R Under development (unstable) (2024-10-01 r87205 ucrt) -- "Unsuffered Consequences"
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Platform: x86_64-w64-mingw32/x64

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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(eDNAjoint)
> 
> test_check("eDNAjoint")

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000574 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 5.74 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
Chain 1: 
Chain 1: Iteration:  1 / 100 [  1%]  (Warmup)
Chain 1: Iteration: 26 / 100 [ 26%]  (Sampling)
Chain 1: Iteration: 100 / 100 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 0.647 seconds (Warm-up)
Chain 1:                1.931 seconds (Sampling)
Chain 1:                2.578 seconds (Total)
Chain 1: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000963 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 9.63 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
Chain 1: 
Chain 1: Iteration:  1 / 100 [  1%]  (Warmup)
Chain 1: Iteration: 26 / 100 [ 26%]  (Sampling)
Chain 1: Iteration: 100 / 100 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 1.099 seconds (Warm-up)
Chain 1:                2.509 seconds (Sampling)
Chain 1:                3.608 seconds (Total)
Chain 1: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000126 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 1.26 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
Chain 1: 
Chain 1: Iteration:  1 / 100 [  1%]  (Warmup)
Chain 1: Iteration: 26 / 100 [ 26%]  (Sampling)
Chain 1: Iteration: 100 / 100 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 0.465 seconds (Warm-up)
Chain 1:                1.384 seconds (Sampling)
Chain 1:                1.849 seconds (Total)
Chain 1: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000627 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 6.27 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: WARNING: There aren't enough warmup iterations to fit the
Chain 1:          three stages of adaptation as currently configured.
Chain 1:          Reducing each adaptation stage to 15%/75%/10% of
Chain 1:          the given number of warmup iterations:
Chain 1:            init_buffer = 3
Chain 1:            adapt_window = 20
Chain 1:            term_buffer = 2
Chain 1: 
Chain 1: Iteration:  1 / 100 [  1%]  (Warmup)
Chain 1: Iteration: 26 / 100 [ 26%]  (Sampling)
Chain 1: Iteration: 100 / 100 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 0.544 seconds (Warm-up)
Chain 1:                2.431 seconds (Sampling)
Chain 1:                2.975 seconds (Total)
Chain 1: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.00092 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 9.2 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 1: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 1: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 1: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 1: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 1: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 1: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 1: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 4.931 seconds (Warm-up)
Chain 1:                15.829 seconds (Sampling)
Chain 1:                20.76 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.000847 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 8.47 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 2: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 2: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 2: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 2: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 2: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 2: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 2: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 4.841 seconds (Warm-up)
Chain 2:                16.118 seconds (Sampling)
Chain 2:                20.959 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 0.000707 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 7.07 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3: 
Chain 3: 
Chain 3: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 3: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 3: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 3: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 3: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 3: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 3: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 3: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 3: 
Chain 3:  Elapsed Time: 5.041 seconds (Warm-up)
Chain 3:                16.342 seconds (Sampling)
Chain 3:                21.383 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 4).
Chain 4: 
Chain 4: Gradient evaluation took 0.000751 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 7.51 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4: 
Chain 4: 
Chain 4: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 4: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 4: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 4: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 4: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 4: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 4: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 4: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 4: 
Chain 4:  Elapsed Time: 4.604 seconds (Warm-up)
Chain 4:                16.168 seconds (Sampling)
Chain 4:                20.772 seconds (Total)
Chain 4: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000742 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 7.42 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 1: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 1: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 1: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 1: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 1: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 1: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 1: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 4.927 seconds (Warm-up)
Chain 1:                15.894 seconds (Sampling)
Chain 1:                20.821 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.000531 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 5.31 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 2: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 2: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 2: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 2: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 2: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 2: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 2: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 4.491 seconds (Warm-up)
Chain 2:                15.161 seconds (Sampling)
Chain 2:                19.652 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 0.000751 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 7.51 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3: 
Chain 3: 
Chain 3: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 3: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 3: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 3: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 3: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 3: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 3: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 3: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 3: 
Chain 3:  Elapsed Time: 4.754 seconds (Warm-up)
Chain 3:                15.913 seconds (Sampling)
Chain 3:                20.667 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 4).
Chain 4: 
Chain 4: Gradient evaluation took 0.00075 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 7.5 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4: 
Chain 4: 
Chain 4: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 4: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 4: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 4: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 4: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 4: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 4: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 4: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 4: 
Chain 4:  Elapsed Time: 4.652 seconds (Warm-up)
Chain 4:                15.958 seconds (Sampling)
Chain 4:                20.61 seconds (Total)
Chain 4: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000876 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 8.76 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 1: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 1: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 1: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 1: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 1: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 1: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 1: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 5.387 seconds (Warm-up)
Chain 1:                28.346 seconds (Sampling)
Chain 1:                33.733 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.000933 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 9.33 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 2: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 2: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 2: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 2: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 2: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 2: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 2: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 5.584 seconds (Warm-up)
Chain 2:                17.21 seconds (Sampling)
Chain 2:                22.794 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 0.000785 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 7.85 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3: 
Chain 3: 
Chain 3: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 3: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 3: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 3: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 3: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 3: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 3: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 3: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 3: 
Chain 3:  Elapsed Time: 5.246 seconds (Warm-up)
Chain 3:                27.206 seconds (Sampling)
Chain 3:                32.452 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'joint_binary_cov_pois' NOW (CHAIN 4).
Chain 4: 
Chain 4: Gradient evaluation took 0.000751 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 7.51 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4: 
Chain 4: 
Chain 4: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 4: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 4: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 4: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 4: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 4: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 4: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 4: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 4: 
Chain 4:  Elapsed Time: 5.782 seconds (Warm-up)
Chain 4:                17.626 seconds (Sampling)
Chain 4:                23.408 seconds (Total)
Chain 4: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.002538 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 25.38 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 1: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 1: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 1: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 1: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 1: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 1: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 1: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 16.291 seconds (Warm-up)
Chain 1:                51.444 seconds (Sampling)
Chain 1:                67.735 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.002657 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 26.57 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 2: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 2: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 2: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 2: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 2: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 2: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 2: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 16.154 seconds (Warm-up)
Chain 2:                52.599 seconds (Sampling)
Chain 2:                68.753 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 0.001906 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 19.06 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3: 
Chain 3: 
Chain 3: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 3: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 3: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 3: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 3: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 3: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 3: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 3: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 3: 
Chain 3:  Elapsed Time: 17.652 seconds (Warm-up)
Chain 3:                51.119 seconds (Sampling)
Chain 3:                68.771 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL 'joint_binary_negbin' NOW (CHAIN 4).
Chain 4: 
Chain 4: Gradient evaluation took 0.002263 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 22.63 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4: 
Chain 4: 
Chain 4: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 4: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 4: Iteration:  501 / 3000 [ 16%]  (Sampling)
Chain 4: Iteration: 1000 / 3000 [ 33%]  (Sampling)
Chain 4: Iteration: 1500 / 3000 [ 50%]  (Sampling)
Chain 4: Iteration: 2000 / 3000 [ 66%]  (Sampling)
Chain 4: Iteration: 2500 / 3000 [ 83%]  (Sampling)
Chain 4: Iteration: 3000 / 3000 [100%]  (Sampling)
Chain 4: 
Chain 4:  Elapsed Time: 15.866 seconds (Warm-up)
Chain 4:                50.889 seconds (Sampling)
Chain 4:                66.755 seconds (Total)
Chain 4: 
Refer to the eDNAjoint guide for visualization tips:  https://bookdown.org/abigailkeller/eDNAjoint_vignette/tips.html#visualization-tips 

SAMPLING FOR MODEL 'joint_binary_pois' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.000674 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 6.74 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 3000 [  0%]  (Warmup)
Chain 1: Iteration:  500 / 3000 [ 16%]  (Warmup)
Chain 1: Iteration:  501 / 3000 [ 16%]  (Sampling)
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