#------------------------------------------------------------------------------- # Copyright (c) 2019-2022 University of Newcastle upon Tyne. All rights reserved. # # This program and the accompanying materials # are made available under the terms of the GNU Public License v3.0. # # You should have received a copy of the GNU General Public License # along with this program. If not, see . #------------------------------------------------------------------------------- # # Set up # context("ds.testObjExists::smk::setup") connect.studies.dataset.cnsim(list("LAB_TSC", "LAB_HDL")) test_that("setup", { ds_expect_variables(c("D")) }) # # Tests # context("ds.testObjExists::smk") test_that("simple testObjExists", { res <- ds.testObjExists('D') expect_length(res, 1) expect_equal(res$return.message, "A valid copy of data object exists in all specified data sources") }) test_that("data.frame testObjExists", { myvectors <- c('D$LAB_TSC', 'D$LAB_HDL') ds.dataFrame(x=myvectors) res <- ds.testObjExists("dataframe.newobj") expect_length(res, 1) expect_equal(res$return.message, "A valid copy of data object exists in all specified data sources") }) test_that("data.frame testObjExists", { res <- ds.testObjExists("D$TEST") expect_length(res, 2) expect_length(res$return.info, 3) expect_length(res$return.info$sim1, 2) expect_false(res$return.info$sim1$test.obj.exists) expect_true(is.null(res$return.info$sim1$test.obj.class)) expect_length(res$return.info$sim2, 2) expect_false(res$return.info$sim2$test.obj.exists) expect_true(is.null(res$return.info$sim2$test.obj.class)) expect_length(res$return.info$sim3, 2) expect_false(res$return.info$sim3$test.obj.exists) expect_true(is.null(res$return.info$sim3$test.obj.class)) expect_length(res$return.info, 3) expect_length(res$return.info, 3) expect_length(res$return.message, 2) expect_length(res$return.message[[1]], 1) expect_equal(res$return.message[[1]], "Error: A valid data object does NOT exist in ALL specified data sources") expect_length(res$return.message[[2]], 1) expect_equal(res$return.message[[2]], "It is either ABSENT and/or has no valid content/class, for details see return.info above") }) test_that("data.frame testObjExists", { res <- ds.testObjExists("TEST") expect_length(res, 2) expect_length(res$return.info, 3) expect_length(res$return.info$sim1, 2) expect_false(res$return.info$sim1$test.obj.exists) expect_true(is.null(res$return.info$sim1$test.obj.class)) expect_length(res$return.info$sim2, 2) expect_false(res$return.info$sim2$test.obj.exists) expect_true(is.null(res$return.info$sim2$test.obj.class)) expect_length(res$return.info$sim3, 2) expect_false(res$return.info$sim3$test.obj.exists) expect_true(is.null(res$return.info$sim3$test.obj.class)) expect_length(res$return.info, 3) expect_length(res$return.info, 3) expect_length(res$return.message, 2) expect_length(res$return.message[[1]], 1) expect_equal(res$return.message[[1]], "Error: A valid data object does NOT exist in ALL specified data sources") expect_length(res$return.message[[2]], 1) expect_equal(res$return.message[[2]], "It is either ABSENT and/or has no valid content/class, for details see return.info above") }) # # Done # context("ds.testObjExists::smk::shutdown") test_that("shutdown", { ds_expect_variables(c("D", "dataframe.newobj")) }) disconnect.studies.dataset.cnsim() context("ds.testObjExists::smk::done")