#------------------------------------------------------------------------------- # Copyright (c) 2019-2022 University of Newcastle upon Tyne. All rights reserved. # Copyright (c) 2022 Arjuna Technologies, Newcastle upon Tyne. All rights reserved. # # This program and the accompanying materials # are made available under the terms of the GNU Public License v3.0. # # You should have received a copy of the GNU General Public License # along with this program. If not, see . #------------------------------------------------------------------------------- # # Set up # context("ds.subset::discctrl::setup") connect.studies.dataset.cnsim(list("DIS_DIAB","PM_BMI_CONTINUOUS","LAB_HDL", "GENDER")) test_that("setup", { ds_expect_variables(c("D")) }) # # Tests # context("ds.subset::discctrl") test_that("simple subset", { expect_error(expect_warning(ds.subset(datasources=ds.test_env$connections, subset='subD', x='D', rows=c(1:50), cols=c(1,2)), "", fixed = TRUE), "There are some DataSHIELD errors, list them with datashield.errors()", fixed = TRUE) res_errors <- DSI::datashield.errors() expect_length(res_errors, 1) expect_length(res_errors$sim1, 1) expect_equal(res_errors$sim1, "Command 'subsetDS(\"D\", FALSE, 1:50, c(1, 2))' failed on 'sim1': Error while evaluating 'is.null(base::assign('subD', value={dsBase::subsetDS(\"D\", FALSE, 1:50, dsBase::vectorDS(1, 2))}))' -> Error in checkPermissivePrivacyControlLevel() : \n BLOCKED: The server is running in 'non-permissive' mode which has caused this method to be blocked\n", fixed = TRUE) }) # # Done # context("ds.subset::discctrl::shutdown") test_that("shutdown", { ds_expect_variables(c("D")) }) disconnect.studies.dataset.cnsim() context("ds.subset::discctrl::done")