#------------------------------------------------------------------------------- # Copyright (c) 2018-2022 University of Newcastle upon Tyne. All rights reserved. # # This program and the accompanying materials # are made available under the terms of the GNU Public License v3.0. # # You should have received a copy of the GNU General Public License # along with this program. If not, see . #------------------------------------------------------------------------------- # # Set up # context("ds.merge::smk::setup") connect.studies.dataset.cnsim(list("LAB_TSC", "LAB_TRIG", "LAB_HDL", "DIS_CVA", "DIS_AMI")) test_that("setup", { ds_expect_variables(c("D")) }) # # Tests # context("ds.merge::smk") test_that("simple test", { spec_vectors_1 <- c('D$LAB_TSC', 'D$LAB_HDL') spec_vectors_2 <- c('D$LAB_TSC', 'D$DIS_AMI') ds.dataFrame(x=spec_vectors_1, newobj="test_1_df") ds.dataFrame(x=spec_vectors_2, newobj="test_2_df") res <- ds.merge(x.name="test_1_df", y.name="test_2_df", by.x.names="LAB_TSC", by.y.names="LAB_TSC", newobj="merge_newobj") expect_length(res, 2) expect_equal(res$is.object.created, "A data object has been created in all specified data sources") expect_equal(res$validity.check, " appears valid in all sources") class.res <- ds.class("merge_newobj") expect_length(class.res, 3) expect_equal(class.res$sim1, "data.frame") expect_equal(class.res$sim2, "data.frame") expect_equal(class.res$sim3, "data.frame") }) # # Done # context("ds.merge::smk::shutdown") test_that("shutdown", { ds_expect_variables(c("D", "test_1_df", "test_2_df", "merge_newobj")) }) disconnect.studies.dataset.cnsim() context("ds.merge::smk::done")