* installing *source* package 'dodgr' ... ** using staged installation ** libs using C++ compiler: 'g++.exe (GCC) 13.2.0' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c heaps/bheap.cpp -o heaps/bheap.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c heaps/fheap.cpp -o heaps/fheap.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c heaps/heap23.cpp -o heaps/heap23.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c heaps/triheap_ext.cpp -o heaps/triheap_ext.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c heaps/triheap.cpp -o heaps/triheap.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c centrality.cpp -o centrality.o In file included from D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/TinyThread.h:7, from D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel.h:6, from run_sp.h:13, from centrality.cpp:1: D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/Common.h: In instantiation of 'int RcppParallel::resolveValue(const char*, T, U) [with T = long long unsigned int; U = int]': D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel.h:57:28: required from 'void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = OneCentralityEdge; std::size_t = long long unsigned int]' centrality.cpp:452:38: required from here D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'int' [-Wsign-compare] 16 | if (requestedValue != defaultValue && requestedValue > 0) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c concaveman.cpp -o concaveman.o In file included from concaveman.cpp:1: concaveman.h: In function 'std::array findCandidate(const rtree >&, const std::array&, const std::array&, const std::array&, const std::array&, T, const rtree >::ptr_type>&, bool&)': concaveman.h:694:38: warning: typedef 'circ_elem_type' locally defined but not used [-Wunused-local-typedefs] 694 | typedef CircularElement> circ_elem_type; | ^~~~~~~~~~~~~~ concaveman.cpp: In function 'Rcpp::DataFrame rcpp_concaveman(Rcpp::DataFrame, Rcpp::NumericVector, double, double)': concaveman.cpp:16:24: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare] 16 | for (auto i = 0; i < num_points; i++) { | ~~^~~~~~~~~~~~ concaveman.cpp:27:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long long unsigned int'} [-Wsign-compare] 27 | for (int i = 0; i < concave_points.size (); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c deduplicate.cpp -o deduplicate.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dgraph.cpp -o dgraph.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pathfinders.cpp -o pathfinders.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dodgr-to-sf.cpp -o dodgr-to-sf.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c flows.cpp -o flows.o flows.cpp: In member function 'virtual void OneAggregatePaired::operator()(size_t, size_t)': flows.cpp:322:51: warning: comparison of integer expressions of different signedness: 'long int' and 'const size_t' {aka 'const long long unsigned int'} [-Wsign-compare] 322 | if (target < 0L || target == from_i) | ~~~~~~~^~~~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/TinyThread.h:7, from D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel.h:6, from run_sp.h:13, from flows.cpp:2: D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/Common.h: In instantiation of 'int RcppParallel::resolveValue(const char*, T, U) [with T = long long unsigned int; U = int]': D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel.h:57:28: required from 'void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = OneAggregate; std::size_t = long long unsigned int]' flows.cpp:742:34: required from here D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: 'long long unsigned int' and 'int' [-Wsign-compare] 16 | if (requestedValue != defaultValue && requestedValue > 0) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fund-cycles.cpp -o fund-cycles.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c graph-contract.cpp -o graph-contract.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c graph.cpp -o graph.o graph.cpp: In function 'Rcpp::List rcpp_get_component_vector(const Rcpp::DataFrame&)': graph.cpp:198:10: warning: variable 'has_times' set but not used [-Wunused-but-set-variable] 198 | bool has_times = graph::graph_from_df (graph, vertices, edge_map, vert2edge_map); | ^~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c graph-sample.cpp -o graph-sample.o graph-sample.cpp: In function 'Rcpp::StringVector rcpp_sample_graph(Rcpp::DataFrame, size_t)': graph-sample.cpp:109:10: warning: variable 'has_times' set but not used [-Wunused-but-set-variable] 109 | bool has_times = graph::graph_from_df (graph, vertices, edge_map, vert2edge_map); | ^~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c match-points.cpp -o match-points.o match-points.cpp: In member function 'virtual void OneEdgeIndex::operator()(std::size_t, std::size_t)': match-points.cpp:99:17: warning: variable 'which_side' set but not used [-Wunused-but-set-variable] 99 | int which_side = INFINITE_INT; | ^~~~~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c run_sp.cpp -o run_sp.o run_sp.cpp: In member function 'virtual void OneIso::operator()(std::size_t, std::size_t)': run_sp.cpp:350:28: warning: unused variable 'st_prev' [-Wunused-variable] 350 | size_t st_prev = static_cast (prev [j]); | ^~~~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c run_sp_categorical.cpp -o run_sp_categorical.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sc-as-network.cpp -o sc-as-network.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sf-as-network.cpp -o sf-as-network.o g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppThread/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c turn_penalty.cpp -o turn_penalty.o g++ -std=gnu++17 -shared -s -static-libgcc -o dodgr.dll tmp.def heaps/bheap.o heaps/fheap.o heaps/heap23.o heaps/triheap_ext.o heaps/triheap.o centrality.o concaveman.o deduplicate.o dgraph.o pathfinders.o dodgr-to-sf.o flows.o fund-cycles.o graph-contract.o graph.o graph-sample.o match-points.o RcppExports.o run_sp.o run_sp_categorical.o sc-as-network.o sf-as-network.o turn_penalty.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-dodgr/00new/dodgr/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dodgr)