* using log directory 'd:/RCompile/CRANincoming/R-devel/eligmodel.Rcheck'
* using R Under development (unstable) (2025-11-23 r89052 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'eligmodel/DESCRIPTION' ... OK
* this is package 'eligmodel' version '0.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Thomas Jemielita <thomas.jemielita@msd.com>'

New submission

Possibly misspelled words in DESCRIPTION:
  RShiny (17:95)
  RWD (14:81, 15:92)
  eligmodel (2:8, 14:18)

The Title field starts with the package name.
The Title field should be in title case. Current version is:
  'eligmodel: An R Package to Identify and Augment Trial-Eligible Patients in Real-World Data'
In title case that is:
  'Eligmodel: An R Package to Identify and Augment Trial-Eligible Patients in Real-World Data'

The Description field contains
  \url{https://pubmed.ncbi.nlm.nih.gov/34415774/}.
Please enclose URLs in angle brackets (<...>).
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'eligmodel' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Author field differs from that derived from Authors@R
  Author:    'Thomas Jemielita [aut, cre], Celeste McFarlane [ctb], Gleicy Macedo Hair [ctb], Lei Ai [ctb], Yipeng Gao [ctb], Wei Gao [ctb], Merck & Co., Inc. Rahway, NJ, USA and its affiliates [cph] (Copyright holder)'
  Authors@R: 'Thomas Jemielita (MSD) [aut, cre], Celeste McFarlane (Analysis Group) [ctb], Gleicy Macedo Hair (MSD) [ctb], Lei Ai (MSD) [ctb], Yipeng Gao (Analysis Group) [ctb], Wei Gao (Analysis Group) [ctb], Merck & Co., Inc. Rahway, NJ, USA and its affiliates [cph] (Copyright holder)'

Maintainer field differs from that derived from Authors@R
  Maintainer: 'Thomas Jemielita <thomas.jemielita@msd.com>'
  Authors@R:  'Thomas Jemielita (MSD) <thomas.jemielita@msd.com>'

* checking top-level files ... NOTE
File
  LICENSE
is not mentioned in the DESCRIPTION file.
Non-standard files/directories found at top level:
  'LICENSES_THIRD_PARTY' 'README.Rmd'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... WARNING
Found the following files with non-ASCII characters:
  R/Report.R
  R/home.R
Portable packages must use only ASCII characters in their R code and
NAMESPACE directives, except perhaps in comments.
Use \uxxxx escapes for other characters.
Function 'tools::showNonASCIIfile' can help in finding non-ASCII
characters in files.
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [18s] NOTE
baselineCharServer: no visible global function definition for
  'setNames'
eligProbServer : <anonymous>: no visible global function definition for
  'write.csv'
homeServer: no visible binding for global variable 'record_id'
homeServer: no visible binding for global variable 'trial'
homeServer: no visible binding for global variable 'rwd'
homeServer: no visible binding for global variable 'cohort'
homeServer: no visible global function definition for 'setNames'
Undefined global functions or variables:
  cohort record_id rwd setNames trial write.csv
Consider adding
  importFrom("stats", "setNames")
  importFrom("utils", "write.csv")
to your NAMESPACE file.

Found if() conditions comparing class() to string:
File 'eligmodel/R/plot_elig.R': if (class(fit) == "elig_model") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... [14s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 WARNING, 4 NOTEs