context("Loading functions") skip_on_cran() test_that("load_config()", { p <- load_config("yebsap-example") expect_is(p, "list") expect_true(all(c("bins", "bins_seasonal", "srd_pred_year") %in% names(p))) expect_error(load_config("Yellow Warbler")) expect_error(load_config("XXXX")) }) test_that("load_fac_map_parameters()", { p <- load_fac_map_parameters("yebsap-example") expect_is(p, "list") expect_named(p, c("custom_projection", "fa_extent", "res", "fa_extent_sinu", "weekly_bins", "weekly_labels", "seasonal_bins", "seasonal_labels")) # check components # projection expect_is(terra::crs(p$custom_projection), "character") # extent expect_is(p$fa_extent, "SpatExtent") # resolution expect_is(p$res, c("numeric", "integer")) # sinusoidal extent expect_is(p$fa_extent_sinu, "SpatExtent") # bins expect_is(p$weekly_bins, "numeric") expect_is(p$seasonal_bins, "numeric") expect_error(load_fac_map_parameters("Yellow Warbler")) expect_error(load_fac_map_parameters("XXXX")) }) test_that("list_available_pis()", { pis <- list_available_pis("yebsap-example") expect_is(pis, "data.frame") expect_true(all(c("predictor", "rangewide_rank", "rank") %in% names(pis))) expect_equal(nrow(pis), 5) expect_error(list_available_pis("Yellow Warbler")) expect_error(list_available_pis("XXXX")) }) test_that("load_pi()", { pi_occ <- load_pi("yebsap-example", predictor = "elevation_250m_median", response = "occurrence") expect_is(pi_occ, "SpatRaster") expect_equal(terra::nlyr(pi_occ), 52) pi_count <- load_pi("yebsap-example", predictor = "mcd12q1_lccs1_c22_pland", response = "count") expect_is(pi_count, "SpatRaster") expect_equal(terra::nlyr(pi_count), 52) expect_error(load_pi("Yellow Warbler")) expect_error(load_pi("XXXX")) expect_error(load_pi("yebsap-example", response = "abundance")) expect_error(load_pi("yebsap-example", predictor = "elevation_250m_sd")) }) test_that("load_ppm()", { ppm_spear <- load_ppm("yebsap-example", ppm = "abd_spearman") expect_is(ppm_spear, "SpatRaster") expect_equal(terra::nlyr(ppm_spear), 52) ppm_auc <- load_ppm("yebsap-example", ppm = "binary_pr_auc") expect_is(ppm_auc, "SpatRaster") expect_equal(terra::nlyr(ppm_auc), 52) expect_error(load_ppm("Yellow Warbler")) expect_error(load_ppm("XXXX")) expect_error(load_ppm("yebsap-example", ppm = "pr_auc")) expect_error(load_ppm("yebsap-example", ppm = "elevation_250m_sd")) })