downloading reverse dependencies ... downloading monolix2rx_0.0.2.tar.gz ... ok downloading nonmem2rx_0.1.5.tar.gz ... ok downloading rxode2_3.0.1.tar.gz ... ok installing dependencies ‘dparser’, ‘lixoftConnectors’, ‘NMdata’, ‘nonmem2R’, ‘nonmemica’, ‘xgxr’ Warning: package ‘lixoftConnectors’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘encode’, ‘csv’, ‘spec’, ‘metaplot’ begin installing package ‘encode’ begin installing package ‘xgxr’ begin installing package ‘csv’ begin installing package ‘NMdata’ begin installing package ‘nonmem2R’ begin installing package ‘dparser’ * installing *source* package ‘encode’ ... ** package ‘encode’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (encode) begin installing package ‘metaplot’ * installing *source* package ‘csv’ ... ** package ‘csv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (csv) begin installing package ‘spec’ * installing *source* package ‘spec’ ... ** package ‘spec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spec) * installing *source* package ‘nonmem2R’ ... ** package ‘nonmem2R’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmem2R) * installing *source* package ‘metaplot’ ... ** package ‘metaplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaplot) begin installing package ‘nonmemica’ * installing *source* package ‘NMdata’ ... ** package ‘NMdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NMdata) * installing *source* package ‘dparser’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeA0JrX/R.INSTALL301075b70bfbe/dparser/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dparser.c -o dparser.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dsymtab.c -o dsymtab.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gram.c -o gram.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c grammar.g.c -o grammar.g.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lex.c -o lex.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lr.c -o lr.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mkdparse.c -o mkdparse.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mkdparser.c -o mkdparser.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c parse.c -o parse.o In file included from d.h:109, from parse.c:5: parse.c: In function ‘new_ZNode’: parse.h:152:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 152 | #define znode_next(_z) (*(ZNode **)&((_z)->pn)) | ^~~~~~~~~~~~~~~~~~~~~ parse.c:225:22: note: in expansion of macro ‘znode_next’ 225 | p->free_znodes = znode_next(z); | ^~~~~~~~~~ parse.c: In function ‘free_ZNode’: parse.h:152:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 152 | #define znode_next(_z) (*(ZNode **)&((_z)->pn)) | ^~~~~~~~~~~~~~~~~~~~~ parse.c:268:3: note: in expansion of macro ‘znode_next’ 268 | znode_next(z) = p->free_znodes; | ^~~~~~~~~~ parse.c: In function ‘free_parser_working_data’: parse.h:152:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 152 | #define znode_next(_z) (*(ZNode **)&((_z)->pn)) | ^~~~~~~~~~~~~~~~~~~~~ parse.c:436:17: note: in expansion of macro ‘znode_next’ 436 | ZNode *zn = znode_next(p->free_znodes); | ^~~~~~~~~~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rdparse.c -o rdparse.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c read_binary.c -o read_binary.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c scan.c -o scan.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c version.c -o version.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DUSE_FREELISTS -DTRACK_PNODES -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c write_tables.c -o write_tables.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o dparser.so dparser.o dsymtab.o gram.o grammar.g.o lex.o lr.o mkdparse.o mkdparser.o parse.o rdparse.o read_binary.o scan.o util.o version.o write_tables.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeA0JrX/R.INSTALL301075b70bfbe/dparser/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dparser/00new/dparser ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dparser) * installing *source* package ‘xgxr’ ... ** package ‘xgxr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xgxr) * installing *source* package ‘nonmemica’ ... ** package ‘nonmemica’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmemica) checking dparser_1.3.1-13.tar.gz ... checking monolix2rx_0.0.2.tar.gz ... checking nonmem2rx_0.1.5.tar.gz ... checking rxode2_3.0.1.tar.gz ... Depends: Package: dparser Depends: R (>= 3.3) Imports: digest, methods Timings: user system elapsed dparser 28.175 4.446 33.686 Results: Check status summary: OK Source packages 1 Reverse depends 3 Check results summary: dparser ... OK rdepends_monolix2rx ... OK rdepends_nonmem2rx ... OK rdepends_rxode2 ... OK