* using log directory 'd:/RCompile/CRANincoming/R-devel/earth.Rcheck'
* using R Under development (unstable) (2024-02-19 r85946 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'earth/DESCRIPTION' ... OK
* this is package 'earth' version '5.3.3'
* checking CRAN incoming feasibility ... [27s] NOTE
Maintainer: 'Stephen Milborrow <milbo@sonic.net>'

Found the following (possibly) invalid URLs:
  URL: https://biostat.app.vumc.org/wiki/pub/Main/DataSets/titanic3info.txt
    From: man/etitanic.Rd
    Status: Error
    Message: Recv failure: Connection was reset
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'earth' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 12.3.0'
* used Fortran compiler: 'GNU Fortran (GCC) 12.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
earth:
  function(...)
earth.regress:
  function(x, y, weights, used.cols)

earth:
  function(...)
earth.glm:
  function(bx, y, weights, na.action, offset, glm.arg, trace,
           is.bpairs, env)

varmod:
  function(parent, method, exponent, conv, clamp, minspan, trace, x, y,
           model.var, ...)
varmod.internal:
  function(parent, method, exponent, conv, clamp, minspan, trace,
           parent.x, parent.y, model.var, ...)

expand.bpairs:
  function(...)
expand.bpairs.aux:
  function(x, y, sort)

reorder:
  function(x, ...)
reorder.terms.anova:
  function(dirs, cuts)

predict:
  function(object, ...)
predict.cint:
  function(object, newdata, level)

predict:
  function(object, ...)
predict.pint:
  function(object, newdata, level)

predict:
  function(object, ...)
predict.se:
  function(object, newdata)

predict:
  function(object, ...)
predict.abs.residual:
  function(object, newdata)

hatvalues:
  function(model, ...)
hatvalues.qr:
  function(qr, maxmem, trace)

hatvalues:
  function(model, ...)
hatvalues.qr.wrapper:
  function(qr, maxmem, trace)

update:
  function(object, ...)
update.trace.tab:
  function(trace.tab, trace, iter, max.iter, residmod, varmod, coef,
           coef.change, parent.y, weights, exponent)

update:
  function(object, ...)
update.lambda.factor:
  function(lambda, trace)

sort:
  function(x, decreasing, ...)
sort.unique:
  function(x)

format:
  function(x, ...)
format.one.response:
  function(iresp, object, digits, use.names, decomp, style, colon.char,
           coefs)

min:
  function(..., na.rm)
min.sd.line:
  function(object, min.sd.col, lwd)

Apparent methods for exported generics not registered:
  earth.cv earth.fit earth.glm earth.regress expand.bpairs.aux
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [21s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... OK
  Running 'test.earth.R'
  Comparing 'test.earth.Rout' to 'test.earth.Rout.save' ... OK
* checking PDF version of manual ... [14s] OK
* checking HTML version of manual ... OK
* DONE
Status: 2 NOTEs