of template class 'boost::has_trivial_constructor, std::basic_string>>>' requested here 51 | template struct has_trivial_default_constructor : public has_trivial_constructor {}; | ^ ./boost/mpl/if.hpp:63:68: note: in instantiation of template class 'boost::has_trivial_default_constructor, std::basic_string>>>' requested here 63 | BOOST_MPL_AUX_STATIC_CAST(bool, BOOST_MPL_AUX_VALUE_WKND(T1)::value) | ^ ./boost/range/detail/default_constructible_unary_fn.hpp:71:34: note: in instantiation of template class 'boost::mpl::if_, std::basic_string>>>, boost::range_detail::select_first, std::basic_string>>, boost::range_detail::default_constructible_unary_fn_wrapper, std::basic_string>>, const std::basic_string &>>' requested here 71 | typedef typename boost::mpl::if_< | ^ ./boost/range/adaptor/transformed.hpp:31:26: note: in instantiation of template class 'boost::range_detail::default_constructible_unary_fn_gen, std::basic_string>>, const std::basic_string &>' requested here 31 | typename default_constructible_unary_fn_gen< | ^ ./boost/range/adaptor/transformed.hpp:42:26: note: in instantiation of template class 'boost::range_detail::transform_iterator_gen, std::basic_string>>, std::_Rb_tree_const_iterator, std::basic_string>>>' requested here 42 | typename transform_iterator_gen< | ^ ./boost/range/adaptor/map.hpp:65:22: note: in instantiation of template class 'boost::range_detail::transformed_range, std::basic_string>>, const std::map, std::basic_string>>' requested here 65 | : public transformed_range< | ^ pwiz/data/msdata/SpectrumListBase.cpp:62:38: note: in instantiation of template class 'boost::range_detail::select_first_range, std::basic_string>>' requested here 62 | auto actualIdKeys = actualId | boost::adaptors::map_keys; | ^ In file included from pwiz/data/msdata/SpectrumListBase.cpp:25: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_MGF.cpp -o pwiz/data/msdata/SpectrumList_MGF.o In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MGF.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/SpectrumList_MGF.cpp:243:38: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 243 | bal::split(charges, value, bal::is_any_of(" ")); | ^ In file included from pwiz/data/msdata/SpectrumList_MGF.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/SpectrumList_MGF.cpp:243:38: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 243 | bal::split(charges, value, bal::is_any_of(" ")); | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_mzML.cpp -o pwiz/data/msdata/SpectrumList_mzML.o In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:31: ./boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages] 36 | BOOST_PRAGMA_MESSAGE( | ^ ./boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE' 24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x))) | ^ :416:2: note: expanded from here 416 | message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " " + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.") | ^ In file included from pwiz/data/msdata/SpectrumList_mzML.cpp:26: In file included from pwiz/data/msdata/SpectrumList_mzML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_MSn.cpp -o pwiz/data/msdata/SpectrumList_MSn.o In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ pwiz/data/msdata/SpectrumList_MSn.cpp:641:12: warning: variable 'lineCount' set but not used [-Wunused-but-set-variable] 641 | size_t lineCount = 0; | ^ In file included from pwiz/data/msdata/SpectrumList_MSn.cpp:26: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_mz5.cpp -o pwiz/data/msdata/SpectrumList_mz5.o In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mz5.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:28: In file included from pwiz/data/msdata/SpectrumList_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/ReferenceRead_mz5.hpp:31: In file included from pwiz/data/msdata/mz5/Connection_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/Configuration_mz5.hpp:28: In file included from pwiz/data/msdata/mz5/../MSDataFile.hpp:30: In file included from pwiz/data/msdata/mz5/../Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/SpectrumList_mz5.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/BinaryDataEncoder.cpp -o pwiz/data/msdata/BinaryDataEncoder.o In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/BinaryDataEncoder.cpp:38: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Diff.cpp -o pwiz/data/msdata/Diff.o In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Diff.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ pwiz/data/msdata/Diff.cpp:321:21: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value] 321 | T current = fabs(*i - *j)/denominator; | ^ pwiz/data/msdata/Diff.cpp:355:20: note: in instantiation of function template specialization 'pwiz::data::diff_impl::maxdiff_and_index' requested here 355 | auto max = maxdiff_and_index(static_cast&>(a.data), | ^ pwiz/data/msdata/Diff.cpp:398:5: note: in instantiation of function template specialization 'pwiz::data::diff_impl::diffBinaryDataArray' requested here 398 | diffBinaryDataArray(a, b, a_b, b_a, config); | ^ pwiz/data/msdata/Diff.cpp:321:21: note: use function 'std::abs' instead 321 | T current = fabs(*i - *j)/denominator; | ^~~~ | std::abs 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/MSData.cpp -o pwiz/data/msdata/MSData.o In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/msdata/MSData.cpp:1115:1: warning: non-void function does not return a value in all control paths [-Wreturn-type] 1115 | } | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/MSData.cpp:508:12: note: in instantiation of function template specialization 'boost::algorithm::split>, const std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 508 | boost::split(pairs, id, boost::is_any_of(" \t\n\r")); | ^ In file included from pwiz/data/msdata/MSData.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/MSData.cpp:508:12: note: in instantiation of function template specialization 'boost::algorithm::split>, const std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 508 | boost::split(pairs, id, boost::is_any_of(" \t\n\r")); | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/References.cpp -o pwiz/data/msdata/References.o In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/References.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_mzXML.cpp -o pwiz/data/msdata/SpectrumList_mzXML.o In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:25: In file included from pwiz/data/msdata/SpectrumList_mzXML.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/SpectrumList_mzXML.cpp:163:35: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 163 | boost::algorithm::split(strCharges, possibleCharges, boost::is_any_of(",")); | ^ In file included from pwiz/data/msdata/SpectrumList_mzXML.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/msdata/SpectrumList_mzXML.cpp:163:35: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 163 | boost::algorithm::split(strCharges, possibleCharges, boost::is_any_of(",")); | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/IO.cpp -o pwiz/data/msdata/IO.o In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/msdata/IO.cpp:1660:2: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation] 1660 | bool zlib = false; // Handle numpress+zlib | ^ pwiz/data/msdata/IO.cpp:1657:5: note: previous statement is here 1657 | if (usedConfig.byteOrder == BinaryDataEncoder::ByteOrder_BigEndian) | ^ pwiz/data/msdata/IO.cpp:2132:35: warning: '&&' within '||' [-Wlogical-op-parentheses] 2132 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ pwiz/data/msdata/IO.cpp:2132:35: note: place parentheses around the '&&' expression to silence this warning 2132 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ^ | ( ) pwiz/data/msdata/IO.cpp:2836:31: warning: '&&' within '||' [-Wlogical-op-parentheses] 2836 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ pwiz/data/msdata/IO.cpp:2836:31: note: place parentheses around the '&&' expression to silence this warning 2836 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ^ | ( ) In file included from pwiz/data/msdata/IO.cpp:29: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumList_BTDX.cpp -o pwiz/data/msdata/SpectrumList_BTDX.o In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:13: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumList_BTDX.cpp:26: In file included from pwiz/data/msdata/SpectrumList_BTDX.hpp:30: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ pwiz/data/msdata/SpectrumList_BTDX.cpp:279:19: warning: private field 'msd_' is not used [-Wunused-private-field] 279 | const MSData& msd_; | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumInfo.cpp -o pwiz/data/msdata/SpectrumInfo.o In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumInfo.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/LegacyAdapter.cpp -o pwiz/data/msdata/LegacyAdapter.o In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:17: ./boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins] 29 | BOOST_HAS_TRIVIAL_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN' 193 | # define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:18: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:19: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:20: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:21: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:22: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:29: In file included from ./boost/lambda/lambda.hpp:14: In file included from ./boost/lambda/core.hpp:48: In file included from ./boost/lambda/detail/lambda_traits.hpp:18: In file included from ./boost/type_traits/object_traits.hpp:23: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/LegacyAdapter.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 33 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumIterator.cpp -o pwiz/data/msdata/SpectrumIterator.o In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/msdata/SpectrumIterator.cpp:125:20: warning: '&&' within '||' [-Wlogical-op-parentheses] 125 | return (done() && &that.spectrumList_==&pastEndMarker_ || | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ pwiz/data/msdata/SpectrumIterator.cpp:125:20: note: place parentheses around the '&&' expression to silence this warning 125 | return (done() && &that.spectrumList_==&pastEndMarker_ || | ^ | ( ) pwiz/data/msdata/SpectrumIterator.cpp:126:45: warning: '&&' within '||' [-Wlogical-op-parentheses] 125 | return (done() && &that.spectrumList_==&pastEndMarker_ || | ~~ 126 | &spectrumList_==&pastEndMarker_ && that.done() || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ pwiz/data/msdata/SpectrumIterator.cpp:126:45: note: place parentheses around the '&&' expression to silence this warning 126 | &spectrumList_==&pastEndMarker_ && that.done() || | ^ | ( ) pwiz/data/msdata/SpectrumIterator.cpp:127:49: warning: '&&' within '||' [-Wlogical-op-parentheses] 126 | &spectrumList_==&pastEndMarker_ && that.done() || | ~~ 127 | &spectrumList_==&that.spectrumList_ && currentIndex_==that.currentIndex_); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pwiz/data/msdata/SpectrumIterator.cpp:127:49: note: place parentheses around the '&&' expression to silence this warning 127 | &spectrumList_==&that.spectrumList_ && currentIndex_==that.currentIndex_); | ^ | ( ) pwiz/data/msdata/SpectrumIterator.cpp:141:34: warning: '&&' within '||' [-Wlogical-op-parentheses] 141 | return !scanNumbers_.empty() && currentScanNumber_==scanNumbers_.end() || | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ pwiz/data/msdata/SpectrumIterator.cpp:141:34: note: place parentheses around the '&&' expression to silence this warning 141 | return !scanNumbers_.empty() && currentScanNumber_==scanNumbers_.end() || | ^ | ( ) In file included from pwiz/data/msdata/SpectrumIterator.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/MSDataFile.cpp -o pwiz/data/msdata/MSDataFile.o In file included from pwiz/data/msdata/MSDataFile.cpp:26: In file included from pwiz/data/msdata/MSDataFile.hpp:30: In file included from pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:26: In file included from pwiz/data/msdata/MSDataFile.hpp:30: In file included from pwiz/data/msdata/Reader.hpp:29: In file included from ./pwiz/utility/chemistry/MzMobilityWindow.hpp:22: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:26: In file included from pwiz/data/msdata/MSDataFile.hpp:30: In file included from pwiz/data/msdata/Reader.hpp:29: ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 39 | return !mobilityBounds || | ~~ 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: note: place parentheses around the '&&' expression to silence this warning 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ^ | ( ) In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:36: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:36: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/MSDataFile.cpp:31: In file included from pwiz/data/msdata/Serializer_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumList_MSn.hpp:29: In file included from pwiz/data/msdata/SpectrumListBase.hpp:30: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/MSNumpress.cpp -o pwiz/data/msdata/MSNumpress.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumListCache.cpp -o pwiz/data/msdata/SpectrumListCache.o In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:28: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:29: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:30: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:30: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 39 | explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor::value) : t(t_) {} \ | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:29: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 69 | template struct has_nothrow_default_constructor : public has_nothrow_constructor{}; | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 40 | D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor::value) : t() {} \ | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:28: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 42 | D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign::value) {t = rhs.t; return *this;} \ | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:29: In file included from pwiz/data/msdata/SpectrumListWrapper.hpp:28: In file included from ./pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumListCache.cpp:25: In file included from pwiz/data/msdata/SpectrumListCache.hpp:28: In file included from pwiz/data/msdata/MemoryMRUCache.hpp:27: In file included from ./pwiz/utility/misc/mru_list.hpp:26: In file included from ./boost/multi_index/hashed_index.hpp:43: In file included from ./boost/multi_index/hashed_index_fwd.hpp:16: In file included from ./boost/multi_index/detail/hash_index_args.hpp:17: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 35 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/Index_mzML.cpp -o pwiz/data/msdata/Index_mzML.o In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/Index_mzML.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/msdata/SpectrumWorkerThreads.cpp -o pwiz/data/msdata/SpectrumWorkerThreads.o In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:27: In file included from ./pwiz/data/msdata/SpectrumListWrapper.hpp:28: In file included from ./pwiz/data/msdata/SpectrumListBase.hpp:31: In file included from ./boost/range/adaptor/map.hpp:14: In file included from ./boost/range/adaptor/transformed.hpp:15: In file included from ./boost/range/detail/default_constructible_unary_fn.hpp:15: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:28: ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp:47:14: warning: extra ';' inside a struct [-Wextra-semi] 47 | ); | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:30: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:30: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:30: In file included from ./pwiz/utility/misc/mru_list.hpp:25: In file included from ./boost/multi_index_container.hpp:36: In file included from ./boost/multi_index/detail/base_type.hpp:21: In file included from ./boost/multi_index/detail/index_base.hpp:33: In file included from ./boost/multi_index/detail/index_loader.hpp:22: In file included from ./boost/serialization/nvp.hpp:35: In file included from ./boost/serialization/split_free.hpp:22: In file included from ./boost/serialization/serialization.hpp:14: In file included from ./boost/serialization/strong_typedef.hpp:30: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_copy_constructor' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:39:54: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 39 | explicit D(const T& t_) BOOST_NOEXCEPT_IF(boost::has_nothrow_copy_constructor::value) : t(t_) {} \ | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/type_traits/has_nothrow_constructor.hpp:69:68: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 69 | template struct has_nothrow_default_constructor : public has_nothrow_constructor{}; | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_default_constructor' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:40:34: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 40 | D() BOOST_NOEXCEPT_IF(boost::has_nothrow_default_constructor::value) : t() {} \ | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ ./boost/serialization/serialization.hpp:52:1: note: in instantiation of template class 'boost::has_nothrow_assign' requested here 52 | BOOST_STRONG_TYPEDEF(unsigned int, version_type) | ^ ./boost/serialization/strong_typedef.hpp:42:57: note: expanded from macro 'BOOST_STRONG_TYPEDEF' 42 | D& operator=(const D& rhs) BOOST_NOEXCEPT_IF(boost::has_nothrow_assign::value) {t = rhs.t; return *this;} \ | ^ In file included from pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 36 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/IdentDataFile.cpp -o pwiz/data/identdata/IdentDataFile.o In file included from pwiz/data/identdata/IdentDataFile.cpp:25: In file included from pwiz/data/identdata/IdentDataFile.hpp:29: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/IdentDataFile.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/IdentData.cpp -o pwiz/data/identdata/IdentData.o In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/IdentData.cpp:31: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/IdentData.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/DefaultReaderList.cpp -o pwiz/data/identdata/DefaultReaderList.o In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:29: In file included from pwiz/data/identdata/DefaultReaderList.hpp:29: In file included from pwiz/data/identdata/Reader.hpp:28: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/DefaultReaderList.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/Reader.cpp -o pwiz/data/identdata/Reader.o In file included from pwiz/data/identdata/Reader.cpp:26: In file included from pwiz/data/identdata/Reader.hpp:28: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/Reader.cpp:27: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/Serializer_protXML.cpp -o pwiz/data/identdata/Serializer_protXML.o In file included from pwiz/data/identdata/Serializer_protXML.cpp:28: In file included from pwiz/data/identdata/Serializer_protXML.hpp:29: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/Serializer_protXML.cpp:40: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ pwiz/data/identdata/Serializer_protXML.cpp:97:9: warning: field 'strict' will be initialized after field 'nPeptides' [-Wreorder-ctor] 96 | ilr(iterationListenerRegistry), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | nPeptides(0) 97 | strict(strict), | ^~~~~~~~~~~~~~ | SourceFilesPtr(returnValueSourceFiles) 98 | nPeptides(0), | ~~~~~~~~~~~~ | ilr(iterationListenerRegistry) 99 | SourceFilesPtr(returnValueSourceFiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | strict(strict) In file included from pwiz/data/identdata/Serializer_protXML.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ pwiz/data/identdata/Serializer_protXML.cpp:476:10: warning: private field 'readSpectrumQueries' is not used [-Wunused-private-field] 476 | bool readSpectrumQueries; | ^ pwiz/data/identdata/Serializer_protXML.cpp:477:38: warning: private field 'ilr' is not used [-Wunused-private-field] 477 | const IterationListenerRegistry* ilr; | ^ 35 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/Serializer_pepXML.cpp -o pwiz/data/identdata/Serializer_pepXML.o In file included from pwiz/data/identdata/Serializer_pepXML.cpp:25: In file included from pwiz/data/identdata/Serializer_pepXML.hpp:27: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:36: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:36: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ ./boost/type_traits/has_trivial_constructor.hpp:51:68: note: in instantiation of template class 'boost::has_trivial_constructor' requested here 51 | template struct has_trivial_default_constructor : public has_trivial_constructor {}; | ^ ./boost/mpl/if.hpp:63:68: note: in instantiation of template class 'boost::has_trivial_default_constructor' requested here 63 | BOOST_MPL_AUX_STATIC_CAST(bool, BOOST_MPL_AUX_VALUE_WKND(T1)::value) | ^ ./boost/range/detail/default_constructible_unary_fn.hpp:71:34: note: in instantiation of template class 'boost::mpl::if_, pwiz::identdata::(anonymous namespace)::EnzymePtr_name, boost::range_detail::default_constructible_unary_fn_wrapper>>' requested here 71 | typedef typename boost::mpl::if_< | ^ ./boost/range/adaptor/transformed.hpp:31:26: note: in instantiation of template class 'boost::range_detail::default_constructible_unary_fn_gen>' requested here 31 | typename default_constructible_unary_fn_gen< | ^ ./boost/range/adaptor/transformed.hpp:42:26: note: in instantiation of template class 'boost::range_detail::transform_iterator_gen *, std::vector>>>' requested here 42 | typename transform_iterator_gen< | ^ pwiz/data/identdata/Serializer_pepXML.cpp:415:55: note: in instantiation of template class 'boost::range_detail::transformed_range>>' requested here 415 | string enzymeName = bal::join(sip.enzymes.enzymes | boost::adaptors::transformed(EnzymePtr_name()), " + "); | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:36: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ ./boost/type_traits/has_trivial_constructor.hpp:51:68: note: in instantiation of template class 'boost::has_trivial_constructor' requested here 51 | template struct has_trivial_default_constructor : public has_trivial_constructor {}; | ^ ./boost/mpl/if.hpp:63:68: note: in instantiation of template class 'boost::has_trivial_default_constructor' requested here 63 | BOOST_MPL_AUX_STATIC_CAST(bool, BOOST_MPL_AUX_VALUE_WKND(T1)::value) | ^ ./boost/range/detail/default_constructible_unary_fn.hpp:71:34: note: in instantiation of template class 'boost::mpl::if_, pwiz::identdata::(anonymous namespace)::EnzymePtr_specificity, boost::range_detail::default_constructible_unary_fn_wrapper>' requested here 71 | typedef typename boost::mpl::if_< | ^ ./boost/range/adaptor/transformed.hpp:31:26: note: in instantiation of template class 'boost::range_detail::default_constructible_unary_fn_gen' requested here 31 | typename default_constructible_unary_fn_gen< | ^ ./boost/range/adaptor/transformed.hpp:42:26: note: in instantiation of template class 'boost::range_detail::transform_iterator_gen *, std::vector>>>' requested here 42 | typename transform_iterator_gen< | ^ pwiz/data/identdata/Serializer_pepXML.cpp:418:73: note: in instantiation of template class 'boost::range_detail::transformed_range>>' requested here 418 | int minSpecificity = *boost::range::min_element(sip.enzymes.enzymes | boost::adaptors::transformed(EnzymePtr_specificity())); | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:36: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ ./boost/type_traits/has_trivial_constructor.hpp:51:68: note: in instantiation of template class 'boost::has_trivial_constructor' requested here 51 | template struct has_trivial_default_constructor : public has_trivial_constructor {}; | ^ ./boost/mpl/if.hpp:63:68: note: in instantiation of template class 'boost::has_trivial_default_constructor' requested here 63 | BOOST_MPL_AUX_STATIC_CAST(bool, BOOST_MPL_AUX_VALUE_WKND(T1)::value) | ^ ./boost/range/detail/default_constructible_unary_fn.hpp:71:34: note: in instantiation of template class 'boost::mpl::if_, pwiz::identdata::(anonymous namespace)::EnzymePtr_missedCleavages, boost::range_detail::default_constructible_unary_fn_wrapper>' requested here 71 | typedef typename boost::mpl::if_< | ^ ./boost/range/adaptor/transformed.hpp:31:26: note: in instantiation of template class 'boost::range_detail::default_constructible_unary_fn_gen' requested here 31 | typename default_constructible_unary_fn_gen< | ^ ./boost/range/adaptor/transformed.hpp:42:26: note: in instantiation of template class 'boost::range_detail::transform_iterator_gen *, std::vector>>>' requested here 42 | typename transform_iterator_gen< | ^ pwiz/data/identdata/Serializer_pepXML.cpp:504:81: note: in instantiation of template class 'boost::range_detail::transformed_range>>' requested here 504 | int maxMissedCleavages = *boost::range::max_element(sip.enzymes.enzymes | boost::adaptors::transformed(EnzymePtr_missedCleavages())); | ^ pwiz/data/identdata/Serializer_pepXML.cpp:561:104: warning: adding 'char' to a string does not append to the string [-Wstring-plus-int] 561 | default: throw runtime_error("[write_search_summary] Unsupported AA residue: " + aa); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ pwiz/data/identdata/Serializer_pepXML.cpp:561:104: note: use array indexing to silence this warning 561 | default: throw runtime_error("[write_search_summary] Unsupported AA residue: " + aa); | ^ | & [ ] In file included from pwiz/data/identdata/Serializer_pepXML.cpp:36: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ ./boost/type_traits/has_trivial_constructor.hpp:51:68: note: in instantiation of template class 'boost::has_trivial_constructor' requested here 51 | template struct has_trivial_default_constructor : public has_trivial_constructor {}; | ^ ./boost/mpl/if.hpp:63:68: note: in instantiation of template class 'boost::has_trivial_default_constructor' requested here 63 | BOOST_MPL_AUX_STATIC_CAST(bool, BOOST_MPL_AUX_VALUE_WKND(T1)::value) | ^ ./boost/range/detail/default_constructible_unary_fn.hpp:71:34: note: in instantiation of template class 'boost::mpl::if_, pwiz::identdata::(anonymous namespace)::CVParam_name, boost::range_detail::default_constructible_unary_fn_wrapper>>' requested here 71 | typedef typename boost::mpl::if_< | ^ ./boost/range/adaptor/transformed.hpp:31:26: note: in instantiation of template class 'boost::range_detail::default_constructible_unary_fn_gen>' requested here 31 | typename default_constructible_unary_fn_gen< | ^ ./boost/range/adaptor/transformed.hpp:42:26: note: in instantiation of template class 'boost::range_detail::transform_iterator_gen>>' requested here 42 | typename transform_iterator_gen< | ^ pwiz/data/identdata/Serializer_pepXML.cpp:586:65: note: in instantiation of template class 'boost::range_detail::transformed_range>' requested here 586 | string description = bal::join(possibleMods | boost::adaptors::transformed(CVParam_name()), ", "); | ^ pwiz/data/identdata/Serializer_pepXML.cpp:1546:5: warning: non-void function does not return a value in all control paths [-Wreturn-type] 1546 | } | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2, const char *, const char *>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2, const char *, const char *>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const char *const &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/identdata/Serializer_pepXML.cpp:113:18: note: in instantiation of function template specialization 'boost::algorithm::split>, const char *const &, boost::algorithm::detail::is_any_ofF>' requested here 113 | bal::split(names, ast.softwareNames, bal::is_any_of(";")); | ^ In file included from pwiz/data/identdata/Serializer_pepXML.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2, const char *, const char *>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2, const char *, const char *>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, const char *const &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/identdata/Serializer_pepXML.cpp:113:18: note: in instantiation of function template specialization 'boost::algorithm::split>, const char *const &, boost::algorithm::detail::is_any_ofF>' requested here 113 | bal::split(names, ast.softwareNames, bal::is_any_of(";")); | ^ pwiz/data/identdata/Serializer_pepXML.cpp:995:25: warning: private field '_cvTranslator' is not used [-Wunused-private-field] 995 | const CVTranslator& _cvTranslator; | ^ pwiz/data/identdata/Serializer_pepXML.cpp:1450:25: warning: private field '_cvTranslator' is not used [-Wunused-private-field] 1450 | const CVTranslator& _cvTranslator; | ^ pwiz/data/identdata/Serializer_pepXML.cpp:1796:25: warning: private field '_cvTranslator' is not used [-Wunused-private-field] 1796 | const CVTranslator& _cvTranslator; | ^ pwiz/data/identdata/Serializer_pepXML.cpp:1970:38: warning: private field 'ilr' is not used [-Wunused-private-field] 1970 | const IterationListenerRegistry* ilr; | ^ 44 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/Serializer_mzid.cpp -o pwiz/data/identdata/Serializer_mzid.o In file included from pwiz/data/identdata/Serializer_mzid.cpp:26: In file included from pwiz/data/identdata/Serializer_mzid.hpp:28: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/Serializer_mzid.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/IO.cpp -o pwiz/data/identdata/IO.o In file included from pwiz/data/identdata/IO.cpp:26: In file included from pwiz/data/identdata/IO.hpp:27: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/IO.cpp:30: In file included from ./pwiz/utility/misc/Filesystem.hpp:34: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/References.cpp -o pwiz/data/identdata/References.o In file included from pwiz/data/identdata/References.cpp:25: In file included from pwiz/data/identdata/References.hpp:29: In file included from pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/identdata/References.cpp:149:13: warning: add explicit braces to avoid dangling else [-Wdangling-else] 149 | BOOST_FOREACH(OrganizationPtr& org, static_cast(c.get())->affiliations) | ^ ./boost/foreach.hpp:1107:108: note: expanded from macro 'BOOST_FOREACH' 1107 | if (boost::foreach_detail_::auto_any_t BOOST_FOREACH_ID(_foreach_col) = BOOST_FOREACH_CONTAIN(COL)) {} else \ | ^ In file included from pwiz/data/identdata/References.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/identdata/MascotReader.cpp -o pwiz/data/identdata/MascotReader.o In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:26: In file included from pwiz/data/identdata/MascotReader.hpp:28: In file included from ./pwiz/data/identdata/Reader.hpp:28: In file included from ./pwiz/data/identdata/IdentData.hpp:30: In file included from ./pwiz/data/proteome/Digestion.hpp:32: In file included from ./pwiz/data/proteome/Peptide.hpp:183: ./pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/identdata/MascotReader.cpp:26: pwiz/data/identdata/MascotReader.hpp:62:11: warning: private field 'pimpl' is not used [-Wunused-private-field] 62 | Impl* pimpl; | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/proteome/Modification.cpp -o pwiz/data/proteome/Modification.o In file included from pwiz/data/proteome/Modification.cpp:27: pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/data/proteome/Modification.cpp:89:5: warning: 'auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 89 | auto_ptr formula_; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/backward/auto_ptr.h:291:7: note: 'auto_ptr' has been explicitly marked deprecated here 291 | } _GLIBCXX11_DEPRECATED_SUGGEST("std::unique_ptr"); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:108:45: note: expanded from macro '_GLIBCXX11_DEPRECATED_SUGGEST' 108 | # define _GLIBCXX11_DEPRECATED_SUGGEST(ALT) _GLIBCXX_DEPRECATED_SUGGEST(ALT) | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:100:19: note: expanded from macro '_GLIBCXX_DEPRECATED_SUGGEST' 100 | __attribute__ ((__deprecated__ ("use '" ALT "' instead"))) | ^ In file included from pwiz/data/proteome/Modification.cpp:30: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/proteome/Digestion.cpp -o pwiz/data/proteome/Digestion.o In file included from pwiz/data/proteome/Digestion.cpp:27: In file included from pwiz/data/proteome/Digestion.hpp:32: In file included from pwiz/data/proteome/Peptide.hpp:183: pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/proteome/Digestion.cpp:33: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>, boost::algorithm::is_equal>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>, boost::algorithm::is_equal>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>, boost::algorithm::is_equal>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>, boost::algorithm::is_equal>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:98:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>, boost::algorithm::is_equal>>' requested here 98 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:104:21: note: in instantiation of function template specialization 'boost::algorithm::find_iterator<__gnu_cxx::__normal_iterator>>::find_iterator>, boost::algorithm::is_equal>>' requested here 104 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:71:40: note: in instantiation of function template specialization 'boost::algorithm::iter_find>>>, const std::basic_string &, boost::algorithm::detail::first_finderF<__gnu_cxx::__normal_iterator>, boost::algorithm::is_equal>>' requested here 71 | return ::boost::algorithm::iter_find( | ^ pwiz/data/proteome/Digestion.cpp:468:14: note: in instantiation of function template specialization 'boost::algorithm::find_all>>>, const std::basic_string &, std::basic_string>' requested here 468 | bal::find_all(instances, sequence_, peptide.sequence()); | ^ In file included from pwiz/data/proteome/Digestion.cpp:32: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>, boost::algorithm::is_equal>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>, boost::algorithm::is_equal>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>, boost::algorithm::is_equal>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:98:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>, boost::algorithm::is_equal>>' requested here 98 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:104:21: note: in instantiation of function template specialization 'boost::algorithm::find_iterator<__gnu_cxx::__normal_iterator>>::find_iterator>, boost::algorithm::is_equal>>' requested here 104 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:71:40: note: in instantiation of function template specialization 'boost::algorithm::iter_find>>>, const std::basic_string &, boost::algorithm::detail::first_finderF<__gnu_cxx::__normal_iterator>, boost::algorithm::is_equal>>' requested here 71 | return ::boost::algorithm::iter_find( | ^ pwiz/data/proteome/Digestion.cpp:468:14: note: in instantiation of function template specialization 'boost::algorithm::find_all>>>, const std::basic_string &, std::basic_string>' requested here 468 | bal::find_all(instances, sequence_, peptide.sequence()); | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/proteome/Peptide.cpp -o pwiz/data/proteome/Peptide.o In file included from pwiz/data/proteome/Peptide.cpp:26: In file included from pwiz/data/proteome/Peptide.hpp:183: pwiz/data/proteome/Modification.hpp:189:18: warning: 'pwiz::proteome::ModificationMap::swap' hides overloaded virtual function [-Woverloaded-virtual] 189 | virtual void swap(ModificationMap&); | ^ ./pwiz/utility/misc/virtual_map.hpp:218:18: note: hidden overloaded virtual function 'pwiz::util::virtual_map::swap' declared here: type mismatch at 1st parameter ('virtual_map &' (aka 'virtual_map, std::allocator>> &') vs 'ModificationMap &') 218 | virtual void swap(virtual_map& x) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/proteome/Peptide.cpp:32: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/proteome/Peptide.cpp:337:13: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 337 | split(tokens, massStr, bal::is_any_of(",")); | ^ In file included from pwiz/data/proteome/Peptide.cpp:31: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ pwiz/data/proteome/Peptide.cpp:337:13: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 337 | split(tokens, massStr, bal::is_any_of(",")); | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/data/proteome/AminoAcid.cpp -o pwiz/data/proteome/AminoAcid.o In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:30: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/data/proteome/AminoAcid.cpp:27: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/minimxml/XMLWriter.cpp -o pwiz/utility/minimxml/XMLWriter.o In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:29: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:30: In file included from ./boost/variant/detail/initializer.hpp:21: In file included from ./boost/detail/reference_content.hpp:19: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:29: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:40: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 27 | : T::type | ^ ./boost/mpl/not.hpp:41:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd>' requested here 41 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::mpl::not_>' requested here 27 | : T::type | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:25:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>>' requested here 25 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T1)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:50:7: note: in instantiation of template class 'boost::mpl::aux::and_impl, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>, mpl_::bool_, mpl_::bool_, mpl_::bool_>' requested here 50 | : aux::and_impl< | ^ ./boost/mpl/iter_fold_if.hpp:42:11: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all) 42 | : and_< | ^ ./boost/mpl/iter_fold_if.hpp:85:9: note: in instantiation of template class 'boost::mpl::aux::iter_fold_if_impl, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect, boost::mpl::l_iter>>, mpl_::na, boost::mpl::always>>' requested here 85 | aux::iter_fold_if_impl< | ^ ./boost/mpl/iter_fold_if.hpp:102:20: note: in instantiation of member class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>::result_' requested here 102 | typename result_::state | ^ ./boost/variant/variant.hpp:190:27: note: in instantiation of template class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>' requested here 190 | typedef typename mpl::iter_fold_if< | ^ ./boost/variant/variant.hpp:1250:39: note: in instantiation of template class 'boost::detail::variant::find_fallback_type, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>' requested here 1250 | typedef typename detail::variant::find_fallback_type< | ^ ./boost/spirit/home/support/info.hpp:69:20: note: in instantiation of template class 'boost::variant, boost::recursive_wrapper, boost::recursive_wrapper>, boost::recursive_wrapper>>' requested here 69 | value_type value; | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:29: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:21: In file included from ./boost/spirit/home/karma/binary.hpp:13: In file included from ./boost/spirit/home/karma/binary/binary.hpp:15: In file included from ./boost/spirit/home/support/detail/endian.hpp:19: In file included from ./boost/endian/arithmetic.hpp:30: In file included from ./boost/endian/buffers.hpp:30: In file included from ./boost/endian/detail/endian_store.hpp:12: In file included from ./boost/endian/detail/is_trivially_copyable.hpp:11: ./boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins] 29 | BOOST_HAS_TRIVIAL_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN' 193 | # define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/minimxml/XMLWriter.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/minimxml/SAXParser.cpp -o pwiz/utility/minimxml/SAXParser.o In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/minimxml/SAXParser.cpp:29: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/chemistry/Chemistry.cpp -o pwiz/utility/chemistry/Chemistry.o In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:29: In file included from ./pwiz/utility/misc/Singleton.hpp:26: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/utility/chemistry/Chemistry.cpp:28: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/chemistry/ChemistryData.cpp -o pwiz/utility/chemistry/ChemistryData.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/chemistry/MZTolerance.cpp -o pwiz/utility/chemistry/MZTolerance.o In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/chemistry/MZTolerance.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/IntegerSet.cpp -o pwiz/utility/misc/IntegerSet.o In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/utility/misc/IntegerSet.cpp:307:63: warning: '&&' within '||' [-Wlogical-op-parentheses] 307 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ~~ pwiz/utility/misc/IntegerSet.cpp:307:63: note: place parentheses around the '&&' expression to silence this warning 307 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ^ | ( ) pwiz/utility/misc/IntegerSet.cpp:308:23: warning: '&&' within '||' [-Wlogical-op-parentheses] 307 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~ 308 | it_==end_ && that.it_==nothing_.end()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ pwiz/utility/misc/IntegerSet.cpp:308:23: note: place parentheses around the '&&' expression to silence this warning 308 | it_==end_ && that.it_==nothing_.end()); | ^ | ( ) In file included from pwiz/utility/misc/IntegerSet.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/Base64.cpp -o pwiz/utility/misc/Base64.o In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/Base64.cpp:26: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/BinaryData.cpp -o pwiz/utility/misc/BinaryData.o pwiz/utility/misc/BinaryData.cpp:303:9: warning: unknown pragma ignored [-Wunknown-pragmas] 303 | #pragma managed(push, off) | ^ pwiz/utility/misc/BinaryData.cpp:475:9: warning: unknown pragma ignored [-Wunknown-pragmas] 475 | #pragma managed(pop) | ^ 2 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/IterationListener.cpp -o pwiz/utility/misc/IterationListener.o In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/IterationListener.cpp:26: In file included from pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/MSIHandler.cpp -o pwiz/utility/misc/MSIHandler.o In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/MSIHandler.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/Filesystem.cpp -o pwiz/utility/misc/Filesystem.o In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:53: In file included from ./boost_aux/boost/utility/singleton.hpp:18: In file included from ./boost_aux/boost/utility/detail/member_dereference.hpp:32: In file included from ./boost/function_types/function_arity.hpp:12: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:58: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:30: In file included from ./boost/variant/detail/initializer.hpp:21: In file included from ./boost/detail/reference_content.hpp:19: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 27 | : T::type | ^ ./boost/mpl/not.hpp:41:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd>' requested here 41 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::mpl::not_>' requested here 27 | : T::type | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:25:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>>' requested here 25 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T1)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:50:7: note: in instantiation of template class 'boost::mpl::aux::and_impl, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>, mpl_::bool_, mpl_::bool_, mpl_::bool_>' requested here 50 | : aux::and_impl< | ^ ./boost/mpl/iter_fold_if.hpp:42:11: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all) 42 | : and_< | ^ ./boost/mpl/iter_fold_if.hpp:85:9: note: in instantiation of template class 'boost::mpl::aux::iter_fold_if_impl, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect, boost::mpl::l_iter>>, mpl_::na, boost::mpl::always>>' requested here 85 | aux::iter_fold_if_impl< | ^ ./boost/mpl/iter_fold_if.hpp:102:20: note: in instantiation of member class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>::result_' requested here 102 | typename result_::state | ^ ./boost/variant/variant.hpp:190:27: note: in instantiation of template class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>' requested here 190 | typedef typename mpl::iter_fold_if< | ^ ./boost/variant/variant.hpp:1250:39: note: in instantiation of template class 'boost::detail::variant::find_fallback_type, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>' requested here 1250 | typedef typename detail::variant::find_fallback_type< | ^ ./boost/spirit/home/support/info.hpp:69:20: note: in instantiation of template class 'boost::variant, boost::recursive_wrapper, boost::recursive_wrapper>, boost::recursive_wrapper>>' requested here 69 | value_type value; | ^ In file included from pwiz/utility/misc/Filesystem.cpp:58: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:21: In file included from ./boost/spirit/home/karma/binary.hpp:13: In file included from ./boost/spirit/home/karma/binary/binary.hpp:15: In file included from ./boost/spirit/home/support/detail/endian.hpp:19: In file included from ./boost/endian/arithmetic.hpp:30: In file included from ./boost/endian/buffers.hpp:30: In file included from ./boost/endian/detail/endian_store.hpp:12: In file included from ./boost/endian/detail/is_trivially_copyable.hpp:11: ./boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins] 29 | BOOST_HAS_TRIVIAL_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN' 193 | # define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/Filesystem.cpp:26: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/TabReader.cpp -o pwiz/utility/misc/TabReader.o In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ pwiz/utility/misc/TabReader.cpp:44:22: warning: assigning field to itself [-Wself-assign-field] 44 | comment_char = comment_char; | ^ In file included from pwiz/utility/misc/TabReader.cpp:25: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 31 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/random_access_compressed_ifstream.cpp -o pwiz/utility/misc/random_access_compressed_ifstream.o In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/SHA1.cpp -o pwiz/utility/misc/SHA1.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/SHA1Calculator.cpp -o pwiz/utility/misc/SHA1Calculator.o In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/SHA1Calculator.cpp:33: In file included from ./pwiz/utility/misc/Std.hpp:31: In file included from ./pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/sha1calc.cpp -o pwiz/utility/misc/sha1calc.o In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:30: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:30: In file included from pwiz/utility/misc/Filesystem.hpp:34: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/sha1calc.cpp:25: In file included from pwiz/utility/misc/unit.hpp:29: In file included from pwiz/utility/misc/DateTime.hpp:25: In file included from ./boost/date_time/local_time/local_time.hpp:19: In file included from ./boost/date_time/local_time/tz_database.hpp:14: In file included from ./boost/date_time/tz_db_base.hpp:24: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 30 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pwiz/utility/misc/String.cpp -o pwiz/utility/misc/String.o In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/String.cpp:24: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:30: In file included from ./boost/variant/detail/initializer.hpp:21: In file included from ./boost/detail/reference_content.hpp:19: ./boost/type_traits/has_nothrow_copy.hpp:36:89: warning: builtin __has_nothrow_copy is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 36 | template struct has_nothrow_copy_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:202:41: note: expanded from macro 'BOOST_HAS_NOTHROW_COPY' 202 | # define BOOST_HAS_NOTHROW_COPY(T) (__has_nothrow_copy(T) && !is_volatile::value && !is_reference::value && is_copy_constructible::value) | ^ In file included from pwiz/utility/misc/String.cpp:24: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:13: In file included from ./boost/spirit/home/karma/char.hpp:13: In file included from ./boost/spirit/home/karma/char/char.hpp:15: In file included from ./boost/spirit/home/support/string_traits.hpp:16: In file included from ./boost/spirit/home/support/container.hpp:21: In file included from ./boost/variant.hpp:17: In file included from ./boost/variant/variant.hpp:40: In file included from ./boost/blank.hpp:26: In file included from ./boost/type_traits/is_stateless.hpp:12: ./boost/type_traits/has_trivial_constructor.hpp:41:69: warning: builtin __has_trivial_constructor is deprecated; use __is_trivially_constructible instead [-Wdeprecated-builtins] 41 | : public integral_constant ::value || BOOST_HAS_TRIVIAL_CONSTRUCTOR(T)) BOOST_TT_TRIVIAL_CONSTRUCT_FIX)>{}; | ^ ./boost/type_traits/intrinsics.hpp:187:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_CONSTRUCTOR' 187 | # define BOOST_HAS_TRIVIAL_CONSTRUCTOR(T) __has_trivial_constructor(T) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:32: In file included from ./boost/format.hpp:38: In file included from ./boost/format/internals.hpp:21: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::has_nothrow_constructor' requested here 27 | : T::type | ^ ./boost/mpl/not.hpp:41:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd>' requested here 41 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:27:7: note: in instantiation of template class 'boost::mpl::not_>' requested here 27 | : T::type | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:25:11: note: in instantiation of template class 'boost::mpl::aux::nested_type_wknd, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>>' requested here 25 | BOOST_MPL_AUX_NESTED_TYPE_WKND(T1)::value | ^ ./boost/mpl/aux_/nested_type_wknd.hpp:38:24: note: expanded from macro 'BOOST_MPL_AUX_NESTED_TYPE_WKND' 38 | ::boost::mpl::aux::nested_type_wknd \ | ^ ./boost/mpl/aux_/preprocessed/gcc/and.hpp:50:7: note: in instantiation of template class 'boost::mpl::aux::and_impl, boost::mpl::l_iter, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>>, mpl_::bool_, mpl_::bool_, mpl_::bool_>' requested here 50 | : aux::and_impl< | ^ ./boost/mpl/iter_fold_if.hpp:42:11: note: (skipping 5 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all) 42 | : and_< | ^ ./boost/mpl/iter_fold_if.hpp:85:9: note: in instantiation of template class 'boost::mpl::aux::iter_fold_if_impl, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect, boost::mpl::l_iter>>, mpl_::na, boost::mpl::always>>' requested here 85 | aux::iter_fold_if_impl< | ^ ./boost/mpl/iter_fold_if.hpp:102:20: note: in instantiation of member class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>::result_' requested here 102 | typename result_::state | ^ ./boost/variant/variant.hpp:190:27: note: in instantiation of template class 'boost::mpl::iter_fold_if, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>, mpl_::int_<0>, boost::mpl::protect>, boost::mpl::protect>' requested here 190 | typedef typename mpl::iter_fold_if< | ^ ./boost/variant/variant.hpp:1250:39: note: in instantiation of template class 'boost::detail::variant::find_fallback_type, boost::spirit::info::nil_, boost::mpl::l_item, std::basic_string, boost::mpl::l_item, boost::recursive_wrapper, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_item, boost::recursive_wrapper>, boost::mpl::l_end>>>>>>' requested here 1250 | typedef typename detail::variant::find_fallback_type< | ^ ./boost/spirit/home/support/info.hpp:69:20: note: in instantiation of template class 'boost::variant, boost::recursive_wrapper, boost::recursive_wrapper>, boost::recursive_wrapper>>' requested here 69 | value_type value; | ^ In file included from pwiz/utility/misc/String.cpp:24: In file included from ./boost/spirit/include/karma.hpp:16: In file included from ./boost/spirit/home/karma.hpp:21: In file included from ./boost/spirit/home/karma/binary.hpp:13: In file included from ./boost/spirit/home/karma/binary/binary.hpp:15: In file included from ./boost/spirit/home/support/detail/endian.hpp:19: In file included from ./boost/endian/arithmetic.hpp:30: In file included from ./boost/endian/buffers.hpp:30: In file included from ./boost/endian/detail/endian_store.hpp:12: In file included from ./boost/endian/detail/is_trivially_copyable.hpp:11: ./boost/type_traits/has_trivial_assign.hpp:29:7: warning: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Wdeprecated-builtins] 29 | BOOST_HAS_TRIVIAL_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:193:43: note: expanded from macro 'BOOST_HAS_TRIVIAL_ASSIGN' 193 | # define BOOST_HAS_TRIVIAL_ASSIGN(T) (__has_trivial_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from pwiz/utility/misc/String.cpp:21: In file included from pwiz/utility/misc/String.hpp:31: In file included from ./boost/algorithm/string.hpp:23: In file included from ./boost/algorithm/string/split.hpp:16: In file included from ./boost/algorithm/string/iter_find.hpp:27: In file included from ./boost/algorithm/string/find_iterator.hpp:24: In file included from ./boost/algorithm/string/detail/find_iterator.hpp:18: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:21: In file included from ./boost/type_index.hpp:29: In file included from ./boost/type_index/stl_type_index.hpp:47: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ 34 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/thread/src/pthread/once.cpp -o boost/libs/thread/src/pthread/once.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./boost_aux/ -I./boost/ -I. -D_LARGEFILE_SOURCE -DHAVE_PWIZ_MZML_LIB -D_NODEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c boost/libs/thread/src/pthread/thread.cpp -o boost/libs/thread/src/pthread/thread.o In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:604:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 604 | BOOST_HASH_SPECIALIZE(bool) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:605:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 605 | BOOST_HASH_SPECIALIZE(char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:606:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 606 | BOOST_HASH_SPECIALIZE(signed char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:607:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 607 | BOOST_HASH_SPECIALIZE(unsigned char) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:609:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 609 | BOOST_HASH_SPECIALIZE(wchar_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:612:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 612 | BOOST_HASH_SPECIALIZE(char16_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:615:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 615 | BOOST_HASH_SPECIALIZE(char32_t) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:617:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 617 | BOOST_HASH_SPECIALIZE(short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:618:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 618 | BOOST_HASH_SPECIALIZE(unsigned short) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:619:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 619 | BOOST_HASH_SPECIALIZE(int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:620:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 620 | BOOST_HASH_SPECIALIZE(unsigned int) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:621:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 621 | BOOST_HASH_SPECIALIZE(long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:622:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 622 | BOOST_HASH_SPECIALIZE(unsigned long) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:624:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 624 | BOOST_HASH_SPECIALIZE(float) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:625:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 625 | BOOST_HASH_SPECIALIZE(double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:626:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 626 | BOOST_HASH_SPECIALIZE(long double) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:628:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 628 | BOOST_HASH_SPECIALIZE_REF(std::string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:630:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 630 | BOOST_HASH_SPECIALIZE_REF(std::wstring) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:633:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 633 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:636:5: note: in instantiation of template class 'boost::hash_detail::hash_base>' requested here 636 | BOOST_HASH_SPECIALIZE_REF(std::basic_string) | ^ ./boost/container_hash/hash.hpp:586:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE_REF' 586 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:653:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 653 | BOOST_HASH_SPECIALIZE(boost::long_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:654:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 654 | BOOST_HASH_SPECIALIZE(boost::ulong_long_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function<__int128, unsigned long>' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:658:5: note: in instantiation of template class 'boost::hash_detail::hash_base<__int128>' requested here 658 | BOOST_HASH_SPECIALIZE(boost::int128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function<__int128, unsigned long>' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:659:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 659 | BOOST_HASH_SPECIALIZE(boost::uint128_type) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:674:5: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 674 | BOOST_HASH_SPECIALIZE(std::type_index) | ^ ./boost/container_hash/hash.hpp:576:19: note: expanded from macro 'BOOST_HASH_SPECIALIZE' 576 | : public boost::hash_detail::hash_base \ | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:51: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:38: ./boost/type_traits/has_nothrow_constructor.hpp:27:84: warning: builtin __has_nothrow_constructor is deprecated; use __is_nothrow_constructible instead [-Wdeprecated-builtins] 27 | template struct has_nothrow_constructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:199:48: note: expanded from macro 'BOOST_HAS_NOTHROW_CONSTRUCTOR' 199 | # define BOOST_HAS_NOTHROW_CONSTRUCTOR(T) (__has_nothrow_constructor(T) && is_default_constructible::value) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:51: In file included from ./boost/optional.hpp:15: In file included from ./boost/optional/optional.hpp:47: In file included from ./boost/type_traits/is_nothrow_move_assignable.hpp:16: ./boost/type_traits/has_nothrow_assign.hpp:65:7: warning: builtin __has_nothrow_assign is deprecated; use __is_nothrow_assignable instead [-Wdeprecated-builtins] 65 | BOOST_HAS_NOTHROW_ASSIGN(T) | ^ ./boost/type_traits/intrinsics.hpp:205:43: note: expanded from macro 'BOOST_HAS_NOTHROW_ASSIGN' 205 | # define BOOST_HAS_NOTHROW_ASSIGN(T) (__has_nothrow_assign(T) && !is_volatile::value && is_assignable::value) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:65: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:65: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:11: In file included from ./boost/thread/thread_only.hpp:22: In file included from ./boost/thread/detail/thread.hpp:41: In file included from ./boost/functional/hash.hpp:6: ./boost/container_hash/hash.hpp:131:33: warning: 'unary_function' is deprecated [-Wdeprecated-declarations] 131 | struct hash_base : std::unary_function {}; | ^ ./boost/container_hash/hash.hpp:687:18: note: in instantiation of template class 'boost::hash_detail::hash_base' requested here 687 | : public boost::hash_detail::hash_base | ^ ./boost/container_hash/hash.hpp:415:24: note: in instantiation of template class 'boost::hash' requested here 415 | boost::hash hasher; | ^ ./boost/container_hash/hash.hpp:546:9: note: in instantiation of function template specialization 'boost::hash_combine' requested here 546 | hash_combine(seed, &v.category()); | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/stl_function.h:124:7: note: 'unary_function' has been explicitly marked deprecated here 124 | } _GLIBCXX11_DEPRECATED; | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:107:32: note: expanded from macro '_GLIBCXX11_DEPRECATED' 107 | # define _GLIBCXX11_DEPRECATED _GLIBCXX_DEPRECATED | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/x86_64-linux-gnu/c++/14/bits/c++config.h:98:46: note: expanded from macro '_GLIBCXX_DEPRECATED' 98 | # define _GLIBCXX_DEPRECATED __attribute__ ((__deprecated__)) | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:65: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:22: ./boost/type_traits/has_trivial_copy.hpp:34:4: warning: builtin __has_trivial_copy is deprecated; use __is_trivially_copyable instead [-Wdeprecated-builtins] 34 | BOOST_HAS_TRIVIAL_COPY(T) BOOST_TT_TRIVIAL_CONSTRUCT_FIX | ^ ./boost/type_traits/intrinsics.hpp:190:41: note: expanded from macro 'BOOST_HAS_TRIVIAL_COPY' 190 | # define BOOST_HAS_TRIVIAL_COPY(T) (__has_trivial_copy(T) && !is_reference::value) | ^ ./boost/type_traits/has_trivial_copy.hpp:57:65: note: in instantiation of template class 'boost::has_trivial_copy>>' requested here 57 | template struct has_trivial_copy_constructor : public has_trivial_copy{}; | ^ ./boost/function/function_template.hpp:945:20: note: in instantiation of template class 'boost::has_trivial_copy_constructor>>' requested here 945 | if (boost::has_trivial_copy_constructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ boost/libs/thread/src/pthread/thread.cpp:539:24: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 539 | boost::split(key_val, line, boost::is_any_of(":")); | ^ In file included from boost/libs/thread/src/pthread/thread.cpp:19: In file included from ./boost/thread/future.hpp:65: In file included from ./boost/function.hpp:30: In file included from ./boost/function/detail/prologue.hpp:17: In file included from ./boost/function/function_base.hpp:23: ./boost/type_traits/has_trivial_destructor.hpp:30:86: warning: builtin __has_trivial_destructor is deprecated; use __is_trivially_destructible instead [-Wdeprecated-builtins] 30 | template struct has_trivial_destructor : public integral_constant{}; | ^ ./boost/type_traits/intrinsics.hpp:196:47: note: expanded from macro 'BOOST_HAS_TRIVIAL_DESTRUCTOR' 196 | # define BOOST_HAS_TRIVIAL_DESTRUCTOR(T) (__has_trivial_destructor(T) && is_destructible::value) | ^ ./boost/function/function_template.hpp:946:20: note: in instantiation of template class 'boost::has_trivial_destructor>>' requested here 946 | boost::has_trivial_destructor::value && | ^ ./boost/function/function_template.hpp:720:13: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::assign_to>>' requested here 720 | this->assign_to(f); | ^ ./boost/algorithm/string/detail/find_iterator.hpp:51:21: note: in instantiation of function template specialization 'boost::function2>>, __gnu_cxx::__normal_iterator>, __gnu_cxx::__normal_iterator>>::function2>>' requested here 51 | m_Finder(Finder) {} | ^ ./boost/algorithm/string/find_iterator.hpp:261:17: note: in instantiation of function template specialization 'boost::algorithm::detail::find_iterator_base<__gnu_cxx::__normal_iterator>>::find_iterator_base>>' requested here 261 | detail::find_iterator_base(Finder,0), | ^ ./boost/algorithm/string/iter_find.hpp:178:21: note: in instantiation of function template specialization 'boost::algorithm::split_iterator<__gnu_cxx::__normal_iterator>>::split_iterator>>' requested here 178 | find_iterator_type( ::boost::begin(lit_input), InputEnd, Finder ), | ^ ./boost/algorithm/string/split.hpp:158:40: note: in instantiation of function template specialization 'boost::algorithm::iter_split>, std::basic_string &, boost::algorithm::detail::token_finderF>>' requested here 158 | return ::boost::algorithm::iter_split( | ^ boost/libs/thread/src/pthread/thread.cpp:539:24: note: in instantiation of function template specialization 'boost::algorithm::split>, std::basic_string &, boost::algorithm::detail::is_any_ofF>' requested here 539 | boost::split(key_val, line, boost::is_any_of(":")); | ^ 32 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mzR.so RcppPwiz.o RcppPwizModule.o RcppIdent.o RcppIdentModule.o ./boost/libs/system/src/error_code.o ./boost/libs/regex/src/posix_api.o ./boost/libs/regex/src/regex_debug.o ./boost/libs/regex/src/regex.o ./boost/libs/regex/src/wide_posix_api.o ./boost/libs/regex/src/static_mutex.o ./boost/libs/iostreams/src/zlib.o ./boost/libs/iostreams/src/file_descriptor.o ./boost/libs/filesystem/src/operations.o ./boost/libs/filesystem/src/directory.o ./boost/libs/filesystem/src/exception.o ./boost/libs/filesystem/src/path.o ./boost/libs/filesystem/src/unique_path.o ./boost/libs/filesystem/src/utf8_codecvt_facet.o ./boost/libs/chrono/src/chrono.o ./boost/libs/chrono/src/process_cpu_clocks.o ./boost/libs/chrono/src/thread_clock.o ./pwiz/data/msdata/Version.o ./pwiz/data/identdata/Version.o ./pwiz/data/common/MemoryIndex.o ./pwiz/data/common/CVTranslator.o ./pwiz/data/common/cv.o ./pwiz/data/common/ParamTypes.o ./pwiz/data/common/BinaryIndexStream.o ./pwiz/data/common/diff_std.o ./pwiz/data/common/Unimod.o ./pwiz/data/msdata/mz5/Configuration_mz5.o ./pwiz/data/msdata/mz5/Connection_mz5.o ./pwiz/data/msdata/mz5/Datastructures_mz5.o ./pwiz/data/msdata/mz5/ReferenceRead_mz5.o ./pwiz/data/msdata/mz5/ReferenceWrite_mz5.o ./pwiz/data/msdata/mz5/Translator_mz5.o ./pwiz/data/msdata/DefaultReaderList.o ./pwiz/data/msdata/ChromatogramList_mzML.o ./pwiz/data/msdata/ChromatogramList_mz5.o ./pwiz/data/msdata/examples.o ./pwiz/data/msdata/Serializer_mzML.o ./pwiz/data/msdata/Serializer_MSn.o ./pwiz/data/msdata/Reader.o ./pwiz/data/msdata/Serializer_mz5.o ./pwiz/data/msdata/Serializer_MGF.o ./pwiz/data/msdata/Serializer_mzXML.o ./pwiz/data/msdata/SpectrumListBase.o ./pwiz/data/msdata/SpectrumList_MGF.o ./pwiz/data/msdata/SpectrumList_mzML.o ./pwiz/data/msdata/SpectrumList_MSn.o ./pwiz/data/msdata/SpectrumList_mz5.o ./pwiz/data/msdata/BinaryDataEncoder.o ./pwiz/data/msdata/Diff.o ./pwiz/data/msdata/MSData.o ./pwiz/data/msdata/References.o ./pwiz/data/msdata/SpectrumList_mzXML.o ./pwiz/data/msdata/IO.o ./pwiz/data/msdata/SpectrumList_BTDX.o ./pwiz/data/msdata/SpectrumInfo.o ./pwiz/data/msdata/LegacyAdapter.o ./pwiz/data/msdata/SpectrumIterator.o ./pwiz/data/msdata/MSDataFile.o ./pwiz/data/msdata/MSNumpress.o ./pwiz/data/msdata/SpectrumListCache.o ./pwiz/data/msdata/Index_mzML.o ./pwiz/data/msdata/SpectrumWorkerThreads.o ./pwiz/data/identdata/IdentDataFile.o ./pwiz/data/identdata/IdentData.o ./pwiz/data/identdata/DefaultReaderList.o ./pwiz/data/identdata/Reader.o ./pwiz/data/identdata/Serializer_protXML.o ./pwiz/data/identdata/Serializer_pepXML.o ./pwiz/data/identdata/Serializer_mzid.o ./pwiz/data/identdata/IO.o ./pwiz/data/identdata/References.o ./pwiz/data/identdata/MascotReader.o ./pwiz/data/proteome/Modification.o ./pwiz/data/proteome/Digestion.o ./pwiz/data/proteome/Peptide.o ./pwiz/data/proteome/AminoAcid.o ./pwiz/utility/minimxml/XMLWriter.o ./pwiz/utility/minimxml/SAXParser.o ./pwiz/utility/chemistry/Chemistry.o ./pwiz/utility/chemistry/ChemistryData.o ./pwiz/utility/chemistry/MZTolerance.o ./pwiz/utility/misc/IntegerSet.o ./pwiz/utility/misc/Base64.o ./pwiz/utility/misc/BinaryData.o ./pwiz/utility/misc/IterationListener.o ./pwiz/utility/misc/MSIHandler.o ./pwiz/utility/misc/Filesystem.o ./pwiz/utility/misc/TabReader.o ./pwiz/utility/misc/random_access_compressed_ifstream.o ./pwiz/utility/misc/SHA1.o ./pwiz/utility/misc/SHA1Calculator.o ./pwiz/utility/misc/sha1calc.o ./pwiz/utility/misc/String.o ./RcppExports.o ./boost/libs/thread/src/pthread/once.o ./boost/libs/thread/src/pthread/thread.o -lpthread /home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/lib/libhdf5_cpp.a /home/hornik/tmp/CRAN_special_clang-san/Library/Rhdf5lib/lib/libhdf5.a -lcrypto -lcurl -lsz -laec -lz -ldl -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpId0qZF/R.INSTALL36634b5b74f0e/mzR/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mzR/00new/mzR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f22f8167191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7f22f85339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7f22f8521faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7f22f850a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7f22f850106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7f22f84f9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7f22f7d0ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7f22f7d1507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7f22f7c93476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7f22f739ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7f22f739ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7f2311ea129d in call_init elf/dl-init.c:74:3 #12 0x7f2311ea129d in call_init elf/dl-init.c:26:1 #13 0x7f2311ea138b in _dl_init elf/dl-init.c:121:5 #14 0x7f2311e9e535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7f2311ea7f2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7f2311e9e4a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7f2311ea82a7 in _dl_open elf/dl-open.c:880:17 #18 0x7f23107b1f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7f2311e9e4a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7f2311e9e5ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7f23107b1aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7f23107b2048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7f23107b2048 in dlopen dlfcn/dlopen.c:81:12 #24 0x564448fcb2f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7f23111127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7f2311111bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7f23114ed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7f23114a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7f23114a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7f23114aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7f23114a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7f23114a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7f23114a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7f23115e4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #35 0x7f23115e7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #36 0x7f23115e75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #37 0x7f23115e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #38 0x56444904add4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #39 0x7f231074dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #40 0x7f231074de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #41 0x564448f67370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f22f8162679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7f22f84d9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7f22f8161dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7f22f850c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7f22f7d0ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7f22f7d151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7f22f7c92fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7f2310766260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7f2310766319 in exit stdlib/exit.c:138:3 #9 0x7f23119971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7f23119a1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7f23115e75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7f23115e75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7f23115e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x56444904add4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7f231074dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7f231074de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x564448f67370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f7080f67191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7f70813339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7f7081321faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7f708130a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7f708130106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7f70812f9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7f7080b0ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7f7080b1507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7f7080a93476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7f708019ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7f708019ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7f709ae6929d in call_init elf/dl-init.c:74:3 #12 0x7f709ae6929d in call_init elf/dl-init.c:26:1 #13 0x7f709ae6938b in _dl_init elf/dl-init.c:121:5 #14 0x7f709ae66535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7f709ae6ff2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7f709ae664a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7f709ae702a7 in _dl_open elf/dl-open.c:880:17 #18 0x7f7099697f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7f709ae664a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7f709ae665ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7f7099697aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7f7099698048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7f7099698048 in dlopen dlfcn/dlopen.c:81:12 #24 0x5596ef2402f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7f7099f127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7f7099f11bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7f709a2ed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7f709a2a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7f709a2a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7f709a2aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7f709a2a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7f709a2a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7f709a2a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7f709a3e4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #35 0x7f709a3e7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #36 0x7f709a3e75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #37 0x7f709a3e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #38 0x5596ef2bfdd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #39 0x7f7099633d67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #40 0x7f7099633e24 in __libc_start_main csu/../csu/libc-start.c:360:3 #41 0x5596ef1dc370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f7080f62679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7f70812d9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7f7080f61dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7f708130c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7f7080b0ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7f7080b151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7f7080a92fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7f709964c260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7f709964c319 in exit stdlib/exit.c:138:3 #9 0x7f709a7971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7f709a7a1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7f709a3e75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7f709a3e75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7f709a3e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x5596ef2bfdd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7f7099633d67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7f7099633e24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x5596ef1dc370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 ** testing if installed package keeps a record of temporary installation path * DONE (mzR) begin installing package ‘MSnbase’ * installing *source* package ‘MSnbase’ ... ** this is package ‘MSnbase’ version ‘2.32.0’ ** package ‘MSnbase’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDVbUOt/R.INSTALL36713d21d74ff6/MSnbase/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Spectrum1_class.c -o Spectrum1_class.o Spectrum1_class.c:8:13: warning: unused function '_new_Spectrum1' [-Wunused-function] 8 | static SEXP _new_Spectrum1(SEXP msLevel, SEXP peaksCount, SEXP rt, | ^~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Spectrum2_class.c -o Spectrum2_class.o Spectrum2_class.c:9:13: warning: unused function '_new_Spectrum2' [-Wunused-function] 9 | static SEXP _new_Spectrum2(SEXP msLevel, SEXP peaksCount, SEXP rt, | ^~~~~~~~~~~~~~ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imp_neighbour_avg.cpp -o imp_neighbour_avg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o utils.c:92:15: warning: unused variable 'ret' [-Wunused-variable] 92 | int i1, i2, ret; | ^~~ utils.c:107:15: warning: unused variable 'ret' [-Wunused-variable] 107 | int i1, i2, ret; | ^~~ utils.c:123:18: warning: unused variable 'ret' [-Wunused-variable] 123 | double d1, d2, ret; | ^~~ utils.c:133:18: warning: unused variable 'ret' [-Wunused-variable] 133 | double d1, d2, ret; | ^~~ utils.c:121:12: warning: unused function 'compar_double_asc_order' [-Wunused-function] 121 | static int compar_double_asc_order(const void *p1, const void *p2) | ^~~~~~~~~~~~~~~~~~~~~~~ utils.c:131:12: warning: unused function 'compar_double_desc_order' [-Wunused-function] 131 | static int compar_double_desc_order(const void *p1, const void *p2) | ^~~~~~~~~~~~~~~~~~~~~~~~ 6 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o MSnbase.so RcppExports.o Spectrum1_class.o Spectrum2_class.o imp_neighbour_avg.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDVbUOt/R.INSTALL36713d21d74ff6/MSnbase/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-MSnbase/00new/MSnbase/libs ** R ** data *** moving datasets to lazyload DB H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7fa0dbf67191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7fa0dc3339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7fa0dc321faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7fa0dc30a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7fa0dc30106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7fa0dc2f9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7fa0dbb0ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7fa0dbb1507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7fa0dba93476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7fa0db19ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7fa0db19ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7fa10049c29d in call_init elf/dl-init.c:74:3 #12 0x7fa10049c29d in call_init elf/dl-init.c:26:1 #13 0x7fa10049c38b in _dl_init elf/dl-init.c:121:5 #14 0x7fa100499535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7fa1004a2f2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7fa1004994a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7fa1004a32a7 in _dl_open elf/dl-open.c:880:17 #18 0x7fa0fedb1f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7fa1004994a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7fa1004995ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7fa0fedb1aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7fa0fedb2048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7fa0fedb2048 in dlopen dlfcn/dlopen.c:81:12 #24 0x5569701f72f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7fa0ff7127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7fa0ff711bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7fa0ffaed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7fa0ffaa1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7fa0ffaa061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7fa0ffaa251f in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #31 0x7fa0ffaa074e in Rf_eval /home/hornik/src/R/src/main/eval.c:1193:2 #32 0x7fa0ffaf6cc2 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8016:16 #33 0x7fa0ffaa1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #34 0x7fa0ffaa061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #35 0x7fa0ffaaad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #36 0x7fa0ffaa686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #37 0x7fa0ffaa0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #38 0x7fa0ffaa0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #39 0x7fa0ffdae001 in R_FindNamespace1 /home/hornik/src/R/src/main/serialize.c:1793:11 #40 0x7fa0ffdae001 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1926:6 #41 0x7fa0ffdaf2d0 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #42 0x7fa0ffdaf2d0 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1941:20 #43 0x7fa0ffdaf2d0 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #44 0x7fa0ffdaf2d0 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1941:20 #45 0x7fa0ffdaf2d0 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #46 0x7fa0ffdaf2d0 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1941:20 #47 0x7fa0ffdacf64 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #48 0x7fa0ffdacf64 in ReadItem_Iterative /home/hornik/src/R/src/main/serialize.c:1837:12 #49 0x7fa0ffdacf64 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1963:9 #50 0x7fa0ffdb198d in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #51 0x7fa0ffdb198d in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:2107:30 #52 0x7fa0ffdacf64 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #53 0x7fa0ffdacf64 in ReadItem_Iterative /home/hornik/src/R/src/main/serialize.c:1837:12 #54 0x7fa0ffdacf64 in ReadItem_Recursive /home/hornik/src/R/src/main/serialize.c:1963:9 #55 0x7fa0ffd9cff0 in ReadItem /home/hornik/src/R/src/main/serialize.c:2120:12 #56 0x7fa0ffd9cff0 in R_Unserialize /home/hornik/src/R/src/main/serialize.c:2277:12 #57 0x7fa0ffd5b0ce in do_loadFromConn2 /home/hornik/src/R/src/main/saveload.c:2491:25 #58 0x7fa0ffaed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #59 0x7fa0ffaa1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #60 0x7fa0ffaa061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #61 0x7fa0ffaaad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #62 0x7fa0ffaa686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #63 0x7fa0ffaa0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #64 0x7fa0ffaa0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #65 0x7fa0ffbe4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #66 0x7fa0ffbe7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #67 0x7fa0ffbe75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #68 0x7fa0ffbe785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #69 0x556970276dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #70 0x7fa0fed4dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #71 0x7fa0fed4de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #72 0x556970193370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 Creating a new generic function for ‘trimws’ in package ‘MSnbase’ in method for ‘coerce’ with signature ‘"IBSpectra","MSnSet"’: no definition for class “IBSpectra” in method for ‘plotMzDelta’ with signature ‘"mzRramp"’: no definition for class “mzRramp” ** inst ** byte-compile and prepare package for lazy loading H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f68df567191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7f68df9339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7f68df921faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7f68df90a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7f68df90106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7f68df8f9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7f68df10ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7f68df11507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7f68df093476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7f68de79ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7f68de79ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7f68fd2ad29d in call_init elf/dl-init.c:74:3 #12 0x7f68fd2ad29d in call_init elf/dl-init.c:26:1 #13 0x7f68fd2ad38b in _dl_init elf/dl-init.c:121:5 #14 0x7f68fd2aa535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7f68fd2b3f2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7f68fd2aa4a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7f68fd2b42a7 in _dl_open elf/dl-open.c:880:17 #18 0x7f68fbbb1f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7f68fd2aa4a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7f68fd2aa5ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7f68fbbb1aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7f68fbbb2048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7f68fbbb2048 in dlopen dlfcn/dlopen.c:81:12 #24 0x557a401092f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7f68fc5127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7f68fc511bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7f68fc8ed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7f68fc8a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7f68fc8a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7f68fc8aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7f68fc8a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7f68fc8a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7f68fc8a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7f68fc8a251f in forcePromise /home/hornik/src/R/src/main/eval.c:976:13 #35 0x7f68fc93d8af in getvar /home/hornik/src/R/src/main/eval.c:5839:6 #36 0x7f68fc90d376 in bcEval_loop /home/hornik/src/R/src/main/eval.c:7852:20 #37 0x7f68fc8a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #38 0x7f68fc8a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #39 0x7f68fc8aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #40 0x7f68fc8a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #41 0x7f68fc8a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #42 0x7f68fc8a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #43 0x7f68fc9e4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #44 0x7f68fc9e7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #45 0x7f68fc9e75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #46 0x7f68fc9e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #47 0x557a40188dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #48 0x7f68fbb4dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #49 0x7f68fbb4de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #50 0x557a400a5370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 Creating a new generic function for ‘trimws’ in package ‘MSnbase’ in method for ‘coerce’ with signature ‘"IBSpectra","MSnSet"’: no definition for class “IBSpectra” in method for ‘plotMzDelta’ with signature ‘"mzRramp"’: no definition for class “mzRramp” H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7f68df562679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7f68df8d9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7f68df561dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7f68df90c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7f68df10ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7f68df1151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7f68df092fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7f68fbb66260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7f68fbb66319 in exit stdlib/exit.c:138:3 #9 0x7f68fcd971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7f68fcda1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7f68fc9e75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7f68fc9e75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7f68fc9e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x557a40188dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7f68fbb4dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7f68fbb4de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x557a400a5370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7ff0b1b67191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7ff0b1f339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7ff0b1f21faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7ff0b1f0a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7ff0b1f0106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7ff0b1ef9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7ff0b170ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7ff0b171507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7ff0b1693476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7ff0b0d9ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7ff0b0d9ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7ff0cfa8929d in call_init elf/dl-init.c:74:3 #12 0x7ff0cfa8929d in call_init elf/dl-init.c:26:1 #13 0x7ff0cfa8938b in _dl_init elf/dl-init.c:121:5 #14 0x7ff0cfa86535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7ff0cfa8ff2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7ff0cfa864a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7ff0cfa902a7 in _dl_open elf/dl-open.c:880:17 #18 0x7ff0ce3b1f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7ff0cfa864a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7ff0cfa865ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7ff0ce3b1aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7ff0ce3b2048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7ff0ce3b2048 in dlopen dlfcn/dlopen.c:81:12 #24 0x5568b298c2f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7ff0ced127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7ff0ced11bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7ff0cf0ed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7ff0cf0a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7ff0cf0a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7ff0cf0aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7ff0cf0a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7ff0cf0a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7ff0cf0a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7ff0cf1e4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #35 0x7ff0cf1e7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #36 0x7ff0cf1e75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #37 0x7ff0cf1e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #38 0x5568b2a0bdd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #39 0x7ff0ce34dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #40 0x7ff0ce34de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #41 0x5568b2928370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7ff0b1b62679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7ff0b1ed9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7ff0b1b61dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7ff0b1f0c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7ff0b170ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7ff0b17151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7ff0b1692fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7ff0ce366260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7ff0ce366319 in exit stdlib/exit.c:138:3 #9 0x7ff0cf5971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7ff0cf5a1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7ff0cf1e75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7ff0cf1e75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7ff0cf1e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x5568b2a0bdd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7ff0ce34dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7ff0ce34de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x5568b2928370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location H5I.c:1261:41: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7fb0fcd67191 in H5I_dec_ref /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:1261:41 #1 0x7fb0fd1339e3 in H5T__path_find_real /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:4842:13 #2 0x7fb0fd121faa in H5T__register /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2333:36 #3 0x7fb0fd10a3da in H5T__register_int /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:2282:8 #4 0x7fb0fd10106d in H5T__init_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1048:15 #5 0x7fb0fd0f9e70 in H5T_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:578:5 #6 0x7fb0fc90ee62 in H5_init_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:218:8 #7 0x7fb0fc91507c in H5open /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:930:5 #8 0x7fb0fc893476 in H5::FileAccPropList::getConstant() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:66:40 #9 0x7fb0fbf9ed86 in __cxx_global_var_init /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp:88:52 #10 0x7fb0fbf9ed86 in _GLOBAL__sub_I_H5FaccProp.cpp /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5FaccProp.cpp #11 0x7fb11ab8829d in call_init elf/dl-init.c:74:3 #12 0x7fb11ab8829d in call_init elf/dl-init.c:26:1 #13 0x7fb11ab8838b in _dl_init elf/dl-init.c:121:5 #14 0x7fb11ab85535 in _dl_catch_exception elf/dl-catch.c:215:7 #15 0x7fb11ab8ef2d in dl_open_worker elf/dl-open.c:804:5 #16 0x7fb11ab854a8 in _dl_catch_exception elf/dl-catch.c:241:8 #17 0x7fb11ab8f2a7 in _dl_open elf/dl-open.c:880:17 #18 0x7fb119497f97 in dlopen_doit dlfcn/dlopen.c:56:15 #19 0x7fb11ab854a8 in _dl_catch_exception elf/dl-catch.c:241:8 #20 0x7fb11ab855ce in _dl_catch_error elf/dl-catch.c:260:19 #21 0x7fb119497aa6 in _dlerror_run dlfcn/dlerror.c:138:17 #22 0x7fb119498048 in dlopen_implementation dlfcn/dlopen.c:71:10 #23 0x7fb119498048 in dlopen dlfcn/dlopen.c:81:12 #24 0x55e3bf7b22f6 in dlopen (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x8f2f6) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) #25 0x7fb119d127cf in AddDLL /home/hornik/src/R/src/main/Rdynload.c:855:14 #26 0x7fb119d11bd7 in do_dynload /home/hornik/src/R/src/main/Rdynload.c:1229:12 #27 0x7fb11a0ed889 in bcEval_loop /home/hornik/src/R/src/main/eval.c:8122:14 #28 0x7fb11a0a1ee4 in bcEval /home/hornik/src/R/src/main/eval.c:7505:16 #29 0x7fb11a0a061f in Rf_eval /home/hornik/src/R/src/main/eval.c:1167:8 #30 0x7fb11a0aad75 in R_execClosure /home/hornik/src/R/src/main/eval.c:2393:22 #31 0x7fb11a0a686c in applyClosure_core /home/hornik/src/R/src/main/eval.c:2306:16 #32 0x7fb11a0a0f9f in Rf_applyClosure /home/hornik/src/R/src/main/eval.c:2328:16 #33 0x7fb11a0a0f9f in Rf_eval /home/hornik/src/R/src/main/eval.c:1280:12 #34 0x7fb11a1e4977 in Rf_ReplIteration /home/hornik/src/R/src/main/main.c:265:2 #35 0x7fb11a1e7790 in R_ReplConsole /home/hornik/src/R/src/main/main.c:317:11 #36 0x7fb11a1e75b4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1219:5 #37 0x7fb11a1e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #38 0x55e3bf831dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #39 0x7fb119433d67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #40 0x7fb119433e24 in __libc_start_main csu/../csu/libc-start.c:360:3 #41 0x55e3bf74e370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:1261:41 H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7fb0fcd62679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7fb0fd0d9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7fb0fcd61dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7fb0fd10c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7fb0fc90ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7fb0fc9151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7fb0fc892fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7fb11944c260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7fb11944c319 in exit stdlib/exit.c:138:3 #9 0x7fb11a5971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7fb11a5a1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7fb11a1e75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7fb11a1e75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7fb11a1e785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x55e3bf831dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7fb119433d67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7fb119433e24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x55e3bf74e370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 ** testing if installed package keeps a record of temporary installation path * DONE (MSnbase) H5I.c:548:47: runtime error: call to function H5T__close_cb through pointer to incorrect function type 'int (*)(void *)' /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:3848: note: H5T__close_cb defined here #0 0x7fa0dbf62679 in H5I__clear_type_cb /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:548:47 #1 0x7fa0dc2d9127 in H5SL_try_free_safe /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5SL.c:2369:26 #2 0x7fa0dbf61dd7 in H5I_clear_type /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5I.c:508:8 #3 0x7fa0dc30c9a2 in H5T_top_term_package /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5T.c:1444:19 #4 0x7fa0dbb0ff61 in H5_term_library /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:310:20 #5 0x7fa0dbb151a0 in H5close /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/src/H5.c:960:5 #6 0x7fa0dba92fe0 in H5::H5Library::termH5cpp() /home/hornik/tmp/scratch/Rtmp5xR406/R.INSTALL35bf38599e7a40/Rhdf5lib/src/hdf5/c++/src/H5Library.cpp:235:24 #7 0x7fa0fed66260 in __run_exit_handlers stdlib/exit.c:108:8 #8 0x7fa0fed66319 in exit stdlib/exit.c:138:3 #9 0x7fa0fff971bc in Rstd_CleanUp /home/hornik/src/R/src/unix/sys-std.c:1301:5 #10 0x7fa0fffa1417 in R_CleanUp /home/hornik/src/R/src/unix/system.c:87:5 #11 0x7fa0ffbe75e4 in end_Rmainloop /home/hornik/src/R/src/main/main.c:1209:5 #12 0x7fa0ffbe75e4 in run_Rmainloop /home/hornik/src/R/src/main/main.c:1220:5 #13 0x7fa0ffbe785a in Rf_mainloop /home/hornik/src/R/src/main/main.c:1226:5 #14 0x556970276dd4 in main /home/hornik/src/R/src/main/Rmain.c:29:5 #15 0x7fa0fed4dd67 in __libc_start_call_main csu/../sysdeps/nptl/libc_start_call_main.h:58:16 #16 0x7fa0fed4de24 in __libc_start_main csu/../csu/libc-start.c:360:3 #17 0x556970193370 in _start (/home/hornik/tmp/R-d-clang-xtra/bin/exec/R+0x2b370) (BuildId: ce9a0af4806c342e07ea21f487bd9584f1fffacb) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior H5I.c:548:47 begin installing package ‘xcms’ make: *** [Makefile:795: xcms.ts] Error 1 make: Target 'all' not remade because of errors. * installing *source* package ‘xcms’ ... ** this is package ‘xcms’ version ‘4.4.0’ ** package ‘xcms’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeqvgpX/R.INSTALL36734e7b7f1dcf/xcms/src' rm -f massifquant/xcms_massifquant.o massifquant/TrMgr.o massifquant/Tracker.o massifquant/SegProc.o massifquant/DataKeeper.o massifquant/OpOverload.o obiwarp/mat.o obiwarp/vec.o obiwarp/xcms_dynprog.o obiwarp/xcms_lmat.o xcms_obiwarp.o fastMatch.o mzClust_hclust.o mzROI.o util.o xcms.o binners.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c massifquant/xcms_massifquant.cpp -o massifquant/xcms_massifquant.o massifquant/xcms_massifquant.cpp:62:9: error: use of undeclared identifier 'error' 62 | error("Error in scanrange \n"); | ^ massifquant/xcms_massifquant.cpp:115:26: error: use of undeclared identifier 'allocVector'; did you mean 'Rf_allocVector'? 115 | PROTECT(list_names = allocVector(STRSXP, N_NAMES)); | ^~~~~~~~~~~ | Rf_allocVector /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:388:31: note: expanded from macro 'PROTECT' 388 | #define PROTECT(s) Rf_protect(s) | ^ /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:1078:10: note: 'Rf_allocVector' declared here 1078 | SEXP Rf_allocVector(SEXPTYPE, R_xlen_t); | ^ massifquant/xcms_massifquant.cpp:117:40: error: use of undeclared identifier 'mkChar' 117 | SET_STRING_ELT(list_names, j, mkChar(names[j])); | ^ massifquant/xcms_massifquant.cpp:119:24: error: use of undeclared identifier 'allocVector'; did you mean 'Rf_allocVector'? 119 | PROTECT(peaklist = allocVector(VECSXP, busybody.getPicCounts())); | ^~~~~~~~~~~ | Rf_allocVector /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:388:31: note: expanded from macro 'PROTECT' 388 | #define PROTECT(s) Rf_protect(s) | ^ /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:1078:10: note: 'Rf_allocVector' declared here 1078 | SEXP Rf_allocVector(SEXPTYPE, R_xlen_t); | ^ massifquant/xcms_massifquant.cpp:125:29: error: use of undeclared identifier 'allocVector'; did you mean 'Rf_allocVector'? 125 | PROTECT(entrylist = allocVector(VECSXP, N_NAMES)); | ^~~~~~~~~~~ | Rf_allocVector /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:388:31: note: expanded from macro 'PROTECT' 388 | #define PROTECT(s) Rf_protect(s) | ^ /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:1078:10: note: 'Rf_allocVector' declared here 1078 | SEXP Rf_allocVector(SEXPTYPE, R_xlen_t); | ^ massifquant/xcms_massifquant.cpp:156:9: error: use of undeclared identifier 'setAttrib'; did you mean 'Rf_setAttrib'? 156 | setAttrib(entrylist, R_NamesSymbol, list_names); //attaching the vector names | ^~~~~~~~~ | Rf_setAttrib /home/hornik/tmp/R-d-clang-xtra/include/Rinternals.h:580:6: note: 'Rf_setAttrib' declared here 580 | SEXP Rf_setAttrib(SEXP, SEXP, SEXP); | ^ 6 errors generated. make[1]: *** [/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf:202: massifquant/xcms_massifquant.o] Error 1 make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeqvgpX/R.INSTALL36734e7b7f1dcf/xcms/src' ERROR: compilation failed for package ‘xcms’ * removing ‘/home/hornik/tmp/CRAN_special_clang-san/Library/xcms’ Warning in (function (pkgs, lib, repos = getOption("repos"), contriburl = contrib.url(repos, : installation of package ‘xcms’ failed Calls: -> do.call -> checking enviGCMS_0.7.4.tar.gz ... Depends: Package: enviGCMS Depends: R (>= 2.10) Imports: Rdisop, BiocParallel, grDevices, graphics, stats, utils, methods, animation (>= 2.2.3), RColorBrewer, mixtools, data.table, igraph Timings: user system elapsed enviGCMS 118.064 12.303 131.386 Results: Check status summary: ERROR Source packages 1 Check results summary: enviGCMS ... ERROR * checking dependencies in R code ... NOTE * checking examples ... [5s/5s] ERROR