* using log directory ‘/srv/hornik/tmp/CRAN_pretest/dsTidyverse.Rcheck’ * using R Under development (unstable) (2024-10-10 r87224) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘dsTidyverse/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘dsTidyverse’ version ‘1.0.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/5s] NOTE Maintainer: ‘Tim Cadman ’ New submission Possibly misspelled words in DESCRIPTION: DataSHIELD (3:8, 25:14) Serverside (3:29) Tidyverse (3:19, 25:54) serverside (25:25) Suggests or Enhances not in mainstream repositories: dsBaseClient, dsBase Availability using Additional_repositories specification: dsBaseClient yes https://cran.obiba.org/ dsBase yes https://cran.obiba.org/ Found the following (possibly) invalid URLs: URL: https://circleci.com/gh/molgenis/ds-tidyverse-client (moved to https://app.circleci.com/pipelines/github/molgenis/ds-tidyverse-client) From: README.md Status: 301 Message: Moved Permanently For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. * checking package namespace information ... OK * checking package dependencies ... INFO Packages suggested but not available for checking: 'dsBaseClient', 'dsBase' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... WARNING Found the following files with non-portable file names: CONTRIBUTING 2.md NEWS 2.md R/bindRowsDS 2.R cran-comments 2.md These are not fully portable file names. See section ‘Package structure’ in the ‘Writing R Extensions’ manual. * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘dsTidyverse’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard files/directories found at top level: ‘CONTRIBUTING 2.md’ ‘NEWS 2.md’ ‘cran-comments 2.md’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [5s/5s] OK Running ‘testthat.R’ [5s/5s] * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 2 NOTEs