#------------------------------------------------------------------------------- # Copyright (c) 2019-2022 University of Newcastle upon Tyne. All rights reserved. # # This program and the accompanying materials # are made available under the terms of the GNU Public License v3.0. # # You should have received a copy of the GNU General Public License # along with this program. If not, see . #------------------------------------------------------------------------------- # # Set up # context("ds.table2D::smk::setup") connect.studies.dataset.cnsim(list("DIS_DIAB", "GENDER")) test_that("setup", { ds_expect_variables(c("D")) }) # # Tests # context("ds.table2D::smk") test_that("simple table2D", { table2D.res <- expect_warning(ds.table2D(x='D$DIS_DIAB', y='D$GENDER'), "'ds.table2D' is deprecated.\nUse 'ds.table' instead.", fixed = TRUE) expect_length(table2D.res, 9) expect_length(table2D.res$colPercent, 3) expect_length(table2D.res$colPercent$`sim1-D`, 3) expect_length(table2D.res$colPercent$`sim2-D`, 3) expect_length(table2D.res$colPercent$`sim3-D`, 3) expect_length(table2D.res$colPercent.all.studies, 1) expect_length(table2D.res$rowPercent, 3) expect_length(table2D.res$rowPercent$`sim1-D`, 3) expect_length(table2D.res$rowPercent$`sim2-D`, 3) expect_length(table2D.res$rowPercent$`sim3-D`, 3) expect_length(table2D.res$rowPercent.all.studies, 1) expect_length(table2D.res$chi2Test, 3) expect_length(table2D.res$chi2Test$`sim1-D`, 9) expect_length(table2D.res$chi2Test$`sim2-D`, 9) expect_length(table2D.res$chi2Test$`sim3-D`, 9) expect_length(table2D.res$chi2Test.all.studies, 1) expect_length(table2D.res$counts, 3) expect_length(table2D.res$counts$`sim1-D`, 3) expect_length(table2D.res$counts$`sim2-D`, 3) expect_length(table2D.res$counts$`sim3-D`, 3) expect_length(table2D.res$counts.all.studies, 1) expect_equal(table2D.res$validity, "All tables are valid!", fixed=TRUE) }) # # Done # context("ds.table2D::smk::shutdown") test_that("shutdown", { ds_expect_variables(c("D")) }) disconnect.studies.dataset.cnsim() context("ds.table2D::smk::done")