Package check result: ERROR Check: examples, Result: ERROR Running examples in ‘divest-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: readDicom > ### Title: Read one or more DICOM directories > ### Aliases: readDicom convertDicom sortDicom scanDicom > > ### ** Examples > > path <- system.file("extdata", "raw", package="divest") > scanDicom(path) [dcm2niix info] Found 4 DICOM file(s) label 1 T0_N_S8 2 T0_N_S9 rootPath 1 /home/hornik/tmp/CRAN_special_clang-san/divest.Rcheck/divest/extdata/raw 2 /home/hornik/tmp/CRAN_special_clang-san/divest.Rcheck/divest/extdata/raw files seriesNumber seriesDescription patientName studyDate echoTime 1 2 8 DTIb3000s5 112.00 2 2 9 fl3D_t1_sag 4.94 repetitionTime echoNumber phase diffusion 1 4100 NA FALSE TRUE 2 11 NA FALSE FALSE > readDicom(path, interactive=FALSE) [dcm2niix info] Found 4 DICOM file(s) [dcm2niix WARNING] Unable to determine manufacturer (0008,0070), so conversion is not tuned for vendor. [dcm2niix WARNING] All images appear to be a single slice - please check slice/vector orientation [dcm2niix WARNING] This diffusion series does not have a B0 (reference) volume [dcm2niix info] Convert 2 DICOM as /home/hornik/tmp/scratch/RtmpNoZFon/working_dir/RtmpbVrPst/divest_1250384_2/T0_N_S8 (96x96x1x2) [dcm2niix WARNING] Unable to determine manufacturer (0008,0070), so conversion is not tuned for vendor. [dcm2niix info] Convert 2 DICOM as /home/hornik/tmp/scratch/RtmpNoZFon/working_dir/RtmpbVrPst/divest_1250384_2/T0_N_S9 (224x256x2x1) [[1]] Internal image: "T0_N_S8" - 96 x 96 x 1 x 2 voxels - 2.5 x 2.5 x 5 mm x 4.1 s per voxel [[2]] Internal image: "T0_N_S9" - 2 x 224 x 256 voxels - 1 x 1 x 1 mm per voxel > > > > base::assign(".dptime", (proc.time() - get(".ptime", pos = "CheckExEnv")), pos = "CheckExEnv") > base::cat("readDicom", base::get(".format_ptime", pos = 'CheckExEnv')(get(".dptime", pos = "CheckExEnv")), "\n", file=base::get(".ExTimings", pos = 'CheckExEnv'), append=TRUE, sep="\t") > ### *